R package: A state-of-the-art Vegetation Phenology extraction package, phenofit
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Oct 15, 2025 - R
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R package: A state-of-the-art Vegetation Phenology extraction package, phenofit
A Bayesian hierarchical model that quantifies long-term annual land surface phenology from sparse time series of vegetation indices.
R package: Extract Remote Sensing Vegetation Phenology by TIMESAT V3.3 Fortran library (only for windows)
A final production version of the DDRP platform that includes cohorts, parallel processing, and improving mapping routines. The objective of the Degree-Day, establishment Risk, and Pest event mapping system (DDRP) is to predict phenology and climate suitability of invasive, biocontrol, and IPM species for the conterminous United States. DDRP is …
Evaluation tools for assessing climate adaptation of fruit tree species
An updated version of the DDRP platform (from v2) that uses newer R packages ("terra" and "sf"). The objective of the Degree-Day, establishment Risk, and Pest event mapping system (DDRP) is to predict phenology and climate suitability of invasive, biocontrol, and IPM species for the conterminous United States.
PhenoCam Lab for BIOL 368
Build and analyze temporal ecological networks from species phenology data in R
Ecological and Environmental Sciences Honours Dissertation work by Erica Zaja, 2021. Supervised by Dr Isla Myers Smith and Team Shrub.
R, Python and JavaScript code for the the National Ecological Observatory Network’s Airborne Observation Platform (AOP) sampling design and publication, "Spanning Scales: The Airborne Spatial and Temporal Sampling Design of the National Ecological Observatory Network"
A package for backcalculating first egg and fledging dates from nest observations in birds
data and R code to reproduce the analysis and plots presented in the manuscript: "Macrophenological dynamics from citizen science plant occurrence data"
Bush ER & Whytock RC, Bahaa-el-din L, Bourgeois S, Bunnefeld N, Cardoso AW, Thoussaint Dikangadissi J, Dimbonda P, Dimoto E, Edzang Ndong J, Jeffery KJ, Lehmann D, Makaga L, Momboua B, Momont LRW, Tutin CEG, White LJT, Whittaker A, Abernethy K. 2020. Long-term collapse in fruit availability threatens Central African forest megafauna.
Code repo for the RQM class lampyrid project, SS16
A single function to calculate Augspurgers index of synchrony after Primack 1980
This repository is created to facilitate our fellow tree enthusiasts in retrieving data and doing analysis regarding the Tree Spotters project.
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