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@Plant-Food-Research-Open

Plant-Food-Research-Open

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  1. assemblyqc assemblyqc Public

    A Nextflow pipeline for evaluating assembly quality

    Nextflow 41 9

  2. calisim calisim Public

    A toolbox for the calibration and evaluation of simulation models.

    Python 22 3

  3. MCHap MCHap Public

    Polyploid micro-haplotype assembly using Markov chain Monte Carlo simulation.

    Python 20 3

  4. genepal genepal Public

    A Nextflow pipeline for genome and pan-genome annotation

    Nextflow 16 7

  5. moiraine moiraine Public

    An R package to construct Multi-Omics Integration Reproducible Analyses in R.

    R 14 3

  6. TEgenomeSimulator TEgenomeSimulator Public

    TEgenomeSimulator: A tool to simulate TE mutation and insertion into a random-synthesised or user-provided genome.

    Python 7 2

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