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wdl
Here are 145 public repositories matching this topic...
Visual Studio Code extension for Sprocket.
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Dec 20, 2025 - TypeScript
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
docker application workflow cloud bioinformatics scala executor hpc containers wdl ga4gh workflow-description-language workflow-execution
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Dec 19, 2025 - Scala
A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).
python kubernetes aws workflow pipeline slurm mesos wdl common-workflow-language gridengine cwl workflow-description-language
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Dec 19, 2025 - Python
A bioinformatics workflow engine built on top of the Workflow Description Language (WDL).
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Dec 20, 2025 - Rust
Nextflow, WDL and other bioinformatics pipelines for testing our pipeline monitoring platform
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Dec 18, 2025 - Shell
An app store for scientific workflows, tools, notebooks, and services
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Dec 18, 2025 - Java
Collection of bioinformatics-related WDL workflow for use in WILDS
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Dec 19, 2025 - WDL
Long read production pipelines
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Dec 13, 2025 - Jupyter Notebook
📦 Package manager for REAPER
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Dec 4, 2025 - C++
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
workflow bioinformatics genomics workflow-engine computational-biology next-generation-sequencing wdl cwl workflows cromwell wdl-workflow cwl-workflow bioinformatics-workflows stjudecloud
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Dec 19, 2025 - WDL
Create WDL documentation using Markdown.
workflow bioinformatics genomics computational-biology next-generation-sequencing wdl cromwell wdl-workflow stjudecloud
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Nov 25, 2025 - Python
Specification for the Workflow Description Language (WDL).
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Nov 10, 2025
Workflow Description Language developer tools & local runner
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Nov 9, 2025 - Python
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