Showing 1–13 of 13 results for author: Qazi, M A

Quran-MD: A Fine-Grained Multilingual Multimodal Dataset of the Quran

Authors: Muhammad Umar Salman, Mohammad Areeb Qazi, Mohammed Talha Alam

Abstract: We present Quran MD, a comprehensive multimodal dataset of the Quran that integrates textual, linguistic, and audio dimensions at the verse and word levels. For each verse (ayah), the dataset provides its original Arabic text, English translation, and phonetic transliteration. To capture the rich oral tradition of Quranic recitation, we include verse-level audio from 32 distinct reciters, reflecti… ▽ More We present Quran MD, a comprehensive multimodal dataset of the Quran that integrates textual, linguistic, and audio dimensions at the verse and word levels. For each verse (ayah), the dataset provides its original Arabic text, English translation, and phonetic transliteration. To capture the rich oral tradition of Quranic recitation, we include verse-level audio from 32 distinct reciters, reflecting diverse recitation styles and dialectical nuances. At the word level, each token is paired with its corresponding Arabic script, English translation, transliteration, and an aligned audio recording, allowing fine-grained analysis of pronunciation, phonology, and semantic context. This dataset supports various applications, including natural language processing, speech recognition, text-to-speech synthesis, linguistic analysis, and digital Islamic studies. Bridging text and audio modalities across multiple reciters, this dataset provides a unique resource to advance computational approaches to Quranic recitation and study. Beyond enabling tasks such as ASR, tajweed detection, and Quranic TTS, it lays the foundation for multimodal embeddings, semantic retrieval, style transfer, and personalized tutoring systems that can support both research and community applications. The dataset is available at https://huggingface.co/datasets/Buraaq/quran-audio-text-dataset △ Less

Submitted 25 January, 2026; originally announced January 2026.

Comments: 6 pages, 2 tables and 2 figures

Beyond Generative AI: World Models for Clinical Prediction, Counterfactuals, and Planning

Authors: Mohammad Areeb Qazi, Maryam Nadeem, Mohammad Yaqub

Abstract: Healthcare requires AI that is predictive, reliable, and data-efficient. However, recent generative models lack physical foundation and temporal reasoning required for clinical decision support. As scaling language models show diminishing returns for grounded clinical reasoning, world models are gaining traction because they learn multimodal, temporally coherent, and action-conditioned representat… ▽ More Healthcare requires AI that is predictive, reliable, and data-efficient. However, recent generative models lack physical foundation and temporal reasoning required for clinical decision support. As scaling language models show diminishing returns for grounded clinical reasoning, world models are gaining traction because they learn multimodal, temporally coherent, and action-conditioned representations that reflect the physical and causal structure of care. This paper reviews World Models for healthcare systems that learn predictive dynamics to enable multistep rollouts, counterfactual evaluation and planning. We survey recent work across three domains: (i) medical imaging and diagnostics (e.g., longitudinal tumor simulation, projection-transition modeling, and Joint Embedding Predictive Architecture i.e., JEPA-style predictive representation learning), (ii) disease progression modeling from electronic health records (generative event forecasting at scale), and (iii) robotic surgery and surgical planning (action-conditioned guidance and control). We also introduce a capability rubric: L1 temporal prediction, L2 action-conditioned prediction, L3 counterfactual rollouts for decision support, and L4 planning/control. Most reviewed systems achieve L1--L2, with fewer instances of L3 and rare L4. We identify cross-cutting gaps that limit clinical reliability; under-specified action spaces and safety constraints, weak interventional validation, incomplete multimodal state construction, and limited trajectory-level uncertainty calibration. This review outlines a research agenda for clinically robust prediction-first world models that integrate generative backbones (transformers, diffusion, VAE) with causal/mechanical foundation for safe decision support in healthcare. △ Less

Submitted 20 November, 2025; originally announced November 2025.

Comments: 2 Figures, 1 Table

MAFM^3: Modular Adaptation of Foundation Models for Multi-Modal Medical AI

Authors: Mohammad Areeb Qazi, Munachiso S Nwadike, Ibrahim Almakky, Mohammad Yaqub, Numan Saeed

Abstract: Foundational models are trained on extensive datasets to capture the general trends of a domain. However, in medical imaging, the scarcity of data makes pre-training for every domain, modality, or task challenging. Instead of building separate models, we propose MAFM^3 (Modular Adaptation of Foundation Models for Multi-Modal Medical AI), a framework that enables a single foundation model to expand… ▽ More Foundational models are trained on extensive datasets to capture the general trends of a domain. However, in medical imaging, the scarcity of data makes pre-training for every domain, modality, or task challenging. Instead of building separate models, we propose MAFM^3 (Modular Adaptation of Foundation Models for Multi-Modal Medical AI), a framework that enables a single foundation model to expand into diverse domains, tasks, and modalities through lightweight modular components. These components serve as specialized skill sets that allow the system to flexibly activate the appropriate capability at the inference time, depending on the input type or clinical objective. Unlike conventional adaptation methods that treat each new task or modality in isolation, MAFM^3 provides a unified and expandable framework for efficient multitask and multimodality adaptation. Empirically, we validate our approach by adapting a chest CT foundation model initially trained for classification into prognosis and segmentation modules. Our results show improved performance on both tasks. Furthermore, by incorporating PET scans, MAFM^3 achieved an improvement in the Dice score 5% compared to the respective baselines. These findings establish that foundation models, when equipped with modular components, are not inherently constrained to their initial training scope but can evolve into multitask, multimodality systems for medical imaging. The code implementation of this work can be found at https://github.com/Areeb2735/CTscan_prognosis_VLM △ Less

Submitted 14 November, 2025; originally announced November 2025.

Comments: 2 figures, 3 tables

UNICON: UNIfied CONtinual Learning for Medical Foundational Models

Authors: Mohammad Areeb Qazi, Munachiso S Nwadike, Ibrahim Almakky, Mohammad Yaqub, Numan Saeed

Abstract: Foundational models are trained on extensive datasets to capture the general trends of a domain. However, in medical imaging, the scarcity of data makes pre-training for every domain, modality, or task challenging. Continual learning offers a solution by fine-tuning a model sequentially on different domains or tasks, enabling it to integrate new knowledge without requiring large datasets for each… ▽ More Foundational models are trained on extensive datasets to capture the general trends of a domain. However, in medical imaging, the scarcity of data makes pre-training for every domain, modality, or task challenging. Continual learning offers a solution by fine-tuning a model sequentially on different domains or tasks, enabling it to integrate new knowledge without requiring large datasets for each training phase. In this paper, we propose UNIfied CONtinual Learning for Medical Foundational Models (UNICON), a framework that enables the seamless adaptation of foundation models to diverse domains, tasks, and modalities. Unlike conventional adaptation methods that treat these changes in isolation, UNICON provides a unified, perpetually expandable framework. Through careful integration, we show that foundation models can dynamically expand across imaging modalities, anatomical regions, and clinical objectives without catastrophic forgetting or task interference. Empirically, we validate our approach by adapting a chest CT foundation model initially trained for classification to a prognosis and segmentation task. Our results show improved performance across both additional tasks. Furthermore, we continually incorporated PET scans and achieved a 5\% improvement in Dice score compared to respective baselines. These findings establish that foundation models are not inherently constrained to their initial training scope but can evolve, paving the way toward generalist AI models for medical imaging. △ Less

Submitted 19 August, 2025; originally announced August 2025.

Comments: 10 pages, 1 figure

PRISM: Distributed Inference for Foundation Models at Edge

Authors: Muhammad Azlan Qazi, Alexandros Iosifidis, Qi Zhang

Abstract: Foundation models (FMs) have achieved remarkable success across a wide range of applications, from image classification to natural langurage processing, but pose significant challenges for deployment at edge. This has sparked growing interest in developing practical and efficient strategies for bringing foundation models to edge environments. In this work, we propose PRISM, a communication-efficie… ▽ More Foundation models (FMs) have achieved remarkable success across a wide range of applications, from image classification to natural langurage processing, but pose significant challenges for deployment at edge. This has sparked growing interest in developing practical and efficient strategies for bringing foundation models to edge environments. In this work, we propose PRISM, a communication-efficient and compute-aware strategy for distributed Transformer inference on edge devices. Our method leverages a Segment Means representation to approximate intermediate output features, drastically reducing inter-device communication. Additionally, we restructure the self-attention mechanism to eliminate redundant computations caused by per-device Key/Value calculation in position-wise partitioning and design a partition-aware causal masking scheme tailored for autoregressive models. We evaluate PRISM on ViT, BERT, and GPT-2 across diverse datasets, namely CIFAR-10, CIFAR-100, ImageNet-1k, GLUE, and CBT. Our results demonstrate substantial reductions in communication overhead (up to 99.2% for BERT at compression rate CR = 128) and per-device computation (51.24% for BERT at the same setting), with only minor accuracy degradation. This method offers a scalable and practical solution for deploying foundation models in distributed resource-constrained environments. △ Less

Submitted 16 July, 2025; originally announced July 2025.

PALM: Few-Shot Prompt Learning for Audio Language Models

Authors: Asif Hanif, Maha Tufail Agro, Mohammad Areeb Qazi, Hanan Aldarmaki

Abstract: Audio-Language Models (ALMs) have recently achieved remarkable success in zero-shot audio recognition tasks, which match features of audio waveforms with class-specific text prompt features, inspired by advancements in Vision-Language Models (VLMs). Given the sensitivity of zero-shot performance to the choice of hand-crafted text prompts, many prompt learning techniques have been developed for VLM… ▽ More Audio-Language Models (ALMs) have recently achieved remarkable success in zero-shot audio recognition tasks, which match features of audio waveforms with class-specific text prompt features, inspired by advancements in Vision-Language Models (VLMs). Given the sensitivity of zero-shot performance to the choice of hand-crafted text prompts, many prompt learning techniques have been developed for VLMs. We explore the efficacy of these approaches in ALMs and propose a novel method, Prompt Learning in Audio Language Models (PALM), which optimizes the feature space of the text encoder branch. Unlike existing methods that work in the input space, our approach results in greater training efficiency. We demonstrate the effectiveness of our approach on 11 audio recognition datasets, encompassing a variety of speech-processing tasks, and compare the results with three baselines in a few-shot learning setup. Our method is either on par with or outperforms other approaches while being computationally less demanding. Code is available at https://asif-hanif.github.io/palm/ △ Less

Submitted 29 September, 2024; originally announced September 2024.

Comments: EMNLP 2024 (Main)

Introducing SDICE: An Index for Assessing Diversity of Synthetic Medical Datasets

Authors: Mohammed Talha Alam, Raza Imam, Mohammad Areeb Qazi, Asim Ukaye, Karthik Nandakumar

Abstract: Advancements in generative modeling are pushing the state-of-the-art in synthetic medical image generation. These synthetic images can serve as an effective data augmentation method to aid the development of more accurate machine learning models for medical image analysis. While the fidelity of these synthetic images has progressively increased, the diversity of these images is an understudied phe… ▽ More Advancements in generative modeling are pushing the state-of-the-art in synthetic medical image generation. These synthetic images can serve as an effective data augmentation method to aid the development of more accurate machine learning models for medical image analysis. While the fidelity of these synthetic images has progressively increased, the diversity of these images is an understudied phenomenon. In this work, we propose the SDICE index, which is based on the characterization of similarity distributions induced by a contrastive encoder. Given a synthetic dataset and a reference dataset of real images, the SDICE index measures the distance between the similarity score distributions of original and synthetic images, where the similarity scores are estimated using a pre-trained contrastive encoder. This distance is then normalized using an exponential function to provide a consistent metric that can be easily compared across domains. Experiments conducted on the MIMIC-chest X-ray and ImageNet datasets demonstrate the effectiveness of SDICE index in assessing synthetic medical dataset diversity. △ Less

Submitted 28 September, 2024; originally announced September 2024.

Comments: Accepted at BMVC 2024 - PFATCV

Continual Learning in Medical Imaging: A Survey and Practical Analysis

Authors: Mohammad Areeb Qazi, Anees Ur Rehman Hashmi, Santosh Sanjeev, Ibrahim Almakky, Numan Saeed, Camila Gonzalez, Mohammad Yaqub

Abstract: Deep Learning has shown great success in reshaping medical imaging, yet it faces numerous challenges hindering widespread application. Issues like catastrophic forgetting and distribution shifts in the continuously evolving data stream increase the gap between research and applications. Continual Learning offers promise in addressing these hurdles by enabling the sequential acquisition of new know… ▽ More Deep Learning has shown great success in reshaping medical imaging, yet it faces numerous challenges hindering widespread application. Issues like catastrophic forgetting and distribution shifts in the continuously evolving data stream increase the gap between research and applications. Continual Learning offers promise in addressing these hurdles by enabling the sequential acquisition of new knowledge without forgetting previous learnings in neural networks. In this survey, we comprehensively review the recent literature on continual learning in the medical domain, highlight recent trends, and point out the practical issues. Specifically, we survey the continual learning studies on classification, segmentation, detection, and other tasks in the medical domain. Furthermore, we develop a taxonomy for the reviewed studies, identify the challenges, and provide insights to overcome them. We also critically discuss the current state of continual learning in medical imaging, including identifying open problems and outlining promising future directions. We hope this survey will provide researchers with a useful overview of the developments in the field and will further increase interest in the community. To keep up with the fast-paced advancements in this field, we plan to routinely update the repository with the latest relevant papers at https://github.com/BioMedIA-MBZUAI/awesome-cl-in-medical . △ Less

Submitted 1 October, 2024; v1 submitted 22 May, 2024; originally announced May 2024.

Comments: 16 pages, 9 figures

DynaMMo: Dynamic Model Merging for Efficient Class Incremental Learning for Medical Images

Authors: Mohammad Areeb Qazi, Ibrahim Almakky, Anees Ur Rehman Hashmi, Santosh Sanjeev, Mohammad Yaqub

Abstract: Continual learning, the ability to acquire knowledge from new data while retaining previously learned information, is a fundamental challenge in machine learning. Various approaches, including memory replay, knowledge distillation, model regularization, and dynamic network expansion, have been proposed to address this issue. Thus far, dynamic network expansion methods have achieved state-of-the-ar… ▽ More Continual learning, the ability to acquire knowledge from new data while retaining previously learned information, is a fundamental challenge in machine learning. Various approaches, including memory replay, knowledge distillation, model regularization, and dynamic network expansion, have been proposed to address this issue. Thus far, dynamic network expansion methods have achieved state-of-the-art performance at the cost of incurring significant computational overhead. This is due to the need for additional model buffers, which makes it less feasible in resource-constrained settings, particularly in the medical domain. To overcome this challenge, we propose Dynamic Model Merging, DynaMMo, a method that merges multiple networks at different stages of model training to achieve better computational efficiency. Specifically, we employ lightweight learnable modules for each task and combine them into a unified model to minimize computational overhead. DynaMMo achieves this without compromising performance, offering a cost-effective solution for continual learning in medical applications. We evaluate DynaMMo on three publicly available datasets, demonstrating its effectiveness compared to existing approaches. DynaMMo offers around 10-fold reduction in GFLOPS with a small drop of 2.76 in average accuracy when compared to state-of-the-art dynamic-based approaches. The code implementation of this work will be available upon the acceptance of this work at https://github.com/BioMedIA-MBZUAI/DynaMMo. △ Less

Submitted 22 April, 2024; originally announced April 2024.

FissionFusion: Fast Geometric Generation and Hierarchical Souping for Medical Image Analysis

Authors: Santosh Sanjeev, Nuren Zhaksylyk, Ibrahim Almakky, Anees Ur Rehman Hashmi, Mohammad Areeb Qazi, Mohammad Yaqub

Abstract: The scarcity of well-annotated medical datasets requires leveraging transfer learning from broader datasets like ImageNet or pre-trained models like CLIP. Model soups averages multiple fine-tuned models aiming to improve performance on In-Domain (ID) tasks and enhance robustness against Out-of-Distribution (OOD) datasets. However, applying these methods to the medical imaging domain faces challeng… ▽ More The scarcity of well-annotated medical datasets requires leveraging transfer learning from broader datasets like ImageNet or pre-trained models like CLIP. Model soups averages multiple fine-tuned models aiming to improve performance on In-Domain (ID) tasks and enhance robustness against Out-of-Distribution (OOD) datasets. However, applying these methods to the medical imaging domain faces challenges and results in suboptimal performance. This is primarily due to differences in error surface characteristics that stem from data complexities such as heterogeneity, domain shift, class imbalance, and distributional shifts between training and testing phases. To address this issue, we propose a hierarchical merging approach that involves local and global aggregation of models at various levels based on models' hyperparameter configurations. Furthermore, to alleviate the need for training a large number of models in the hyperparameter search, we introduce a computationally efficient method using a cyclical learning rate scheduler to produce multiple models for aggregation in the weight space. Our method demonstrates significant improvements over the model souping approach across multiple datasets (around 6% gain in HAM10000 and CheXpert datasets) while maintaining low computational costs for model generation and selection. Moreover, we achieve better results on OOD datasets than model soups. The code is available at https://github.com/BioMedIA-MBZUAI/FissionFusion. △ Less

Submitted 3 June, 2024; v1 submitted 20 March, 2024; originally announced March 2024.

MedMerge: Merging Models for Effective Transfer Learning to Medical Imaging Tasks

Authors: Ibrahim Almakky, Santosh Sanjeev, Anees Ur Rehman Hashmi, Mohammad Areeb Qazi, Hu Wang, Mohammad Yaqub

Abstract: Transfer learning has become a powerful tool to initialize deep learning models to achieve faster convergence and higher performance. This is especially useful in the medical imaging analysis domain, where data scarcity limits possible performance gains for deep learning models. Some advancements have been made in boosting the transfer learning performance gain by merging models starting from the… ▽ More Transfer learning has become a powerful tool to initialize deep learning models to achieve faster convergence and higher performance. This is especially useful in the medical imaging analysis domain, where data scarcity limits possible performance gains for deep learning models. Some advancements have been made in boosting the transfer learning performance gain by merging models starting from the same initialization. However, in the medical imaging analysis domain, there is an opportunity to merge models starting from different initializations, thus combining the features learned from different tasks. In this work, we propose MedMerge, a method whereby the weights of different models can be merged, and their features can be effectively utilized to boost performance on a new task. With MedMerge, we learn kernel-level weights that can later be used to merge the models into a single model, even when starting from different initializations. Testing on various medical imaging analysis tasks, we show that our merged model can achieve significant performance gains, with up to 7% improvement on the F1 score. The code implementation of this work is available at github.com/BioMedIA-MBZUAI/MedMerge. △ Less

Submitted 15 April, 2025; v1 submitted 18 March, 2024; originally announced March 2024.

XReal: Realistic Anatomy and Pathology-Aware X-ray Generation via Controllable Diffusion Model

Authors: Anees Ur Rehman Hashmi, Ibrahim Almakky, Mohammad Areeb Qazi, Santosh Sanjeev, Vijay Ram Papineni, Jagalpathy Jagdish, Mohammad Yaqub

Abstract: Large-scale generative models have demonstrated impressive capabilities in producing visually compelling images, with increasing applications in medical imaging. However, they continue to grapple with hallucination challenges and the generation of anatomically inaccurate outputs. These limitations are mainly due to the reliance on textual inputs and lack of spatial control over the generated image… ▽ More Large-scale generative models have demonstrated impressive capabilities in producing visually compelling images, with increasing applications in medical imaging. However, they continue to grapple with hallucination challenges and the generation of anatomically inaccurate outputs. These limitations are mainly due to the reliance on textual inputs and lack of spatial control over the generated images, hindering the potential usefulness of such models in real-life settings. In this work, we present XReal, a novel controllable diffusion model for generating realistic chest X-ray images through precise anatomy and pathology location control. Our lightweight method comprises an Anatomy Controller and a Pathology Controller to introduce spatial control over anatomy and pathology in a pre-trained Text-to-Image Diffusion Model, respectively, without fine-tuning the model. XReal outperforms state-of-the-art X-ray diffusion models in quantitative metrics and radiologists' ratings, showing significant gains in anatomy and pathology realism. Our model holds promise for advancing generative models in medical imaging, offering greater precision and adaptability while inviting further exploration in this evolving field. The code and pre-trained model weights are publicly available at https://github.com/BioMedIA-MBZUAI/XReal. △ Less

Submitted 22 October, 2024; v1 submitted 14 March, 2024; originally announced March 2024.

Multi-Task Learning Approach for Unified Biometric Estimation from Fetal Ultrasound Anomaly Scans

Authors: Mohammad Areeb Qazi, Mohammed Talha Alam, Ibrahim Almakky, Werner Gerhard Diehl, Leanne Bricker, Mohammad Yaqub

Abstract: Precise estimation of fetal biometry parameters from ultrasound images is vital for evaluating fetal growth, monitoring health, and identifying potential complications reliably. However, the automated computerized segmentation of the fetal head, abdomen, and femur from ultrasound images, along with the subsequent measurement of fetal biometrics, remains challenging. In this work, we propose a mult… ▽ More Precise estimation of fetal biometry parameters from ultrasound images is vital for evaluating fetal growth, monitoring health, and identifying potential complications reliably. However, the automated computerized segmentation of the fetal head, abdomen, and femur from ultrasound images, along with the subsequent measurement of fetal biometrics, remains challenging. In this work, we propose a multi-task learning approach to classify the region into head, abdomen and femur as well as estimate the associated parameters. We were able to achieve a mean absolute error (MAE) of 1.08 mm on head circumference, 1.44 mm on abdomen circumference and 1.10 mm on femur length with a classification accuracy of 99.91\% on a dataset of fetal Ultrasound images. To achieve this, we leverage a weighted joint classification and segmentation loss function to train a U-Net architecture with an added classification head. The code can be accessed through \href{https://github.com/BioMedIA-MBZUAI/Multi-Task-Learning-Approach-for-Unified-Biometric-Estimation-from-Fetal-Ultrasound-Anomaly-Scans.git}{\texttt{Github} △ Less

Submitted 16 November, 2023; originally announced November 2023.

Comments: 10 Pages, 4 Figures, The 4th International Conference on Medical Imaging and Computer-Aided Diagnosis