R interface for FDA Adverse Event Reporting System
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Apr 10, 2026 - R
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faers
Here are 33 public repositories matching this topic...
Co-occurrence analysis in pubmed and faers of two lists of terms.
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Mar 8, 2025 - Jupyter Notebook
OpenSource FAERS Database Cleansing, Merging and Analysis using postgresql
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Jan 23, 2021 - Python
Code and Datasets for the paper "Towards early detection of adverse drug reactions: combining pre-clinical drug structures and post-market safety reports", published on BMC Medical Informatics and Decision Making in 2019.
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Aug 16, 2020 - Python
Code and Datasets for the paper "A Computational Framework for Identifying Age Risks in Drug-Adverse Event Pairs", published on AMIA 2022 Informatics Summit.
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Jan 7, 2022 - R
Drug Side Effect Checker - The Pharmacovigilance Dashboard Prototype build with FDA (FAERS) data
fda data-visualisation adverse-events side-effects drug-safety pharmacovigilance design-principles adverse-drug-reaction faers dashboards-tableau design-science-research fda-api
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Aug 9, 2023 - Jupyter Notebook
Intelligent Pharmacovigilance Signal Triage Orchestrator fusing openFDA/FAERS disproportionality, ChEMBL mechanisms, and PubMed literature. Features deterministic multi-source confidence gating, strict/lenient dual-metric evaluation, and an interactive zero-API Streamlit dashboard.
python pubmed drug-safety chembl clinical-decision-support openfda pharmacovigilance evidence-based-medicine streamlit faers agentic-ai adverse-drug-reactions
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Aug 21, 2026 - Python
教學用 FAERS ADR 嫌疑藥排序工具：反向查詢 + ROR/PRR 不相稱性 + 時序加權 + Naranjo/WHO-UMC 因果評分。非臨床決策工具。
education adr signal-detection openfda pharmacovigilance polypharmacy faers adverse-drug-reactions naranjo
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Jun 17, 2026 - HTML
MCP server for FDA data: drug approvals, recalls, adverse events, 510(k) device clearances. Wraps openFDA.
mcp fda recall cursor claude openfda faers 510k drug-approval model-context-protocol mcp-server clinical-llm
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Jun 11, 2026 - TypeScript
Open-source pharmacovigilance engine for FDA adverse event signal detection. Provides validated statistical primitives (PRR, ROR, IC), MedDRA mapping, and reproducibility tools for drug safety research.
data-visualization adverse-events drug-safety openfda pharmacovigilance medical-data faers healthcare-analytics
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Jun 1, 2026 - TypeScript
Automated pharmacovigilance literature validation for ultra‑rare neurological diseases. Enter a drug name and an adverse event. The app searches PubMed with a multi‑tier cascade, extracts the most relevant evidence, and returns a verdict — Present or Absent — backed by a fine‑tuned PubMedBERT model.
open-source benchmark gradio signal-detection natural-language-inference zero-shot zero-shot-learning drug-safety few-shot pharmacovigilance few-shot-learning rare-disease huggingface faers ntd biomedical-nlp pubmedbert literature-validation
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Jun 21, 2026 - Python
Step1-Step6 preprocessing workflow and final FAERS compound-PT-SOC core graph releases with standardized compounds, MedDRA PT/SOC mapping, and three pruned graph versions.
knowledge-graph drugbank compound pt data-preprocessing soc smiles rxnorm pharmacovigilance inchikey biomedical-data faers meddra adverse-drug-reactions heterograph
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Apr 23, 2026 - Python
Exploratory pharmacovigilance analysis of FDA FAERS data using SQL, DuckDB, pandas, NumPy, and Matplotlib.
python sql exploratory-data-analysis fda pandas drug-safety pharmacovigilance duckdb faers healthcare-analytics
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Aug 14, 2026 - Jupyter Notebook
Post-market drug safety signal detection for semaglutide using FDA FAERS data and disproportionality analysis (PRR, ROR, chi-square), cross-validated in Python and SAS
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Jul 17, 2026 - Jupyter Notebook
End-to-end pharmacovigilance signal detection on 756K FDA adverse event reports. PostgreSQL pipeline comparing three disproportionality metrics, validated against the OMOP reference set (IC025 AUC 0.812). Tableau Public dashboard.
sql postgresql data-analysis tableau signal-detection pharmacovigilance faers disproportionality-analysis
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Aug 17, 2026 - Python
Honest evaluation of emergent 3-drug interaction prediction from FAERS using GNNs
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Apr 18, 2026 - Python
Public reproducibility package for OAB–AF analyses using FAERS/JADER (figures, scripts, derived inputs).
atrial-fibrillation pharmacovigilance faers jader time-to-onset mirabegron solifenacin disproportionality-analysis
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Sep 7, 2025 - Python
Source-only toolkit for evaluating whether automated adverse-event coders preserve downstream pharmacovigilance signal decisions.
python adverse-events ohdsi pharmacovigilance faers ollama llm-evaluation disproportionality-analysis
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Jul 19, 2026 - Python
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