Mitigating Domain Drift in Multi Species Segmentation with DINOv2: A Cross-Domain Evaluation in Herbicide Research Trials
Authors:
Artzai Picon,
Itziar Eguskiza,
Daniel Mugica,
Javier Romero,
Carlos Javier Jimenez,
Eric White,
Gabriel Do-Lago-Junqueira,
Christian Klukas,
Ramon Navarra-Mestre
Abstract:
Reliable plant species and damage segmentation for herbicide field research trials requires models that can withstand substantial real-world variation across seasons, geographies, devices, and sensing modalities. Most deep learning approaches trained on controlled datasets fail to generalize under these domain shifts, limiting their suitability for operational phenotyping pipelines. This study eva…
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Reliable plant species and damage segmentation for herbicide field research trials requires models that can withstand substantial real-world variation across seasons, geographies, devices, and sensing modalities. Most deep learning approaches trained on controlled datasets fail to generalize under these domain shifts, limiting their suitability for operational phenotyping pipelines. This study evaluates a segmentation framework that integrates vision foundation models (DINOv2) with hierarchical taxonomic inference to improve robustness across heterogeneous agricultural conditions. We train on a large, multi-year dataset collected in Germany and Spain (2018-2020), comprising 14 plant species and 4 herbicide damage classes, and assess generalization under increasingly challenging shifts: temporal and device changes (2023), geographic transfer to the United States, and extreme sensor shift to drone imagery (2024). Results show that the foundation-model backbone consistently outperforms prior baselines, improving species-level F1 from 0.52 to 0.87 on in-distribution data and maintaining significant advantages under moderate (0.77 vs. 0.24) and extreme (0.44 vs. 0.14) shift conditions. Hierarchical inference provides an additional layer of robustness, enabling meaningful predictions even when fine-grained species classification degrades (family F1: 0.68, class F1: 0.88 on aerial imagery). Error analysis reveals that failures under severe shift stem primarily from vegetation-soil confusion, suggesting that taxonomic distinctions remain preserved despite background and viewpoint variability. The system is now deployed within BASF's phenotyping workflow for herbicide research trials across multiple regions, illustrating the practical viability of combining foundation models with structured biological hierarchies for scalable, shift-resilient agricultural monitoring.
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Submitted 10 April, 2026; v1 submitted 10 August, 2025;
originally announced August 2025.
Unleashing the Potential of Synthetic Images: A Study on Histopathology Image Classification
Authors:
Leire Benito-Del-Valle,
Aitor Alvarez-Gila,
Itziar Eguskiza,
Cristina L. Saratxaga
Abstract:
Histopathology image classification is crucial for the accurate identification and diagnosis of various diseases but requires large and diverse datasets. Obtaining such datasets, however, is often costly and time-consuming due to the need for expert annotations and ethical constraints. To address this, we examine the suitability of different generative models and image selection approaches to crea…
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Histopathology image classification is crucial for the accurate identification and diagnosis of various diseases but requires large and diverse datasets. Obtaining such datasets, however, is often costly and time-consuming due to the need for expert annotations and ethical constraints. To address this, we examine the suitability of different generative models and image selection approaches to create realistic synthetic histopathology image patches conditioned on class labels. Our findings highlight the importance of selecting an appropriate generative model type and architecture to enhance performance. Our experiments over the PCam dataset show that diffusion models are effective for transfer learning, while GAN-generated samples are better suited for augmentation. Additionally, transformer-based generative models do not require image filtering, in contrast to those derived from Convolutional Neural Networks (CNNs), which benefit from realism score-based selection. Therefore, we show that synthetic images can effectively augment existing datasets, ultimately improving the performance of the downstream histopathology image classification task.
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Submitted 24 September, 2024;
originally announced September 2024.