Starred repositories
GLEAMS is a Learned Embedding for Annotating Mass Spectra.
scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.
A Python library that helps data scientists to infer causation rather than observing correlation.
Python framework for Deep Learning in Proteomics
C++ Library Manager for Windows, Linux, and MacOS
A curated list of awesome C++ (or C) frameworks, libraries, resources, and shiny things. Inspired by awesome-... stuff.
A unifying framework for biomedical research knowledge graphs
Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python.
AminAlam / fa2_modified
Forked from bhargavchippada/forceatlas2Fastest Gephi's ForceAtlas2 graph layout algorithm implemented for Python and NetworkX
User-friendly, header-only, C++14 wrapper for HDF5.
A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly
open-source feature selection repository in python
Development repository for the Bioconductor package 'mixOmics '
Companion webpage to the book "Mathematics For Machine Learning"
Multiple trajectory alignment of time-series data
Build GUI for your Python program with JavaScript, HTML, and CSS
⚡ TabPFN: Foundation Model for Tabular Data ⚡
mRMR (minimum-Redundancy-Maximum-Relevance) for automatic feature selection at scale.
Feature engineering and selection open-source Python library compatible with sklearn.
Draw datasets from within Python notebooks.
ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to allow a continuous, easy, and controlled comparison of prot…