Tags · deepomicslab/SpecHLA

v1.0.12

Merge pull request #73 from jonasscheid/fix-zless-noninteractive

Replace zless with zcat for non-interactive VCF filtering

readme

Merge pull request #71 from jonasscheid/bioconda-packaging

Fix source builtin error and document conda wrapper commands

Merge pull request #69 from jonasscheid/bioconda-packaging

Add conda/bioconda packaging support

support for latest IMGT db by adding unzip

Added logic to check for the existence of the HLA fasta file and unzip if necessary.

Update README.MD

readme

add select_reference.py: sort the mapped allele based on the depth, w…

…e can construct sample-specific reference

fix the bug in read name recognition

clarify interpret output

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