/*
 * Copyright Elasticsearch B.V. and/or licensed to Elasticsearch B.V. under one
 * or more contributor license agreements. Licensed under the Elastic License
 * 2.0 and the Server Side Public License, v 1; you may not use this file except
 * in compliance with, at your election, the Elastic License 2.0 or the Server
 * Side Public License, v 1.
 */

package org.elasticsearch.index.engine;

import com.carrotsearch.hppc.cursors.ObjectCursor;
import com.carrotsearch.hppc.cursors.ObjectObjectCursor;
import com.carrotsearch.randomizedtesting.generators.RandomNumbers;
import org.apache.logging.log4j.Level;
import org.apache.logging.log4j.LogManager;
import org.apache.logging.log4j.Logger;
import org.apache.logging.log4j.core.LogEvent;
import org.apache.logging.log4j.core.appender.AbstractAppender;
import org.apache.logging.log4j.core.filter.RegexFilter;
import org.apache.lucene.document.Field;
import org.apache.lucene.document.LongPoint;
import org.apache.lucene.document.NumericDocValuesField;
import org.apache.lucene.document.StoredField;
import org.apache.lucene.document.TextField;
import org.apache.lucene.index.DirectoryReader;
import org.apache.lucene.index.IndexCommit;
import org.apache.lucene.index.IndexReader;
import org.apache.lucene.index.IndexWriter;
import org.apache.lucene.index.IndexWriterConfig;
import org.apache.lucene.index.IndexWriterMaxDocsChanger;
import org.apache.lucene.index.IndexableField;
import org.apache.lucene.index.LeafReader;
import org.apache.lucene.index.LeafReaderContext;
import org.apache.lucene.index.LiveIndexWriterConfig;
import org.apache.lucene.index.LogByteSizeMergePolicy;
import org.apache.lucene.index.LogDocMergePolicy;
import org.apache.lucene.index.MergePolicy;
import org.apache.lucene.index.NoMergePolicy;
import org.apache.lucene.index.NumericDocValues;
import org.apache.lucene.index.PointValues;
import org.apache.lucene.index.SegmentInfos;
import org.apache.lucene.index.SoftDeletesRetentionMergePolicy;
import org.apache.lucene.index.Term;
import org.apache.lucene.index.Terms;
import org.apache.lucene.index.TermsEnum;
import org.apache.lucene.index.TieredMergePolicy;
import org.apache.lucene.search.IndexSearcher;
import org.apache.lucene.search.MatchAllDocsQuery;
import org.apache.lucene.search.MatchNoDocsQuery;
import org.apache.lucene.search.ReferenceManager;
import org.apache.lucene.search.Sort;
import org.apache.lucene.search.SortedSetSortField;
import org.apache.lucene.search.TermQuery;
import org.apache.lucene.search.TopDocs;
import org.apache.lucene.search.TotalHitCountCollector;
import org.apache.lucene.store.AlreadyClosedException;
import org.apache.lucene.store.Directory;
import org.apache.lucene.store.Lock;
import org.apache.lucene.store.MockDirectoryWrapper;
import org.apache.lucene.util.Bits;
import org.apache.lucene.util.BytesRef;
import org.apache.lucene.util.FixedBitSet;
import org.elasticsearch.ElasticsearchException;
import org.elasticsearch.Version;
import org.elasticsearch.action.ActionListener;
import org.elasticsearch.action.index.IndexRequest;
import org.elasticsearch.action.support.TransportActions;
import org.elasticsearch.cluster.metadata.IndexMetadata;
import org.elasticsearch.cluster.routing.IndexShardRoutingTable;
import org.elasticsearch.cluster.routing.ShardRouting;
import org.elasticsearch.cluster.routing.ShardRoutingState;
import org.elasticsearch.cluster.routing.TestShardRouting;
import org.elasticsearch.common.CheckedBiConsumer;
import org.elasticsearch.common.CheckedRunnable;
import org.elasticsearch.common.Randomness;
import org.elasticsearch.common.Strings;
import org.elasticsearch.common.TriFunction;
import org.elasticsearch.common.UUIDs;
import org.elasticsearch.common.breaker.CircuitBreaker;
import org.elasticsearch.common.bytes.BytesArray;
import org.elasticsearch.common.bytes.BytesReference;
import org.elasticsearch.common.collect.Tuple;
import org.elasticsearch.common.logging.Loggers;
import org.elasticsearch.common.lucene.Lucene;
import org.elasticsearch.common.lucene.index.ElasticsearchDirectoryReader;
import org.elasticsearch.common.lucene.index.SequentialStoredFieldsLeafReader;
import org.elasticsearch.common.lucene.uid.Versions;
import org.elasticsearch.common.lucene.uid.VersionsAndSeqNoResolver;
import org.elasticsearch.common.lucene.uid.VersionsAndSeqNoResolver.DocIdAndSeqNo;
import org.elasticsearch.common.settings.Settings;
import org.elasticsearch.common.unit.ByteSizeValue;
import org.elasticsearch.common.unit.TimeValue;
import org.elasticsearch.common.util.BigArrays;
import org.elasticsearch.common.util.concurrent.AbstractRunnable;
import org.elasticsearch.common.util.concurrent.ConcurrentCollections;
import org.elasticsearch.common.xcontent.XContentType;
import org.elasticsearch.core.internal.io.IOUtils;
import org.elasticsearch.index.IndexModule;
import org.elasticsearch.index.IndexSettings;
import org.elasticsearch.index.VersionType;
import org.elasticsearch.index.codec.CodecService;
import org.elasticsearch.index.fieldvisitor.FieldsVisitor;
import org.elasticsearch.index.mapper.ContentPath;
import org.elasticsearch.index.mapper.DocumentMapper;
import org.elasticsearch.index.mapper.IdFieldMapper;
import org.elasticsearch.index.mapper.MapperService;
import org.elasticsearch.index.mapper.Mapping;
import org.elasticsearch.index.mapper.MetadataFieldMapper;
import org.elasticsearch.index.mapper.ParseContext;
import org.elasticsearch.index.mapper.ParseContext.Document;
import org.elasticsearch.index.mapper.ParsedDocument;
import org.elasticsearch.index.mapper.RootObjectMapper;
import org.elasticsearch.index.mapper.SeqNoFieldMapper;
import org.elasticsearch.index.mapper.SourceFieldMapper;
import org.elasticsearch.index.mapper.Uid;
import org.elasticsearch.index.mapper.VersionFieldMapper;
import org.elasticsearch.index.seqno.LocalCheckpointTracker;
import org.elasticsearch.index.seqno.ReplicationTracker;
import org.elasticsearch.index.seqno.RetentionLease;
import org.elasticsearch.index.seqno.RetentionLeases;
import org.elasticsearch.index.seqno.SeqNoStats;
import org.elasticsearch.index.seqno.SequenceNumbers;
import org.elasticsearch.index.shard.SearcherHelper;
import org.elasticsearch.index.shard.ShardId;
import org.elasticsearch.index.shard.ShardUtils;
import org.elasticsearch.index.store.Store;
import org.elasticsearch.index.translog.SnapshotMatchers;
import org.elasticsearch.index.translog.TestTranslog;
import org.elasticsearch.index.translog.Translog;
import org.elasticsearch.index.translog.TranslogConfig;
import org.elasticsearch.indices.breaker.NoneCircuitBreakerService;
import org.elasticsearch.test.IndexSettingsModule;
import org.elasticsearch.test.VersionUtils;
import org.elasticsearch.threadpool.ThreadPool;
import org.hamcrest.MatcherAssert;
import org.hamcrest.Matchers;

import java.io.Closeable;
import java.io.IOException;
import java.io.UncheckedIOException;
import java.nio.charset.Charset;
import java.nio.file.Files;
import java.nio.file.Path;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Base64;
import java.util.Collections;
import java.util.Comparator;
import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.LinkedHashMap;
import java.util.List;
import java.util.Map;
import java.util.Queue;
import java.util.Set;
import java.util.concurrent.BrokenBarrierException;
import java.util.concurrent.CountDownLatch;
import java.util.concurrent.CyclicBarrier;
import java.util.concurrent.Phaser;
import java.util.concurrent.Semaphore;
import java.util.concurrent.TimeUnit;
import java.util.concurrent.atomic.AtomicBoolean;
import java.util.concurrent.atomic.AtomicInteger;
import java.util.concurrent.atomic.AtomicLong;
import java.util.concurrent.atomic.AtomicReference;
import java.util.function.BiFunction;
import java.util.function.Function;
import java.util.function.IntSupplier;
import java.util.function.LongSupplier;
import java.util.function.Supplier;
import java.util.function.ToLongBiFunction;
import java.util.stream.Collectors;
import java.util.stream.LongStream;

import static java.util.Collections.emptyMap;
import static java.util.Collections.shuffle;
import static org.elasticsearch.index.engine.Engine.Operation.Origin.LOCAL_RESET;
import static org.elasticsearch.index.engine.Engine.Operation.Origin.LOCAL_TRANSLOG_RECOVERY;
import static org.elasticsearch.index.engine.Engine.Operation.Origin.PEER_RECOVERY;
import static org.elasticsearch.index.engine.Engine.Operation.Origin.PRIMARY;
import static org.elasticsearch.index.engine.Engine.Operation.Origin.REPLICA;
import static org.elasticsearch.index.seqno.SequenceNumbers.NO_OPS_PERFORMED;
import static org.elasticsearch.index.seqno.SequenceNumbers.UNASSIGNED_PRIMARY_TERM;
import static org.elasticsearch.index.seqno.SequenceNumbers.UNASSIGNED_SEQ_NO;
import static org.elasticsearch.index.translog.TranslogDeletionPolicies.createTranslogDeletionPolicy;
import static org.hamcrest.CoreMatchers.instanceOf;
import static org.hamcrest.CoreMatchers.sameInstance;
import static org.hamcrest.Matchers.contains;
import static org.hamcrest.Matchers.containsInAnyOrder;
import static org.hamcrest.Matchers.containsString;
import static org.hamcrest.Matchers.empty;
import static org.hamcrest.Matchers.emptyArray;
import static org.hamcrest.Matchers.equalTo;
import static org.hamcrest.Matchers.greaterThan;
import static org.hamcrest.Matchers.greaterThanOrEqualTo;
import static org.hamcrest.Matchers.hasItem;
import static org.hamcrest.Matchers.hasKey;
import static org.hamcrest.Matchers.hasSize;
import static org.hamcrest.Matchers.in;
import static org.hamcrest.Matchers.is;
import static org.hamcrest.Matchers.lessThanOrEqualTo;
import static org.hamcrest.Matchers.not;
import static org.hamcrest.Matchers.notNullValue;
import static org.hamcrest.Matchers.nullValue;
import static org.mockito.Mockito.atLeastOnce;
import static org.mockito.Mockito.doAnswer;
import static org.mockito.Mockito.spy;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;

public class InternalEngineTests extends EngineTestCase {

    public void testVersionMapAfterAutoIDDocument() throws IOException {
        engine.refresh("warm_up");
        ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField("test"),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        Engine.Index operation = randomBoolean() ?
            appendOnlyPrimary(doc, false, 1)
            : appendOnlyReplica(doc, false, 1, randomIntBetween(0, 5));
        engine.index(operation);
        assertFalse(engine.isSafeAccessRequired());
        doc = testParsedDocument("1", null, testDocumentWithTextField("updated"),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        Engine.Index update = indexForDoc(doc);
        engine.index(update);
        assertTrue(engine.isSafeAccessRequired());
        assertThat(engine.getVersionMap().values(), hasSize(1));
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            assertEquals(0, searcher.getIndexReader().numDocs());
        }

        try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
            assertEquals(1, searcher.getIndexReader().numDocs());
            TopDocs search = searcher.search(new MatchAllDocsQuery(), 1);
            org.apache.lucene.document.Document luceneDoc = searcher.doc(search.scoreDocs[0].doc);
            assertEquals("test", luceneDoc.get("value"));
        }

        // now lets make this document visible
        engine.refresh("test");
        if (randomBoolean()) { // random empty refresh
            engine.refresh("test");
        }
        assertTrue("safe access should be required we carried it over", engine.isSafeAccessRequired());
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            assertEquals(1, searcher.getIndexReader().numDocs());
            TopDocs search = searcher.search(new MatchAllDocsQuery(), 1);
            org.apache.lucene.document.Document luceneDoc = searcher.doc(search.scoreDocs[0].doc);
            assertEquals("updated", luceneDoc.get("value"));
        }

        doc = testParsedDocument("2", null, testDocumentWithTextField("test"),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        operation = randomBoolean() ?
            appendOnlyPrimary(doc, false, 1)
            : appendOnlyReplica(doc, false, 1, generateNewSeqNo(engine));
        engine.index(operation);
        assertTrue("safe access should be required", engine.isSafeAccessRequired());
        assertThat(engine.getVersionMap().values(), hasSize(1)); // now we add this to the map
        engine.refresh("test");
        if (randomBoolean()) { // randomly refresh here again
            engine.refresh("test");
        }
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            assertEquals(2, searcher.getIndexReader().numDocs());
        }
        if (operation.origin() == PRIMARY) {
            assertFalse("safe access should NOT be required last indexing round was only append only", engine.isSafeAccessRequired());
        }
        engine.delete(new Engine.Delete(operation.type(), operation.id(), operation.uid(), primaryTerm.get()));
        assertTrue("safe access should be required", engine.isSafeAccessRequired());
        engine.refresh("test");
        assertTrue("safe access should be required", engine.isSafeAccessRequired());
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            assertEquals(1, searcher.getIndexReader().numDocs());
        }
    }

    public void testSegmentsWithoutSoftDeletes() throws Exception {
        Settings settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), false).build();
        IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
            IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), NoMergePolicy.INSTANCE, null))) {
            List<Segment> segments = engine.segments(false);
            assertThat(segments.isEmpty(), equalTo(true));
            assertThat(engine.segmentsStats(false, false).getCount(), equalTo(0L));
            assertThat(engine.segmentsStats(false, false).getMemoryInBytes(), equalTo(0L));

            // create two docs and refresh
            ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            Engine.Index first = indexForDoc(doc);
            Engine.IndexResult firstResult = engine.index(first);
            ParsedDocument doc2 = testParsedDocument("2", null, testDocumentWithTextField(), B_2, null);
            Engine.Index second = indexForDoc(doc2);
            Engine.IndexResult secondResult = engine.index(second);
            assertThat(secondResult.getTranslogLocation(), greaterThan(firstResult.getTranslogLocation()));
            engine.refresh("test");

            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(1));
            SegmentsStats stats = engine.segmentsStats(false, false);
            assertThat(stats.getCount(), equalTo(1L));
            assertThat(stats.getTermsMemoryInBytes(), greaterThan(0L));
            assertThat(stats.getStoredFieldsMemoryInBytes(), greaterThan(0L));
            assertThat(stats.getTermVectorsMemoryInBytes(), equalTo(0L));
            assertThat(stats.getNormsMemoryInBytes(), greaterThan(0L));
            assertThat(stats.getDocValuesMemoryInBytes(), greaterThan(0L));
            assertThat(segments.get(0).isCommitted(), equalTo(false));
            assertThat(segments.get(0).isSearch(), equalTo(true));
            assertThat(segments.get(0).getNumDocs(), equalTo(2));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(0).isCompound(), equalTo(true));
            assertThat(segments.get(0).ramTree, nullValue());
            engine.flush();

            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(1));
            assertThat(engine.segmentsStats(false, false).getCount(), equalTo(1L));
            assertThat(segments.get(0).isCommitted(), equalTo(true));
            assertThat(segments.get(0).isSearch(), equalTo(true));
            assertThat(segments.get(0).getNumDocs(), equalTo(2));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(0).isCompound(), equalTo(true));

            ParsedDocument doc3 = testParsedDocument("3", null, testDocumentWithTextField(), B_3, null);
            engine.index(indexForDoc(doc3));
            engine.refresh("test");

            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(2));
            assertThat(engine.segmentsStats(false, false).getCount(), equalTo(2L));
            assertThat(engine.segmentsStats(false, false).getTermsMemoryInBytes(),
                greaterThan(stats.getTermsMemoryInBytes()));
            assertThat(engine.segmentsStats(false, false).getStoredFieldsMemoryInBytes(),
                greaterThan(stats.getStoredFieldsMemoryInBytes()));
            assertThat(engine.segmentsStats(false, false).getTermVectorsMemoryInBytes(), equalTo(0L));
            assertThat(engine.segmentsStats(false, false).getNormsMemoryInBytes(),
                greaterThan(stats.getNormsMemoryInBytes()));
            assertThat(engine.segmentsStats(false, false).getDocValuesMemoryInBytes(),
                greaterThan(stats.getDocValuesMemoryInBytes()));
            assertThat(segments.get(0).getGeneration() < segments.get(1).getGeneration(), equalTo(true));
            assertThat(segments.get(0).isCommitted(), equalTo(true));
            assertThat(segments.get(0).isSearch(), equalTo(true));
            assertThat(segments.get(0).getNumDocs(), equalTo(2));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(0).isCompound(), equalTo(true));


            assertThat(segments.get(1).isCommitted(), equalTo(false));
            assertThat(segments.get(1).isSearch(), equalTo(true));
            assertThat(segments.get(1).getNumDocs(), equalTo(1));
            assertThat(segments.get(1).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(1).isCompound(), equalTo(true));


            engine.delete(new Engine.Delete("test", "1", newUid(doc), primaryTerm.get()));
            engine.refresh("test");

            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(2));
            assertThat(engine.segmentsStats(false, false).getCount(), equalTo(2L));
            assertThat(segments.get(0).getGeneration() < segments.get(1).getGeneration(), equalTo(true));
            assertThat(segments.get(0).isCommitted(), equalTo(true));
            assertThat(segments.get(0).isSearch(), equalTo(true));
            assertThat(segments.get(0).getNumDocs(), equalTo(1));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(1));
            assertThat(segments.get(0).isCompound(), equalTo(true));

            assertThat(segments.get(1).isCommitted(), equalTo(false));
            assertThat(segments.get(1).isSearch(), equalTo(true));
            assertThat(segments.get(1).getNumDocs(), equalTo(1));
            assertThat(segments.get(1).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(1).isCompound(), equalTo(true));

            engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
                indexSettings.getSoftDeleteRetentionOperations());
            ParsedDocument doc4 = testParsedDocument("4", null, testDocumentWithTextField(), B_3, null);
            engine.index(indexForDoc(doc4));
            engine.refresh("test");

            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(3));
            assertThat(engine.segmentsStats(false, false).getCount(), equalTo(3L));
            assertThat(segments.get(0).getGeneration() < segments.get(1).getGeneration(), equalTo(true));
            assertThat(segments.get(0).isCommitted(), equalTo(true));
            assertThat(segments.get(0).isSearch(), equalTo(true));
            assertThat(segments.get(0).getNumDocs(), equalTo(1));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(1));
            assertThat(segments.get(0).isCompound(), equalTo(true));

            assertThat(segments.get(1).isCommitted(), equalTo(false));
            assertThat(segments.get(1).isSearch(), equalTo(true));
            assertThat(segments.get(1).getNumDocs(), equalTo(1));
            assertThat(segments.get(1).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(1).isCompound(), equalTo(true));

            assertThat(segments.get(2).isCommitted(), equalTo(false));
            assertThat(segments.get(2).isSearch(), equalTo(true));
            assertThat(segments.get(2).getNumDocs(), equalTo(1));
            assertThat(segments.get(2).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(2).isCompound(), equalTo(true));

            // internal refresh - lets make sure we see those segments in the stats
            ParsedDocument doc5 = testParsedDocument("5", null, testDocumentWithTextField(), B_3, null);
            engine.index(indexForDoc(doc5));
            engine.refresh("test", Engine.SearcherScope.INTERNAL, true);

            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(4));
            assertThat(engine.segmentsStats(false, false).getCount(), equalTo(4L));
            assertThat(segments.get(0).getGeneration() < segments.get(1).getGeneration(), equalTo(true));
            assertThat(segments.get(0).isCommitted(), equalTo(true));
            assertThat(segments.get(0).isSearch(), equalTo(true));
            assertThat(segments.get(0).getNumDocs(), equalTo(1));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(1));
            assertThat(segments.get(0).isCompound(), equalTo(true));

            assertThat(segments.get(1).isCommitted(), equalTo(false));
            assertThat(segments.get(1).isSearch(), equalTo(true));
            assertThat(segments.get(1).getNumDocs(), equalTo(1));
            assertThat(segments.get(1).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(1).isCompound(), equalTo(true));

            assertThat(segments.get(2).isCommitted(), equalTo(false));
            assertThat(segments.get(2).isSearch(), equalTo(true));
            assertThat(segments.get(2).getNumDocs(), equalTo(1));
            assertThat(segments.get(2).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(2).isCompound(), equalTo(true));

            assertThat(segments.get(3).isCommitted(), equalTo(false));
            assertThat(segments.get(3).isSearch(), equalTo(false));
            assertThat(segments.get(3).getNumDocs(), equalTo(1));
            assertThat(segments.get(3).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(3).isCompound(), equalTo(true));

            // now refresh the external searcher and make sure it has the new segment
            engine.refresh("test");
            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(4));
            assertThat(engine.segmentsStats(false, false).getCount(), equalTo(4L));
            assertThat(segments.get(0).getGeneration() < segments.get(1).getGeneration(), equalTo(true));
            assertThat(segments.get(0).isCommitted(), equalTo(true));
            assertThat(segments.get(0).isSearch(), equalTo(true));
            assertThat(segments.get(0).getNumDocs(), equalTo(1));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(1));
            assertThat(segments.get(0).isCompound(), equalTo(true));

            assertThat(segments.get(1).isCommitted(), equalTo(false));
            assertThat(segments.get(1).isSearch(), equalTo(true));
            assertThat(segments.get(1).getNumDocs(), equalTo(1));
            assertThat(segments.get(1).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(1).isCompound(), equalTo(true));

            assertThat(segments.get(2).isCommitted(), equalTo(false));
            assertThat(segments.get(2).isSearch(), equalTo(true));
            assertThat(segments.get(2).getNumDocs(), equalTo(1));
            assertThat(segments.get(2).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(2).isCompound(), equalTo(true));

            assertThat(segments.get(3).isCommitted(), equalTo(false));
            assertThat(segments.get(3).isSearch(), equalTo(true));
            assertThat(segments.get(3).getNumDocs(), equalTo(1));
            assertThat(segments.get(3).getDeletedDocs(), equalTo(0));
            assertThat(segments.get(3).isCompound(), equalTo(true));
        }
    }

    public void testVerboseSegments() throws Exception {
        try (Store store = createStore();
             Engine engine = createEngine(defaultSettings, store, createTempDir(), NoMergePolicy.INSTANCE)) {
            List<Segment> segments = engine.segments(true);
            assertThat(segments.isEmpty(), equalTo(true));

            ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            engine.index(indexForDoc(doc));
            engine.refresh("test");

            segments = engine.segments(true);
            assertThat(segments.size(), equalTo(1));
            assertThat(segments.get(0).ramTree, notNullValue());

            ParsedDocument doc2 = testParsedDocument("2", null, testDocumentWithTextField(), B_2, null);
            engine.index(indexForDoc(doc2));
            engine.refresh("test");
            ParsedDocument doc3 = testParsedDocument("3", null, testDocumentWithTextField(), B_3, null);
            engine.index(indexForDoc(doc3));
            engine.refresh("test");

            segments = engine.segments(true);
            assertThat(segments.size(), equalTo(3));
            assertThat(segments.get(0).ramTree, notNullValue());
            assertThat(segments.get(1).ramTree, notNullValue());
            assertThat(segments.get(2).ramTree, notNullValue());
        }
    }

    public void testSegmentsWithMergeFlag() throws Exception {
        try (Store store = createStore();
             Engine engine = createEngine(defaultSettings, store, createTempDir(), new TieredMergePolicy())) {
            ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
            Engine.Index index = indexForDoc(doc);
            engine.index(index);
            engine.flush();
            assertThat(engine.segments(false).size(), equalTo(1));
            index = indexForDoc(testParsedDocument("2", null, testDocument(), B_1, null));
            engine.index(index);
            engine.flush();
            List<Segment> segments = engine.segments(false);
            assertThat(segments.size(), equalTo(2));
            for (Segment segment : segments) {
                assertThat(segment.getMergeId(), nullValue());
            }
            index = indexForDoc(testParsedDocument("3", null, testDocument(), B_1, null));
            engine.index(index);
            engine.flush();
            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(3));
            for (Segment segment : segments) {
                assertThat(segment.getMergeId(), nullValue());
            }

            index = indexForDoc(doc);
            engine.index(index);
            engine.flush();
            final long gen1 = store.readLastCommittedSegmentsInfo().getGeneration();
            // now, optimize and wait for merges, see that we have no merge flag
            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());

            for (Segment segment : engine.segments(false)) {
                assertThat(segment.getMergeId(), nullValue());
            }
            // we could have multiple underlying merges, so the generation may increase more than once
            assertTrue(store.readLastCommittedSegmentsInfo().getGeneration() > gen1);

            final boolean flush = randomBoolean();
            final long gen2 = store.readLastCommittedSegmentsInfo().getGeneration();
            engine.forceMerge(flush, 1, false, false, false, UUIDs.randomBase64UUID());
            for (Segment segment : engine.segments(false)) {
                assertThat(segment.getMergeId(), nullValue());
            }

            if (flush) {
                // we should have had just 1 merge, so last generation should be exact
                assertEquals(gen2, store.readLastCommittedSegmentsInfo().getLastGeneration());
            }
        }
    }

    public void testSegmentsWithIndexSort() throws Exception {
        Sort indexSort = new Sort(new SortedSetSortField("_type", false));
        try (Store store = createStore();
             Engine engine =
                     createEngine(defaultSettings, store, createTempDir(),
                         NoMergePolicy.INSTANCE, null, null, null,
                         indexSort, null)) {
            List<Segment> segments = engine.segments(true);
            assertThat(segments.isEmpty(), equalTo(true));

            ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            engine.index(indexForDoc(doc));
            engine.refresh("test");

            segments = engine.segments(false);
            assertThat(segments.size(), equalTo(1));
            assertThat(segments.get(0).getSegmentSort(), equalTo(indexSort));

            ParsedDocument doc2 = testParsedDocument("2", null, testDocumentWithTextField(), B_2, null);
            engine.index(indexForDoc(doc2));
            engine.refresh("test");
            ParsedDocument doc3 = testParsedDocument("3", null, testDocumentWithTextField(), B_3, null);
            engine.index(indexForDoc(doc3));
            engine.refresh("test");

            segments = engine.segments(true);
            assertThat(segments.size(), equalTo(3));
            assertThat(segments.get(0).getSegmentSort(), equalTo(indexSort));
            assertThat(segments.get(1).getSegmentSort(), equalTo(indexSort));
            assertThat(segments.get(2).getSegmentSort(), equalTo(indexSort));
        }
    }

    public void testSegmentsStatsIncludingFileSizes() throws Exception {
        try (Store store = createStore();
             Engine engine = createEngine(defaultSettings, store, createTempDir(), NoMergePolicy.INSTANCE)) {
            assertThat(engine.segmentsStats(true, false).getFiles().size(), equalTo(0));

            ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            engine.index(indexForDoc(doc));
            engine.refresh("test");

            final SegmentsStats stats1 = engine.segmentsStats(true, false);
            assertThat(stats1.getFiles().size(), greaterThan(0));
            for (ObjectObjectCursor<String, SegmentsStats.FileStats> fileStats : stats1.getFiles()) {
                assertThat(fileStats.value.getTotal(), greaterThan(0L));
                assertThat(fileStats.value.getCount(), greaterThan(0L));
                assertThat(fileStats.value.getMin(), greaterThan(0L));
                assertThat(fileStats.value.getMax(), greaterThan(0L));
            }

            ParsedDocument doc2 = testParsedDocument("2", null, testDocumentWithTextField(), B_2, null);
            engine.index(indexForDoc(doc2));
            engine.refresh("test");

            final SegmentsStats stats2 = engine.segmentsStats(true, false);
            for (ObjectCursor<String> cursor : stats1.getFiles().keys()) {
                final String extension = cursor.value;
                assertThat(stats2.getFiles().get(extension).getTotal(), greaterThan((stats1.getFiles().get(extension).getTotal())));
                assertThat(stats2.getFiles().get(extension).getCount(), greaterThan((stats1.getFiles().get(extension).getCount())));
                assertThat(stats2.getFiles().get(extension).getMin(), greaterThan((0L)));
                assertThat(stats2.getFiles().get(extension).getMax(), greaterThan((0L)));
            }
        }
    }

    public void testSegmentsWithSoftDeletes() throws Exception {
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true);
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), NoMergePolicy.INSTANCE, null,
                 null, globalCheckpoint::get))) {
            assertThat(engine.segments(false), empty());
            int numDocsFirstSegment = randomIntBetween(5, 50);
            Set<String> liveDocsFirstSegment = new HashSet<>();
            for (int i = 0; i < numDocsFirstSegment; i++) {
                String id = Integer.toString(i);
                ParsedDocument doc = testParsedDocument(id, null, testDocument(), B_1, null);
                engine.index(indexForDoc(doc));
                liveDocsFirstSegment.add(id);
            }
            engine.refresh("test");
            List<Segment> segments = engine.segments(randomBoolean());
            assertThat(segments, hasSize(1));
            assertThat(segments.get(0).getNumDocs(), equalTo(liveDocsFirstSegment.size()));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(0));
            assertFalse(segments.get(0).committed);
            int deletes = 0;
            int updates = 0;
            int appends = 0;
            int iterations = scaledRandomIntBetween(1, 50);
            for (int i = 0; i < iterations && liveDocsFirstSegment.isEmpty() == false; i++) {
                String idToUpdate = randomFrom(liveDocsFirstSegment);
                liveDocsFirstSegment.remove(idToUpdate);
                ParsedDocument doc = testParsedDocument(idToUpdate, null, testDocument(), B_1, null);
                if (randomBoolean()) {
                    engine.delete(new Engine.Delete(doc.type(), doc.id(), newUid(doc), primaryTerm.get()));
                    deletes++;
                } else {
                    engine.index(indexForDoc(doc));
                    updates++;
                }
                if (randomBoolean()) {
                    engine.index(indexForDoc(testParsedDocument(UUIDs.randomBase64UUID(), null, testDocument(), B_1, null)));
                    appends++;
                }
            }
            boolean committed = randomBoolean();
            if (committed) {
                engine.flush();
            }
            engine.refresh("test");
            segments = engine.segments(randomBoolean());
            assertThat(segments, hasSize(2));
            assertThat(segments.get(0).getNumDocs(), equalTo(liveDocsFirstSegment.size()));
            assertThat(segments.get(0).getDeletedDocs(), equalTo(updates + deletes));
            assertThat(segments.get(0).committed, equalTo(committed));

            assertThat(segments.get(1).getNumDocs(), equalTo(updates + appends));
            assertThat(segments.get(1).getDeletedDocs(), equalTo(deletes)); // delete tombstones
            assertThat(segments.get(1).committed, equalTo(committed));
        }
    }

    public void testCommitStats() throws IOException {
        final AtomicLong maxSeqNo = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final AtomicLong localCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final AtomicLong globalCheckpoint = new AtomicLong(UNASSIGNED_SEQ_NO);
        try (
            Store store = createStore();
            InternalEngine engine = createEngine(store, createTempDir(), (maxSeq, localCP) -> new LocalCheckpointTracker(
                            maxSeq,
                            localCP) {
                        @Override
                        public long getMaxSeqNo() {
                            return maxSeqNo.get();
                        }

                        @Override
                        public long getProcessedCheckpoint() {
                            return localCheckpoint.get();
                        }
                    }
            )) {
            CommitStats stats1 = engine.commitStats();
            assertThat(stats1.getGeneration(), greaterThan(0L));
            assertThat(stats1.getId(), notNullValue());
            assertThat(stats1.getUserData(), hasKey(SequenceNumbers.LOCAL_CHECKPOINT_KEY));
            assertThat(
                Long.parseLong(stats1.getUserData().get(SequenceNumbers.LOCAL_CHECKPOINT_KEY)),
                equalTo(SequenceNumbers.NO_OPS_PERFORMED));

            assertThat(stats1.getUserData(), hasKey(SequenceNumbers.MAX_SEQ_NO));
            assertThat(
                Long.parseLong(stats1.getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                equalTo(SequenceNumbers.NO_OPS_PERFORMED));

            maxSeqNo.set(rarely() ? SequenceNumbers.NO_OPS_PERFORMED : randomIntBetween(0, 1024));
            localCheckpoint.set(
                rarely() || maxSeqNo.get() == SequenceNumbers.NO_OPS_PERFORMED ?
                    SequenceNumbers.NO_OPS_PERFORMED : randomIntBetween(0, 1024));
            globalCheckpoint.set(rarely() || localCheckpoint.get() == SequenceNumbers.NO_OPS_PERFORMED ?
                UNASSIGNED_SEQ_NO : randomIntBetween(0, (int) localCheckpoint.get()));

            final Engine.CommitId commitId = engine.flush(true, true);

            CommitStats stats2 = engine.commitStats();
            assertThat(stats2.getRawCommitId(), equalTo(commitId));
            assertThat(stats2.getGeneration(), greaterThan(stats1.getGeneration()));
            assertThat(stats2.getId(), notNullValue());
            assertThat(stats2.getId(), not(equalTo(stats1.getId())));
            assertThat(stats2.getUserData(), hasKey(Translog.TRANSLOG_UUID_KEY));
            assertThat(stats2.getUserData().get(Translog.TRANSLOG_UUID_KEY),
                equalTo(stats1.getUserData().get(Translog.TRANSLOG_UUID_KEY)));
            assertThat(Long.parseLong(stats2.getUserData().get(SequenceNumbers.LOCAL_CHECKPOINT_KEY)), equalTo(localCheckpoint.get()));
            assertThat(stats2.getUserData(), hasKey(SequenceNumbers.MAX_SEQ_NO));
            assertThat(Long.parseLong(stats2.getUserData().get(SequenceNumbers.MAX_SEQ_NO)), equalTo(maxSeqNo.get()));
        }
    }

    public void testFlushIsDisabledDuringTranslogRecovery() throws IOException {
        engine.ensureCanFlush(); // recovered already
        ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), SOURCE, null);
        engine.index(indexForDoc(doc));
        engine.close();

        engine = new InternalEngine(engine.config());
        expectThrows(IllegalStateException.class, engine::ensureCanFlush);
        expectThrows(IllegalStateException.class, () -> engine.flush(true, true));
        if (randomBoolean()) {
            engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
        } else {
            engine.skipTranslogRecovery();
        }
        engine.ensureCanFlush(); // ready
        doc = testParsedDocument("2", null, testDocumentWithTextField(), SOURCE, null);
        engine.index(indexForDoc(doc));
        engine.flush();
    }

    public void testTranslogMultipleOperationsSameDocument() throws IOException {
        final int ops = randomIntBetween(1, 32);
        Engine initialEngine;
        final List<Engine.Operation> operations = new ArrayList<>();
        try {
            initialEngine = engine;
            for (int i = 0; i < ops; i++) {
                final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), SOURCE, null);
                if (randomBoolean()) {
                        final Engine.Index operation = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO,
                        0, i, VersionType.EXTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(),
                            IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP, false, UNASSIGNED_SEQ_NO, 0);
                    operations.add(operation);
                    initialEngine.index(operation);
                } else {
                    final Engine.Delete operation = new Engine.Delete("test", "1", newUid(doc), UNASSIGNED_SEQ_NO, 0, i,
                        VersionType.EXTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(), UNASSIGNED_SEQ_NO, 0);
                    operations.add(operation);
                    initialEngine.delete(operation);
                }
            }
        } finally {
            IOUtils.close(engine);
        }
        try (Engine recoveringEngine = new InternalEngine(engine.config())) {
            recoveringEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            recoveringEngine.refresh("test");
            try (Engine.Searcher searcher = recoveringEngine.acquireSearcher("test")) {
                final TotalHitCountCollector collector = new TotalHitCountCollector();
                searcher.search(new MatchAllDocsQuery(), collector);
                assertThat(collector.getTotalHits(), equalTo(operations.get(operations.size() - 1) instanceof Engine.Delete ? 0 : 1));
            }
        }
    }

    public void testTranslogRecoveryDoesNotReplayIntoTranslog() throws IOException {
        final int docs = randomIntBetween(1, 32);
        Engine initialEngine = null;
        try {
            initialEngine = engine;
            for (int i = 0; i < docs; i++) {
                final String id = Integer.toString(i);
                final ParsedDocument doc = testParsedDocument(id, null, testDocumentWithTextField(), SOURCE, null);
                initialEngine.index(indexForDoc(doc));
            }
        } finally {
            IOUtils.close(initialEngine);
        }

        Engine recoveringEngine = null;
        try {
            final AtomicBoolean committed = new AtomicBoolean();
            recoveringEngine = new InternalEngine(initialEngine.config()) {

                @Override
                protected void commitIndexWriter(IndexWriter writer, Translog translog, String syncId) throws IOException {
                    committed.set(true);
                    super.commitIndexWriter(writer, translog, syncId);
                }
            };
            assertThat(getTranslog(recoveringEngine).stats().getUncommittedOperations(), equalTo(docs));
            recoveringEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            assertTrue(committed.get());
        } finally {
            IOUtils.close(recoveringEngine);
        }
    }

    public void testTranslogRecoveryWithMultipleGenerations() throws IOException {
        final int docs = randomIntBetween(1, 4096);
        final List<Long> seqNos = LongStream.range(0, docs).boxed().collect(Collectors.toList());
        Randomness.shuffle(seqNos);
        Engine initialEngine = null;
        Engine recoveringEngine = null;
        Store store = createStore();
        final AtomicInteger counter = new AtomicInteger();
        try {
            initialEngine = createEngine(
                    store,
                    createTempDir(),
                    LocalCheckpointTracker::new,
                    (engine, operation) -> seqNos.get(counter.getAndIncrement()));
            for (int i = 0; i < docs; i++) {
                final String id = Integer.toString(i);
                final ParsedDocument doc = testParsedDocument(id, null, testDocumentWithTextField(), SOURCE, null);
                initialEngine.index(indexForDoc(doc));
                if (rarely()) {
                    getTranslog(initialEngine).rollGeneration();
                } else if (rarely()) {
                    initialEngine.flush();
                }
            }
            initialEngine.close();
            recoveringEngine = new InternalEngine(initialEngine.config());
            recoveringEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            recoveringEngine.refresh("test");
            try (Engine.Searcher searcher = recoveringEngine.acquireSearcher("test")) {
                TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), docs);
                assertEquals(docs, topDocs.totalHits.value);
            }
        } finally {
            IOUtils.close(initialEngine, recoveringEngine, store);
        }
    }

    public void testRecoveryFromTranslogUpToSeqNo() throws IOException {
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        try (Store store = createStore()) {
            EngineConfig config = config(defaultSettings, store, createTempDir(), newMergePolicy(),
                null, null, globalCheckpoint::get);
            final long maxSeqNo;
            try (InternalEngine engine = createEngine(config)) {
                final int docs = randomIntBetween(1, 100);
                for (int i = 0; i < docs; i++) {
                    final String id = Integer.toString(i);
                    final ParsedDocument doc = testParsedDocument(id, null, testDocumentWithTextField(),
                        SOURCE, null);
                    engine.index(indexForDoc(doc));
                    if (rarely()) {
                        engine.rollTranslogGeneration();
                    } else if (rarely()) {
                        engine.flush(randomBoolean(), true);
                    }
                }
                maxSeqNo = engine.getLocalCheckpointTracker().getMaxSeqNo();
                globalCheckpoint.set(randomLongBetween(globalCheckpoint.get(), engine.getProcessedLocalCheckpoint()));
                engine.syncTranslog();
            }
            try (InternalEngine engine = new InternalEngine(config)) {
                engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                assertThat(engine.getProcessedLocalCheckpoint(), equalTo(maxSeqNo));
                assertThat(engine.getLocalCheckpointTracker().getMaxSeqNo(), equalTo(maxSeqNo));
            }
            try (InternalEngine engine = new InternalEngine(config)) {
                long upToSeqNo = randomLongBetween(globalCheckpoint.get(), maxSeqNo);
                engine.recoverFromTranslog(translogHandler, upToSeqNo);
                assertThat(engine.getProcessedLocalCheckpoint(), equalTo(upToSeqNo));
                assertThat(engine.getLocalCheckpointTracker().getMaxSeqNo(), equalTo(upToSeqNo));
            }
        }
    }

    public void testConcurrentGetAndFlush() throws Exception {
        ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
        engine.index(indexForDoc(doc));

        final AtomicReference<Engine.GetResult> latestGetResult = new AtomicReference<>();
        latestGetResult.set(engine.get(newGet(true, doc), docMapper(doc.type()), randomSearcherWrapper()));
        final AtomicBoolean flushFinished = new AtomicBoolean(false);
        final CyclicBarrier barrier = new CyclicBarrier(2);
        Thread getThread = new Thread(() -> {
            try {
                barrier.await();
            } catch (InterruptedException | BrokenBarrierException e) {
                throw new RuntimeException(e);
            }
            while (flushFinished.get() == false) {
                Engine.GetResult previousGetResult = latestGetResult.get();
                if (previousGetResult != null) {
                    previousGetResult.close();
                }
                latestGetResult.set(engine.get(newGet(true, doc), docMapper(doc.type()), randomSearcherWrapper()));
                if (latestGetResult.get().exists() == false) {
                    break;
                }
            }
        });
        getThread.start();
        barrier.await();
        engine.flush();
        flushFinished.set(true);
        getThread.join();
        assertTrue(latestGetResult.get().exists());
        latestGetResult.get().close();
    }

    public void testSimpleOperations() throws Exception {
        final DocumentMapper mapper = docMapper("test");
        engine.refresh("warm_up");
        Engine.Searcher searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(0));
        searchResult.close();

        // create a document
        Document document = testDocumentWithTextField();
        document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(B_1), SourceFieldMapper.Defaults.FIELD_TYPE));
        ParsedDocument doc = testParsedDocument("1", null, document, B_1, null);
        engine.index(indexForDoc(doc));

        // its not there...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 0));
        searchResult.close();

        // but, not there non realtime
        try (Engine.GetResult getResult = engine.get(newGet(false, doc), mapper, randomSearcherWrapper())) {
            assertThat(getResult.exists(), equalTo(false));
        }

        // but, we can still get it (in realtime)
        try (Engine.GetResult getResult = engine.get(newGet(true, doc), mapper, randomSearcherWrapper())) {
            assertThat(getResult.exists(), equalTo(true));
            assertThat(getResult.docIdAndVersion(), notNullValue());
        }

        // but not real time is not yet visible
        try (Engine.GetResult getResult = engine.get(newGet(false, doc), mapper, randomSearcherWrapper())) {
            assertThat(getResult.exists(), equalTo(false));
        }

        // refresh and it should be there
        engine.refresh("test");

        // now its there...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 1));
        searchResult.close();

        // also in non realtime
        try (Engine.GetResult getResult = engine.get(newGet(false, doc), mapper, randomSearcherWrapper())) {
            assertThat(getResult.exists(), equalTo(true));
            assertThat(getResult.docIdAndVersion(), notNullValue());
        }

        // now do an update
        document = testDocument();
        document.add(new TextField("value", "test1", Field.Store.YES));
        document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(SOURCE), SourceFieldMapper.Defaults.FIELD_TYPE));
        doc = testParsedDocument("1", null, document, SOURCE, null);
        engine.index(indexForDoc(doc));

        // its not updated yet...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 0));
        searchResult.close();

        // but, we can still get it (in realtime)
        try (Engine.GetResult getResult = engine.get(newGet(true, doc), mapper, randomSearcherWrapper())) {
            assertThat(getResult.exists(), equalTo(true));
            assertThat(getResult.docIdAndVersion(), notNullValue());
        }

        // refresh and it should be updated
        engine.refresh("test");

        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 1));
        searchResult.close();

        // now delete
        engine.delete(new Engine.Delete("test", "1", newUid(doc), primaryTerm.get()));

        // its not deleted yet
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 1));
        searchResult.close();

        // but, get should not see it (in realtime)
        try (Engine.GetResult getResult = engine.get(newGet(true, doc), mapper, randomSearcherWrapper())) {
            assertThat(getResult.exists(), equalTo(false));
        }

        // refresh and it should be deleted
        engine.refresh("test");

        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 0));
        searchResult.close();

        // add it back
        document = testDocumentWithTextField();
        document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(B_1), SourceFieldMapper.Defaults.FIELD_TYPE));
        doc = testParsedDocument("1", null, document, B_1, null);
        engine.index(new Engine.Index(newUid(doc), primaryTerm.get(), doc, Versions.MATCH_DELETED));

        // its not there...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 0));
        searchResult.close();

        // refresh and it should be there
        engine.refresh("test");

        // now its there...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 0));
        searchResult.close();

        // now flush
        engine.flush();

        // and, verify get (in real time)
        try (Engine.GetResult getResult = engine.get(newGet(true, doc), mapper, randomSearcherWrapper())) {
            assertThat(getResult.exists(), equalTo(true));
            assertThat(getResult.docIdAndVersion(), notNullValue());
        }

        // make sure we can still work with the engine
        // now do an update
        document = testDocument();
        document.add(new TextField("value", "test1", Field.Store.YES));
        doc = testParsedDocument("1", null, document, B_1, null);
        engine.index(indexForDoc(doc));

        // its not updated yet...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 0));
        searchResult.close();

        // refresh and it should be updated
        engine.refresh("test");

        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test1")), 1));
        searchResult.close();
    }

    public void testGetWithSearcherWrapper() throws Exception {
        engine.refresh("warm_up");
        final ParsedDocument doc = createParsedDoc("1", null);
        engine.index(indexForDoc(doc));
        final String type = doc.type();
        final DocumentMapper mapper = docMapper(type);
        assertThat(engine.lastRefreshedCheckpoint(), equalTo(NO_OPS_PERFORMED));
        try (Engine.GetResult get = engine.get(new Engine.Get(true, true, type, "1", newUid("1")), mapper, randomSearcherWrapper())) {
            // we do not track the translog location yet
            assertTrue(get.exists());
            assertFalse(get.isFromTranslog());
        }
        // refresh triggered, as we did not track translog location until the first realtime get.
        assertThat(engine.lastRefreshedCheckpoint(), equalTo(0L));

        engine.index(indexForDoc(createParsedDoc("1", null)));
        try (Engine.GetResult get = engine.get(new Engine.Get(true, true, type, "1", newUid("1")), mapper, searcher -> searcher)) {
            assertTrue(get.exists());
            assertTrue(get.isFromTranslog());
        }
        assertThat(engine.lastRefreshedCheckpoint(), equalTo(0L)); // no refresh; just read from translog
        if (randomBoolean()) {
            engine.index(indexForDoc(createParsedDoc("1", null)));
        }
        try (Engine.GetResult get = engine.get(new Engine.Get(true, true, type, "1", newUid("1")), mapper,
            searcher -> SearcherHelper.wrapSearcher(searcher, reader -> new MatchingDirectoryReader(reader, new MatchAllDocsQuery())))) {
            assertTrue(get.exists());
            assertFalse(get.isFromTranslog());
        }

        try (Engine.GetResult get = engine.get(new Engine.Get(true, true, type, "1", newUid("1")), mapper,
            searcher -> SearcherHelper.wrapSearcher(searcher, reader -> new MatchingDirectoryReader(reader, new MatchNoDocsQuery())))) {
            assertFalse(get.exists());
            assertFalse(get.isFromTranslog());
        }

        try (Engine.GetResult get = engine.get(new Engine.Get(true, true, type, "1", newUid("1")), mapper,
            searcher -> SearcherHelper.wrapSearcher(searcher, reader -> new MatchingDirectoryReader(reader, new TermQuery(newUid("1")))))) {
            assertTrue(get.exists());
            assertFalse(get.isFromTranslog());
        }

        try (Engine.GetResult get = engine.get(new Engine.Get(true, true, type, "1", newUid("1")), mapper,
            searcher -> SearcherHelper.wrapSearcher(searcher, reader -> new MatchingDirectoryReader(reader, new TermQuery(newUid("2")))))) {
            assertFalse(get.exists());
            assertFalse(get.isFromTranslog());
        }
        assertThat("no refresh, just read from translog or in-memory segment", engine.lastRefreshedCheckpoint(), equalTo(0L));
    }

    public void testSearchResultRelease() throws Exception {
        engine.refresh("warm_up");
        Engine.Searcher searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(0));
        searchResult.close();

        // create a document
        ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
        engine.index(indexForDoc(doc));

        // its not there...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(0));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 0));
        searchResult.close();

        // refresh and it should be there
        engine.refresh("test");

        // now its there...
        searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 1));
        // don't release the search result yet...

        // delete, refresh and do a new search, it should not be there
        engine.delete(new Engine.Delete("test", "1", newUid(doc), primaryTerm.get()));
        engine.refresh("test");
        Engine.Searcher updateSearchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(updateSearchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(0));
        updateSearchResult.close();

        // the non release search result should not see the deleted yet...
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(new TermQuery(new Term("value", "test")), 1));
        searchResult.close();
    }

    public void testCommitAdvancesMinTranslogForRecovery() throws IOException {
        IOUtils.close(engine, store);
        final Path translogPath = createTempDir();
        store = createStore();
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final LongSupplier globalCheckpointSupplier = () -> globalCheckpoint.get();
        engine = createEngine(config(defaultSettings, store, translogPath, newMergePolicy(), null, null,
            globalCheckpointSupplier));
        engine.onSettingsChanged(TimeValue.MINUS_ONE, ByteSizeValue.ZERO, randomNonNegativeLong());
        ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
        engine.index(indexForDoc(doc));
        boolean inSync = randomBoolean();
        if (inSync) {
            engine.syncTranslog(); // to advance persisted local checkpoint
            globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
        }

        engine.flush();
        assertThat(engine.getTranslog().currentFileGeneration(), equalTo(3L));
        assertThat(engine.getTranslog().getMinFileGeneration(), equalTo(inSync ? 3L : 2L));

        engine.flush();
        assertThat(engine.getTranslog().currentFileGeneration(), equalTo(3L));
        assertThat(engine.getTranslog().getMinFileGeneration(), equalTo(inSync ? 3L : 2L));

        engine.flush(true, true);
        assertThat(engine.getTranslog().currentFileGeneration(), equalTo(3L));
        assertThat(engine.getTranslog().getMinFileGeneration(), equalTo(inSync ? 3L : 2L));

        globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
        engine.flush(true, true);
        assertThat(engine.getTranslog().currentFileGeneration(), equalTo(3L));
        assertThat(engine.getTranslog().getMinFileGeneration(), equalTo(3L));
    }

    public void testSyncTranslogConcurrently() throws Exception {
        IOUtils.close(engine, store);
        final Path translogPath = createTempDir();
        store = createStore();
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        engine = createEngine(config(defaultSettings, store, translogPath, newMergePolicy(), null, null, globalCheckpoint::get));
        List<Engine.Operation> ops = generateHistoryOnReplica(between(1, 50), false, randomBoolean(), randomBoolean());
        applyOperations(engine, ops);
        engine.flush(true, true);
        final CheckedRunnable<IOException> checker = () -> {
            assertThat(engine.getTranslogStats().getUncommittedOperations(), equalTo(0));
            assertThat(engine.getLastSyncedGlobalCheckpoint(), equalTo(globalCheckpoint.get()));
            try (Engine.IndexCommitRef safeCommit = engine.acquireSafeIndexCommit()) {
                SequenceNumbers.CommitInfo commitInfo =
                    SequenceNumbers.loadSeqNoInfoFromLuceneCommit(safeCommit.getIndexCommit().getUserData().entrySet());
                assertThat(commitInfo.localCheckpoint, equalTo(engine.getProcessedLocalCheckpoint()));
            }
        };
        final Thread[] threads = new Thread[randomIntBetween(2, 4)];
        final Phaser phaser = new Phaser(threads.length);
        globalCheckpoint.set(engine.getProcessedLocalCheckpoint());
        for (int i = 0; i < threads.length; i++) {
            threads[i] = new Thread(() -> {
                phaser.arriveAndAwaitAdvance();
                try {
                    engine.syncTranslog();
                    checker.run();
                } catch (IOException e) {
                    throw new AssertionError(e);
                }
            });
            threads[i].start();
        }
        for (Thread thread : threads) {
            thread.join();
        }
        checker.run();
    }

    public void testSyncedFlush() throws IOException {
        try (Store store = createStore();
             Engine engine = createEngine(defaultSettings, store, createTempDir(), new LogByteSizeMergePolicy(), null)) {
            final String syncId = randomUnicodeOfCodepointLengthBetween(10, 20);
            ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            engine.index(indexForDoc(doc));
            Engine.CommitId commitID = engine.flush();
            assertThat(commitID, equalTo(new Engine.CommitId(store.readLastCommittedSegmentsInfo().getId())));
            byte[] wrongBytes = Base64.getDecoder().decode(commitID.toString());
            wrongBytes[0] = (byte) ~wrongBytes[0];
            Engine.CommitId wrongId = new Engine.CommitId(wrongBytes);
            assertEquals("should fail to sync flush with wrong id (but no docs)", engine.syncFlush(syncId + "1", wrongId),
                Engine.SyncedFlushResult.COMMIT_MISMATCH);
            engine.index(indexForDoc(doc));
            assertEquals("should fail to sync flush with right id but pending doc",
                engine.syncFlush(syncId + "2", commitID), Engine.SyncedFlushResult.PENDING_OPERATIONS);
            commitID = engine.flush();
            assertEquals("should succeed to flush commit with right id and no pending doc", engine.syncFlush(syncId, commitID),
                Engine.SyncedFlushResult.SUCCESS);
            assertEquals(store.readLastCommittedSegmentsInfo().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
            assertEquals(engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
        }
    }

    public void testRenewSyncFlush() throws Exception {
        final int iters = randomIntBetween(2, 5); // run this a couple of times to get some coverage
        for (int i = 0; i < iters; i++) {
            try (Store store = createStore();
                 InternalEngine engine =
                     createEngine(config(defaultSettings, store, createTempDir(), new LogDocMergePolicy(), null))) {
                final String syncId = randomUnicodeOfCodepointLengthBetween(10, 20);
                Engine.Index doc1 =
                    indexForDoc(testParsedDocument("1", null, testDocumentWithTextField(), B_1, null));
                engine.index(doc1);
                assertEquals(engine.getLastWriteNanos(), doc1.startTime());
                engine.flush();
                Engine.Index doc2 =
                    indexForDoc(testParsedDocument("2", null, testDocumentWithTextField(), B_1, null));
                engine.index(doc2);
                assertEquals(engine.getLastWriteNanos(), doc2.startTime());
                engine.flush();
                final boolean forceMergeFlushes = randomBoolean();
                final ParsedDocument parsedDoc3 =
                    testParsedDocument("3", null, testDocumentWithTextField(), B_1, null);
                if (forceMergeFlushes) {
                    engine.index(new Engine.Index(newUid(parsedDoc3), parsedDoc3, UNASSIGNED_SEQ_NO, 0,
                        Versions.MATCH_ANY, VersionType.INTERNAL, Engine.Operation.Origin.PRIMARY,
                        System.nanoTime() - engine.engineConfig.getFlushMergesAfter().nanos(),
                        -1, false, UNASSIGNED_SEQ_NO, 0));
                } else {
                    engine.index(indexForDoc(parsedDoc3));
                }
                Engine.CommitId commitID = engine.flush();
                assertEquals("should succeed to flush commit with right id and no pending doc", engine.syncFlush(syncId, commitID),
                    Engine.SyncedFlushResult.SUCCESS);
                assertEquals(3, engine.segments(false).size());

                engine.forceMerge(forceMergeFlushes, 1, false,
                    false, false, UUIDs.randomBase64UUID());
                if (forceMergeFlushes == false) {
                    engine.refresh("make all segments visible");
                    assertEquals(4, engine.segments(false).size());
                    assertEquals(store.readLastCommittedSegmentsInfo().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
                    assertEquals(engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
                    assertTrue(engine.tryRenewSyncCommit());
                    assertEquals(1, engine.segments(false).size());
                } else {
                    engine.refresh("test");
                    assertBusy(() -> assertEquals(1, engine.segments(false).size()));
                }
                assertEquals(store.readLastCommittedSegmentsInfo().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
                assertEquals(engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);

                if (randomBoolean()) {
                    Engine.Index doc4 =
                        indexForDoc(testParsedDocument("4", null, testDocumentWithTextField(), B_1, null));
                    engine.index(doc4);
                    assertEquals(engine.getLastWriteNanos(), doc4.startTime());
                } else {
                    Engine.Delete delete = new Engine.Delete(doc1.type(), doc1.id(), doc1.uid(), primaryTerm.get());
                    engine.delete(delete);
                    assertEquals(engine.getLastWriteNanos(), delete.startTime());
                }
                assertFalse(engine.tryRenewSyncCommit());
                // we might hit a concurrent flush from a finishing merge here - just wait if ongoing...
                engine.flush(false, true);
                assertNull(store.readLastCommittedSegmentsInfo().getUserData().get(Engine.SYNC_COMMIT_ID));
                assertNull(engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID));
            }
        }
    }

    public void testSyncedFlushSurvivesEngineRestart() throws IOException {
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        IOUtils.close(store, engine);
        store = createStore();
        engine = createEngine(store, primaryTranslogDir, globalCheckpoint::get);
        final String syncId = randomUnicodeOfCodepointLengthBetween(10, 20);
        ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
            new BytesArray("{}"), null);
        engine.index(indexForDoc(doc));
        globalCheckpoint.set(0L);
        final Engine.CommitId commitID = engine.flush();
        assertEquals("should succeed to flush commit with right id and no pending doc", engine.syncFlush(syncId, commitID),
            Engine.SyncedFlushResult.SUCCESS);
        assertEquals(store.readLastCommittedSegmentsInfo().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
        assertEquals(engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
        EngineConfig config = engine.config();
        if (randomBoolean()) {
            engine.close();
        } else {
            engine.flushAndClose();
        }
        if (randomBoolean()) {
            final String translogUUID = Translog.createEmptyTranslog(config.getTranslogConfig().getTranslogPath(),
                UNASSIGNED_SEQ_NO, shardId, primaryTerm.get());
            store.associateIndexWithNewTranslog(translogUUID);
        }
        engine = new InternalEngine(config);
        engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
        assertEquals(engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
    }

    public void testSyncedFlushVanishesOnReplay() throws IOException {
        final String syncId = randomUnicodeOfCodepointLengthBetween(10, 20);
        ParsedDocument doc = testParsedDocument("1", null,
            testDocumentWithTextField(), new BytesArray("{}"), null);
        engine.index(indexForDoc(doc));
        final Engine.CommitId commitID = engine.flush();
        assertEquals("should succeed to flush commit with right id and no pending doc", engine.syncFlush(syncId, commitID),
            Engine.SyncedFlushResult.SUCCESS);
        assertEquals(store.readLastCommittedSegmentsInfo().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
        assertEquals(engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID), syncId);
        doc = testParsedDocument("2", null, testDocumentWithTextField(), new BytesArray("{}"), null);
        engine.index(indexForDoc(doc));
        EngineConfig config = engine.config();
        engine.close();
        engine = new InternalEngine(config);
        engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
        assertNull("Sync ID must be gone since we have a document to replay",
            engine.getLastCommittedSegmentInfos().getUserData().get(Engine.SYNC_COMMIT_ID));
    }

    public void testVersioningNewCreate() throws IOException {
        ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
        Engine.Index create = new Engine.Index(newUid(doc), primaryTerm.get(), doc, Versions.MATCH_DELETED);
        Engine.IndexResult indexResult = engine.index(create);
        assertThat(indexResult.getVersion(), equalTo(1L));

        create = new Engine.Index(newUid(doc), doc, indexResult.getSeqNo(), create.primaryTerm(), indexResult.getVersion(),
            null, REPLICA, 0, -1, false, UNASSIGNED_SEQ_NO, 0);
        indexResult = replicaEngine.index(create);
        assertThat(indexResult.getVersion(), equalTo(1L));
    }

    public void testReplicatedVersioningWithFlush() throws IOException {
        ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
        Engine.Index create = new Engine.Index(newUid(doc), primaryTerm.get(), doc, Versions.MATCH_DELETED);
        Engine.IndexResult indexResult = engine.index(create);
        assertThat(indexResult.getVersion(), equalTo(1L));
        assertTrue(indexResult.isCreated());


        create = new Engine.Index(newUid(doc), doc, indexResult.getSeqNo(), create.primaryTerm(), indexResult.getVersion(),
            null, REPLICA, 0, -1, false, UNASSIGNED_SEQ_NO, 0);
        indexResult = replicaEngine.index(create);
        assertThat(indexResult.getVersion(), equalTo(1L));
        assertTrue(indexResult.isCreated());

        if (randomBoolean()) {
            engine.flush();
        }
        if (randomBoolean()) {
            replicaEngine.flush();
        }

        Engine.Index update = new Engine.Index(newUid(doc), primaryTerm.get(), doc, 1);
        Engine.IndexResult updateResult = engine.index(update);
        assertThat(updateResult.getVersion(), equalTo(2L));
        assertFalse(updateResult.isCreated());


        update = new Engine.Index(newUid(doc), doc, updateResult.getSeqNo(), update.primaryTerm(), updateResult.getVersion(),
            null, REPLICA, 0, -1, false, UNASSIGNED_SEQ_NO, 0);
        updateResult = replicaEngine.index(update);
        assertThat(updateResult.getVersion(), equalTo(2L));
        assertFalse(updateResult.isCreated());
        replicaEngine.refresh("test");
        try (Engine.Searcher searcher = replicaEngine.acquireSearcher("test")) {
            assertEquals(1, searcher.getDirectoryReader().numDocs());
        }

        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            assertEquals(1, searcher.getDirectoryReader().numDocs());
        }
    }

    /**
     * simulates what an upsert / update API does
     */
    public void testVersionedUpdate() throws IOException {
        ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
        Engine.Index create = new Engine.Index(newUid(doc), primaryTerm.get(), doc, Versions.MATCH_DELETED);
        Engine.IndexResult indexResult = engine.index(create);
        assertThat(indexResult.getVersion(), equalTo(1L));
        final DocumentMapper mapper = docMapper(doc.type());
        try (Engine.GetResult get =
                 engine.get(new Engine.Get(true, false, doc.type(), doc.id(), create.uid()), mapper, randomSearcherWrapper())) {
            assertEquals(1, get.version());
        }

        Engine.Index update_1 = new Engine.Index(newUid(doc), primaryTerm.get(), doc, 1);
        Engine.IndexResult update_1_result = engine.index(update_1);
        assertThat(update_1_result.getVersion(), equalTo(2L));

        try (Engine.GetResult get =
                 engine.get(new Engine.Get(true, false, doc.type(), doc.id(), create.uid()), mapper, randomSearcherWrapper())) {
            assertEquals(2, get.version());
        }

        Engine.Index update_2 = new Engine.Index(newUid(doc), primaryTerm.get(), doc, 2);
        Engine.IndexResult update_2_result = engine.index(update_2);
        assertThat(update_2_result.getVersion(), equalTo(3L));

        try (Engine.GetResult get =
                 engine.get(new Engine.Get(true, false, doc.type(), doc.id(), create.uid()), mapper, randomSearcherWrapper())) {
            assertEquals(3, get.version());
        }

    }

    public void testGetIfSeqNoIfPrimaryTerm() throws IOException {

        ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
        Engine.Index create = new Engine.Index(newUid(doc), primaryTerm.get(), doc, Versions.MATCH_DELETED);
        Engine.IndexResult indexResult = engine.index(create);
        if (randomBoolean()) {
            engine.refresh("test");
        }
        if (randomBoolean()) {
            engine.flush();
        }
        try (Engine.GetResult get = engine.get(
            new Engine.Get(true, true, doc.type(), doc.id(), create.uid())
                .setIfSeqNo(indexResult.getSeqNo()).setIfPrimaryTerm(primaryTerm.get()),
            docMapper(doc.type()), randomSearcherWrapper())) {
            assertEquals(indexResult.getSeqNo(), get.docIdAndVersion().seqNo);
        }

        expectThrows(VersionConflictEngineException.class, () -> engine.get(new Engine.Get(true, false, doc.type(), doc.id(), create.uid())
                .setIfSeqNo(indexResult.getSeqNo() + 1).setIfPrimaryTerm(primaryTerm.get()),
            docMapper(doc.type()), randomSearcherWrapper()));

        expectThrows(VersionConflictEngineException.class, () -> engine.get(new Engine.Get(true, false, doc.type(), doc.id(), create.uid())
                .setIfSeqNo(indexResult.getSeqNo()).setIfPrimaryTerm(primaryTerm.get() + 1),
            docMapper(doc.type()), randomSearcherWrapper()));

        final VersionConflictEngineException versionConflictEngineException = expectThrows(VersionConflictEngineException.class,
                    () -> engine.get(new Engine.Get(true, false, doc.type(), doc.id(), create.uid())
                .setIfSeqNo(indexResult.getSeqNo() + 1).setIfPrimaryTerm(primaryTerm.get() + 1),
            docMapper(doc.type()), randomSearcherWrapper()));
        assertThat(versionConflictEngineException.getStackTrace(), emptyArray());
    }

    public void testVersioningNewIndex() throws IOException {
        ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
        Engine.Index index = indexForDoc(doc);
        Engine.IndexResult indexResult = engine.index(index);
        assertThat(indexResult.getVersion(), equalTo(1L));

        index = new Engine.Index(newUid(doc), doc, indexResult.getSeqNo(), index.primaryTerm(), indexResult.getVersion(),
            null, REPLICA, 0, -1, false, UNASSIGNED_SEQ_NO, 0);
        indexResult = replicaEngine.index(index);
        assertThat(indexResult.getVersion(), equalTo(1L));
    }

    public void testForceMergeWithoutSoftDeletes() throws IOException {
        Settings settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), false).build();
        IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        try (Store store = createStore();
             Engine engine = createEngine(config(IndexSettingsModule.newIndexSettings(indexMetadata), store, createTempDir(),
                 new LogByteSizeMergePolicy(), null))) { // use log MP here we test some behavior in ESMP
            int numDocs = randomIntBetween(10, 100);
            for (int i = 0; i < numDocs; i++) {
                ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1, null);
                Engine.Index index = indexForDoc(doc);
                engine.index(index);
                engine.refresh("test");
            }
            try (Engine.Searcher test = engine.acquireSearcher("test")) {
                assertEquals(numDocs, test.getIndexReader().numDocs());
            }
            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
            engine.refresh("test");
            assertEquals(engine.segments(true).size(), 1);

            ParsedDocument doc = testParsedDocument(Integer.toString(0), null, testDocument(), B_1, null);
            Engine.Index index = indexForDoc(doc);
            engine.delete(new Engine.Delete(index.type(), index.id(), index.uid(), primaryTerm.get()));
            //expunge deletes
            engine.forceMerge(true, 10, true, false, false, UUIDs.randomBase64UUID());
            engine.refresh("test");

            assertEquals(engine.segments(true).size(), 1);
            try (Engine.Searcher test = engine.acquireSearcher("test")) {
                assertEquals(numDocs - 1, test.getIndexReader().numDocs());
                assertEquals(engine.config().getMergePolicy().toString(), numDocs - 1, test.getIndexReader().maxDoc());
            }

            doc = testParsedDocument(Integer.toString(1), null, testDocument(), B_1, null);
            index = indexForDoc(doc);
            engine.delete(new Engine.Delete(index.type(), index.id(), index.uid(), primaryTerm.get()));
            //expunge deletes
            engine.forceMerge(true, 10, false, false, false, UUIDs.randomBase64UUID());
            engine.refresh("test");
            assertEquals(engine.segments(true).size(), 1);
            try (Engine.Searcher test = engine.acquireSearcher("test")) {
                assertEquals(numDocs - 2, test.getIndexReader().numDocs());
                assertEquals(numDocs - 1, test.getIndexReader().maxDoc());
            }
        }
    }

    /*
     * we are testing an edge case here where we have a fully deleted segment that is retained but has all it's IDs pruned away.
     */
    public void testLookupVersionWithPrunedAwayIds() throws IOException {
        try (Directory dir = newDirectory()) {
            IndexWriterConfig indexWriterConfig = new IndexWriterConfig(Lucene.STANDARD_ANALYZER);
            indexWriterConfig.setSoftDeletesField(Lucene.SOFT_DELETES_FIELD);
            try (IndexWriter writer = new IndexWriter(dir,
                indexWriterConfig.setMergePolicy(new SoftDeletesRetentionMergePolicy(Lucene.SOFT_DELETES_FIELD,
                    MatchAllDocsQuery::new, new PrunePostingsMergePolicy(indexWriterConfig.getMergePolicy(), "_id"))))) {
                org.apache.lucene.document.Document doc = new org.apache.lucene.document.Document();
                doc.add(new Field(IdFieldMapper.NAME, "1", IdFieldMapper.Defaults.FIELD_TYPE));
                doc.add(new NumericDocValuesField(VersionFieldMapper.NAME, -1));
                doc.add(new NumericDocValuesField(SeqNoFieldMapper.NAME, 1));
                doc.add(new NumericDocValuesField(SeqNoFieldMapper.PRIMARY_TERM_NAME, 1));
                writer.addDocument(doc);
                writer.flush();
                writer.softUpdateDocument(new Term(IdFieldMapper.NAME, "1"), doc, new NumericDocValuesField(Lucene.SOFT_DELETES_FIELD, 1));
                writer.updateNumericDocValue(new Term(IdFieldMapper.NAME, "1"), Lucene.SOFT_DELETES_FIELD, 1);
                writer.forceMerge(1);
                try (DirectoryReader reader = DirectoryReader.open(writer)) {
                    assertEquals(1, reader.leaves().size());
                    assertNull(VersionsAndSeqNoResolver.loadDocIdAndVersion(reader, new Term(IdFieldMapper.NAME, "1"), false));
                }
            }
        }
    }

    public void testUpdateWithFullyDeletedSegments() throws IOException {
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true)
            .put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), Integer.MAX_VALUE);
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final Set<String> liveDocs = new HashSet<>();
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), newMergePolicy(), null,
                 null, globalCheckpoint::get))) {
            int numDocs = scaledRandomIntBetween(10, 100);
            for (int i = 0; i < numDocs; i++) {
                ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1, null);
                engine.index(indexForDoc(doc));
                liveDocs.add(doc.id());
            }

            for (int i = 0; i < numDocs; i++) {
                ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1, null);
                engine.index(indexForDoc(doc));
                liveDocs.add(doc.id());
            }
        }
    }

    public void testForceMergeWithSoftDeletesRetention() throws Exception {
        final long retainedExtraOps = randomLongBetween(0, 10);
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true)
            .put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), retainedExtraOps);
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final MapperService mapperService = createMapperService("test");
        final Set<String> liveDocs = new HashSet<>();
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), newMergePolicy(), null,
                 null, globalCheckpoint::get))) {
            int numDocs = scaledRandomIntBetween(10, 100);
            for (int i = 0; i < numDocs; i++) {
                ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1, null);
                engine.index(indexForDoc(doc));
                liveDocs.add(doc.id());
            }
            for (int i = 0; i < numDocs; i++) {
                ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1, null);
                if (randomBoolean()) {
                    engine.delete(new Engine.Delete(doc.type(), doc.id(), newUid(doc.id()), primaryTerm.get()));
                    liveDocs.remove(doc.id());
                }
                if (randomBoolean()) {
                    engine.index(indexForDoc(doc));
                    liveDocs.add(doc.id());
                }
                if (randomBoolean()) {
                    engine.flush(randomBoolean(), true);
                }
            }
            engine.flush();

            long localCheckpoint = engine.getProcessedLocalCheckpoint();
            globalCheckpoint.set(randomLongBetween(0, localCheckpoint));
            engine.syncTranslog();
            final long safeCommitCheckpoint;
            try (Engine.IndexCommitRef safeCommit = engine.acquireSafeIndexCommit()) {
                safeCommitCheckpoint = Long.parseLong(safeCommit.getIndexCommit().getUserData().get(SequenceNumbers.LOCAL_CHECKPOINT_KEY));
            }
            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
            assertConsistentHistoryBetweenTranslogAndLuceneIndex(engine, mapperService);
            Map<Long, Translog.Operation> ops = readAllOperationsInLucene(engine, mapperService)
                .stream().collect(Collectors.toMap(Translog.Operation::seqNo, Function.identity()));
            for (long seqno = 0; seqno <= localCheckpoint; seqno++) {
                long minSeqNoToRetain = Math.min(globalCheckpoint.get() + 1 - retainedExtraOps, safeCommitCheckpoint + 1);
                String msg = "seq# [" + seqno + "], global checkpoint [" + globalCheckpoint + "], retained-ops [" + retainedExtraOps + "]";
                if (seqno < minSeqNoToRetain) {
                    Translog.Operation op = ops.get(seqno);
                    if (op != null) {
                        assertThat(op, instanceOf(Translog.Index.class));
                        assertThat(msg, ((Translog.Index) op).id(), is(in(liveDocs)));
                        assertEquals(msg, ((Translog.Index) op).source(), B_1);
                    }
                } else {
                    assertThat(msg, ops.get(seqno), notNullValue());
                }
            }
            settings.put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), 0);
            indexSettings.updateIndexMetadata(IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
            engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
                indexSettings.getSoftDeleteRetentionOperations());
            globalCheckpoint.set(localCheckpoint);
            engine.syncTranslog();

            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
            assertConsistentHistoryBetweenTranslogAndLuceneIndex(engine, mapperService);
            assertThat(readAllOperationsInLucene(engine, mapperService), hasSize(liveDocs.size()));
        }
    }

    public void testForceMergeWithSoftDeletesRetentionAndRecoverySource() throws Exception {
        final long retainedExtraOps = randomLongBetween(0, 10);
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true)
            .put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), retainedExtraOps);
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final MapperService mapperService = createMapperService("test");
        final boolean omitSourceAllTheTime = randomBoolean();
        final Set<String> liveDocs = new HashSet<>();
        final Set<String> liveDocsWithSource = new HashSet<>();
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), newMergePolicy(), null,
                 null,
                 globalCheckpoint::get))) {
            int numDocs = scaledRandomIntBetween(10, 100);
            for (int i = 0; i < numDocs; i++) {
                boolean useRecoverySource = randomBoolean() || omitSourceAllTheTime;
                ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1, null,
                    useRecoverySource);
                engine.index(indexForDoc(doc));
                liveDocs.add(doc.id());
                if (useRecoverySource == false) {
                    liveDocsWithSource.add(Integer.toString(i));
                }
            }
            for (int i = 0; i < numDocs; i++) {
                boolean useRecoverySource = randomBoolean() || omitSourceAllTheTime;
                ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1, null,
                    useRecoverySource);
                if (randomBoolean()) {
                    engine.delete(new Engine.Delete(doc.type(), doc.id(), newUid(doc.id()), primaryTerm.get()));
                    liveDocs.remove(doc.id());
                    liveDocsWithSource.remove(doc.id());
                }
                if (randomBoolean()) {
                    engine.index(indexForDoc(doc));
                    liveDocs.add(doc.id());
                    if (useRecoverySource == false) {
                        liveDocsWithSource.add(doc.id());
                    } else {
                        liveDocsWithSource.remove(doc.id());
                    }
                }
                if (randomBoolean()) {
                    engine.flush(randomBoolean(), true);
                }
            }
            engine.flush();
            globalCheckpoint.set(randomLongBetween(0, engine.getPersistedLocalCheckpoint()));
            engine.syncTranslog();
            final long minSeqNoToRetain;
            try (Engine.IndexCommitRef safeCommit = engine.acquireSafeIndexCommit()) {
                long safeCommitLocalCheckpoint = Long.parseLong(
                    safeCommit.getIndexCommit().getUserData().get(SequenceNumbers.LOCAL_CHECKPOINT_KEY));
                minSeqNoToRetain = Math.min(globalCheckpoint.get() + 1 - retainedExtraOps, safeCommitLocalCheckpoint + 1);
            }
            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
            assertConsistentHistoryBetweenTranslogAndLuceneIndex(engine, mapperService);
            Map<Long, Translog.Operation> ops = readAllOperationsInLucene(engine, mapperService)
                .stream().collect(Collectors.toMap(Translog.Operation::seqNo, Function.identity()));
            for (long seqno = 0; seqno <= engine.getPersistedLocalCheckpoint(); seqno++) {
                String msg = "seq# [" + seqno + "], global checkpoint [" + globalCheckpoint + "], retained-ops [" + retainedExtraOps + "]";
                if (seqno < minSeqNoToRetain) {
                    Translog.Operation op = ops.get(seqno);
                    if (op != null) {
                        assertThat(op, instanceOf(Translog.Index.class));
                        assertThat(msg, ((Translog.Index) op).id(), is(in(liveDocs)));
                    }
                } else {
                    Translog.Operation op = ops.get(seqno);
                    assertThat(msg, op, notNullValue());
                    if (op instanceof Translog.Index) {
                        assertEquals(msg, ((Translog.Index) op).source(), B_1);
                    }
                }
            }
            settings.put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), 0);
            indexSettings.updateIndexMetadata(IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
            engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
                indexSettings.getSoftDeleteRetentionOperations());
            // If we already merged down to 1 segment, then the next force-merge will be a noop. We need to add an extra segment to make
            // merges happen so we can verify that _recovery_source are pruned. See: https://github.com/elastic/elasticsearch/issues/41628.
            final int numSegments;
            try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                numSegments = searcher.getDirectoryReader().leaves().size();
            }
            if (numSegments == 1) {
                boolean useRecoverySource = randomBoolean() || omitSourceAllTheTime;
                ParsedDocument doc = testParsedDocument("dummy", null, testDocument(), B_1, null, useRecoverySource);
                engine.index(indexForDoc(doc));
                if (useRecoverySource == false) {
                    liveDocsWithSource.add(doc.id());
                }
                engine.syncTranslog();
                globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
                engine.flush(randomBoolean(), true);
            } else {
                globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
                engine.syncTranslog();
            }
            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
            assertConsistentHistoryBetweenTranslogAndLuceneIndex(engine, mapperService);
            assertThat(readAllOperationsInLucene(engine, mapperService), hasSize(liveDocsWithSource.size()));
        }
    }

    public void testForceMergeAndClose() throws IOException, InterruptedException {
        int numIters = randomIntBetween(2, 10);
        for (int j = 0; j < numIters; j++) {
            try (Store store = createStore()) {
                final InternalEngine engine = createEngine(store, createTempDir());
                final CountDownLatch startGun = new CountDownLatch(1);
                final CountDownLatch indexed = new CountDownLatch(1);

                Thread thread = new Thread() {
                    @Override
                    public void run() {
                        try {
                            try {
                                startGun.await();
                            } catch (InterruptedException e) {
                                throw new RuntimeException(e);
                            }
                            int i = 0;
                            while (true) {
                                int numDocs = randomIntBetween(1, 20);
                                for (int j = 0; j < numDocs; j++) {
                                    i++;
                                    ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), B_1,
                                        null);
                                    Engine.Index index = indexForDoc(doc);
                                    engine.index(index);
                                }
                                engine.refresh("test");
                                indexed.countDown();
                                try {
                                    engine.forceMerge(randomBoolean(), 1, false, randomBoolean(),
                                        randomBoolean(), UUIDs.randomBase64UUID());
                                } catch (IOException e) {
                                    return;
                                }
                            }
                        } catch (AlreadyClosedException ex) {
                            // fine
                        } catch (IOException e) {
                            throw new AssertionError(e);
                        }
                    }
                };

                thread.start();
                startGun.countDown();
                int someIters = randomIntBetween(1, 10);
                for (int i = 0; i < someIters; i++) {
                    engine.forceMerge(randomBoolean(), 1, false, randomBoolean(), randomBoolean(), UUIDs.randomBase64UUID());
                }
                indexed.await();
                IOUtils.close(engine);
                thread.join();
            }
        }

    }

    public void testVersioningCreateExistsException() throws IOException {
        ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
        Engine.Index create = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1,
            Versions.MATCH_DELETED, VersionType.INTERNAL, PRIMARY, 0, -1, false, UNASSIGNED_SEQ_NO, 0);
        Engine.IndexResult indexResult = engine.index(create);
        assertThat(indexResult.getVersion(), equalTo(1L));

        create = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1, Versions.MATCH_DELETED,
            VersionType.INTERNAL, PRIMARY, 0, -1, false, UNASSIGNED_SEQ_NO, 0);
        indexResult = engine.index(create);
        assertThat(indexResult.getResultType(), equalTo(Engine.Result.Type.FAILURE));
        assertThat(indexResult.getFailure(), instanceOf(VersionConflictEngineException.class));
    }

    public void testOutOfOrderDocsOnReplica() throws IOException {
        final List<Engine.Operation> ops = generateSingleDocHistory(true,
            randomFrom(VersionType.INTERNAL, VersionType.EXTERNAL, VersionType.EXTERNAL_GTE),
            2, 2, 20, "1");
        assertOpsOnReplica(ops, replicaEngine, true, logger);
    }

    public void testConcurrentOutOfOrderDocsOnReplica() throws IOException, InterruptedException {
        final List<Engine.Operation> opsDoc1 =
            generateSingleDocHistory(true, randomFrom(VersionType.INTERNAL, VersionType.EXTERNAL),
                2, 100, 300, "1");
        final Engine.Operation lastOpDoc1 = opsDoc1.get(opsDoc1.size() - 1);
        final String lastFieldValueDoc1;
        if (lastOpDoc1 instanceof Engine.Index) {
            Engine.Index index = (Engine.Index) lastOpDoc1;
            lastFieldValueDoc1 = index.docs().get(0).get("value");
        } else {
            // delete
            lastFieldValueDoc1 = null;
        }
        final List<Engine.Operation> opsDoc2 =
            generateSingleDocHistory(true, randomFrom(VersionType.INTERNAL, VersionType.EXTERNAL),
                2, 100, 300, "2");
        final Engine.Operation lastOpDoc2 = opsDoc2.get(opsDoc2.size() - 1);
        final String lastFieldValueDoc2;
        if (lastOpDoc2 instanceof Engine.Index) {
            Engine.Index index = (Engine.Index) lastOpDoc2;
            lastFieldValueDoc2 = index.docs().get(0).get("value");
        } else {
            // delete
            lastFieldValueDoc2 = null;
        }
        // randomly interleave
        final AtomicLong seqNoGenerator = new AtomicLong();
        BiFunction<Engine.Operation, Long, Engine.Operation> seqNoUpdater = (operation, newSeqNo) -> {
            if (operation instanceof Engine.Index) {
                Engine.Index index = (Engine.Index) operation;
                Document doc = testDocumentWithTextField(index.docs().get(0).get("value"));
                ParsedDocument parsedDocument = testParsedDocument(index.id(), index.routing(), doc, index.source(), null);
                return new Engine.Index(index.uid(), parsedDocument, newSeqNo, index.primaryTerm(), index.version(),
                    index.versionType(), index.origin(), index.startTime(), index.getAutoGeneratedIdTimestamp(), index.isRetry(),
                    UNASSIGNED_SEQ_NO, 0);
            } else {
                Engine.Delete delete = (Engine.Delete) operation;
                return new Engine.Delete(delete.type(), delete.id(), delete.uid(), newSeqNo, delete.primaryTerm(),
                    delete.version(), delete.versionType(), delete.origin(), delete.startTime(), UNASSIGNED_SEQ_NO, 0);
            }
        };
        final List<Engine.Operation> allOps = new ArrayList<>();
        Iterator<Engine.Operation> iter1 = opsDoc1.iterator();
        Iterator<Engine.Operation> iter2 = opsDoc2.iterator();
        while (iter1.hasNext() && iter2.hasNext()) {
            final Engine.Operation next = randomBoolean() ? iter1.next() : iter2.next();
            allOps.add(seqNoUpdater.apply(next, seqNoGenerator.getAndIncrement()));
        }
        iter1.forEachRemaining(o -> allOps.add(seqNoUpdater.apply(o, seqNoGenerator.getAndIncrement())));
        iter2.forEachRemaining(o -> allOps.add(seqNoUpdater.apply(o, seqNoGenerator.getAndIncrement())));
        // insert some duplicates
        randomSubsetOf(allOps).forEach(op -> allOps.add(seqNoUpdater.apply(op, op.seqNo())));

        shuffle(allOps, random());
        concurrentlyApplyOps(allOps, engine);

        engine.refresh("test");

        if (lastFieldValueDoc1 != null) {
            try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                final TotalHitCountCollector collector = new TotalHitCountCollector();
                searcher.search(new TermQuery(new Term("value", lastFieldValueDoc1)), collector);
                assertThat(collector.getTotalHits(), equalTo(1));
            }
        }
        if (lastFieldValueDoc2 != null) {
            try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                final TotalHitCountCollector collector = new TotalHitCountCollector();
                searcher.search(new TermQuery(new Term("value", lastFieldValueDoc2)), collector);
                assertThat(collector.getTotalHits(), equalTo(1));
            }
        }

        int totalExpectedOps = 0;
        if (lastFieldValueDoc1 != null) {
            totalExpectedOps++;
        }
        if (lastFieldValueDoc2 != null) {
            totalExpectedOps++;
        }
        assertVisibleCount(engine, totalExpectedOps);
    }

    public void testInternalVersioningOnPrimary() throws IOException {
        final List<Engine.Operation> ops = generateSingleDocHistory(false, VersionType.INTERNAL,
            2, 2, 20, "1");
        assertOpsOnPrimary(ops, Versions.NOT_FOUND, true, engine);
    }

    public void testVersionOnPrimaryWithConcurrentRefresh() throws Exception {
        List<Engine.Operation> ops = generateSingleDocHistory(false, VersionType.INTERNAL,
            2, 10, 100, "1");
        CountDownLatch latch = new CountDownLatch(1);
        AtomicBoolean running = new AtomicBoolean(true);
        Thread refreshThread = new Thread(() -> {
            latch.countDown();
            while (running.get()) {
                engine.refresh("test");
            }
        });
        refreshThread.start();
        try {
            latch.await();
            assertOpsOnPrimary(ops, Versions.NOT_FOUND, true, engine);
        } finally {
            running.set(false);
            refreshThread.join();
        }
    }

    private int assertOpsOnPrimary(List<Engine.Operation> ops, long currentOpVersion, boolean docDeleted, InternalEngine engine)
        throws IOException {
        String lastFieldValue = null;
        int opsPerformed = 0;
        long lastOpVersion = currentOpVersion;
        long lastOpSeqNo = UNASSIGNED_SEQ_NO;
        long lastOpTerm = UNASSIGNED_PRIMARY_TERM;
        PrimaryTermSupplier currentTerm = (PrimaryTermSupplier) engine.engineConfig.getPrimaryTermSupplier();
        BiFunction<Long, Engine.Index, Engine.Index> indexWithVersion = (version, index) -> new Engine.Index(index.uid(), index.parsedDoc(),
            UNASSIGNED_SEQ_NO, currentTerm.get(), version, index.versionType(), index.origin(), index.startTime(),
            index.getAutoGeneratedIdTimestamp(), index.isRetry(), UNASSIGNED_SEQ_NO, 0);
        BiFunction<Long, Engine.Delete, Engine.Delete> delWithVersion = (version, delete) -> new Engine.Delete(delete.type(), delete.id(),
            delete.uid(), UNASSIGNED_SEQ_NO, currentTerm.get(), version, delete.versionType(), delete.origin(), delete.startTime(),
            UNASSIGNED_SEQ_NO, 0);
        TriFunction<Long, Long, Engine.Index, Engine.Index> indexWithSeq = (seqNo, term, index) -> new Engine.Index(index.uid(),
            index.parsedDoc(), UNASSIGNED_SEQ_NO, currentTerm.get(), index.version(), index.versionType(), index.origin(),
            index.startTime(), index.getAutoGeneratedIdTimestamp(), index.isRetry(), seqNo, term);
        TriFunction<Long, Long, Engine.Delete, Engine.Delete> delWithSeq = (seqNo, term, delete) -> new Engine.Delete(delete.type(),
            delete.id(), delete.uid(), UNASSIGNED_SEQ_NO, currentTerm.get(), delete.version(), delete.versionType(), delete.origin(),
            delete.startTime(), seqNo, term);
        Function<Engine.Index, Engine.Index> indexWithCurrentTerm = index -> new Engine.Index(index.uid(),
            index.parsedDoc(), UNASSIGNED_SEQ_NO, currentTerm.get(), index.version(), index.versionType(), index.origin(),
            index.startTime(), index.getAutoGeneratedIdTimestamp(), index.isRetry(), index.getIfSeqNo(), index.getIfPrimaryTerm());
        Function<Engine.Delete, Engine.Delete> deleteWithCurrentTerm = delete -> new Engine.Delete(delete.type(),
            delete.id(), delete.uid(), UNASSIGNED_SEQ_NO, currentTerm.get(), delete.version(), delete.versionType(), delete.origin(),
            delete.startTime(), delete.getIfSeqNo(), delete.getIfPrimaryTerm());
        for (Engine.Operation op : ops) {
            final boolean versionConflict = rarely();
            final boolean versionedOp = versionConflict || randomBoolean();
            final long conflictingVersion = docDeleted || randomBoolean() ?
                lastOpVersion + (randomBoolean() ? 1 : -1) :
                Versions.MATCH_DELETED;
            final long conflictingSeqNo = lastOpSeqNo == UNASSIGNED_SEQ_NO  || randomBoolean() ?
                lastOpSeqNo + 5 : // use 5 to go above 0 for magic numbers
                lastOpSeqNo;
            final long conflictingTerm = conflictingSeqNo == lastOpSeqNo || randomBoolean() ? lastOpTerm + 1 : lastOpTerm;
            if (rarely()) {
                currentTerm.set(currentTerm.get() + 1L);
                engine.rollTranslogGeneration();
            }
            final long correctVersion = docDeleted ? Versions.MATCH_DELETED : lastOpVersion;
            logger.info("performing [{}]{}{}",
                op.operationType().name().charAt(0),
                versionConflict ? " (conflict " + conflictingVersion + ")" : "",
                versionedOp ? " (versioned " + correctVersion + ", seqNo " + lastOpSeqNo + ", term " + lastOpTerm + " )" : "");
            if (op instanceof Engine.Index) {
                final Engine.Index index = (Engine.Index) op;
                if (versionConflict) {
                    // generate a conflict
                    final Engine.IndexResult result;
                    if (randomBoolean()) {
                        result = engine.index(indexWithSeq.apply(conflictingSeqNo, conflictingTerm, index));
                    } else {
                        result = engine.index(indexWithVersion.apply(conflictingVersion, index));
                    }
                    assertThat(result.isCreated(), equalTo(false));
                    assertThat(result.getVersion(), equalTo(lastOpVersion));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.FAILURE));
                    assertThat(result.getFailure(), instanceOf(VersionConflictEngineException.class));
                    assertThat(result.getFailure().getStackTrace(), emptyArray());
                } else {
                    final Engine.IndexResult result;
                    if (versionedOp) {
                        // TODO: add support for non-existing docs
                        if (randomBoolean() && lastOpSeqNo != SequenceNumbers.UNASSIGNED_SEQ_NO && docDeleted == false) {
                            result = engine.index(indexWithSeq.apply(lastOpSeqNo, lastOpTerm, index));
                        } else {
                            result = engine.index(indexWithVersion.apply(correctVersion, index));
                        }
                    } else {
                        result = engine.index(indexWithCurrentTerm.apply(index));
                    }
                    assertThat(result.isCreated(), equalTo(docDeleted));
                    assertThat(result.getVersion(), equalTo(Math.max(lastOpVersion + 1, 1)));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.SUCCESS));
                    assertThat(result.getFailure(), nullValue());
                    lastFieldValue = index.docs().get(0).get("value");
                    docDeleted = false;
                    lastOpVersion = result.getVersion();
                    lastOpSeqNo = result.getSeqNo();
                    lastOpTerm = result.getTerm();
                    opsPerformed++;
                }
            } else {
                final Engine.Delete delete = (Engine.Delete) op;
                if (versionConflict) {
                    // generate a conflict
                    Engine.DeleteResult result;
                    if (randomBoolean()) {
                        result = engine.delete(delWithSeq.apply(conflictingSeqNo, conflictingTerm, delete));
                    } else {
                        result = engine.delete(delWithVersion.apply(conflictingVersion, delete));
                    }
                    assertThat(result.isFound(), equalTo(docDeleted == false));
                    assertThat(result.getVersion(), equalTo(lastOpVersion));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.FAILURE));
                    assertThat(result.getFailure(), instanceOf(VersionConflictEngineException.class));
                    assertThat(result.getFailure().getStackTrace(), emptyArray());
                } else {
                    final Engine.DeleteResult result;
                    long correctSeqNo = docDeleted ? UNASSIGNED_SEQ_NO : lastOpSeqNo;
                    if (versionedOp && lastOpSeqNo != UNASSIGNED_SEQ_NO && randomBoolean()) {
                        result = engine.delete(delWithSeq.apply(correctSeqNo, lastOpTerm, delete));
                    } else if (versionedOp) {
                        result = engine.delete(delWithVersion.apply(correctVersion, delete));
                    } else {
                        result = engine.delete(deleteWithCurrentTerm.apply(delete));
                    }
                    assertThat(result.isFound(), equalTo(docDeleted == false));
                    assertThat(result.getVersion(), equalTo(Math.max(lastOpVersion + 1, 1)));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.SUCCESS));
                    assertThat(result.getFailure(), nullValue());
                    docDeleted = true;
                    lastOpVersion = result.getVersion();
                    lastOpSeqNo = result.getSeqNo();
                    lastOpTerm = result.getTerm();
                    opsPerformed++;
                }
            }
            if (randomBoolean()) {
                // refresh and take the chance to check everything is ok so far
                assertVisibleCount(engine, docDeleted ? 0 : 1);
                // even if doc is not not deleted, lastFieldValue can still be null if this is the
                // first op and it failed.
                if (docDeleted == false && lastFieldValue != null) {
                    try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                        final TotalHitCountCollector collector = new TotalHitCountCollector();
                        searcher.search(new TermQuery(new Term("value", lastFieldValue)), collector);
                        assertThat(collector.getTotalHits(), equalTo(1));
                    }
                }
            }
            if (randomBoolean()) {
                engine.flush();
                engine.refresh("test");
            }

            if (rarely()) {
                // simulate GC deletes
                engine.refresh("gc_simulation", Engine.SearcherScope.INTERNAL, true);
                engine.clearDeletedTombstones();
                if (docDeleted) {
                    lastOpVersion = Versions.NOT_FOUND;
                    lastOpSeqNo = UNASSIGNED_SEQ_NO;
                    lastOpTerm = UNASSIGNED_PRIMARY_TERM;
                }
            }
        }

        assertVisibleCount(engine, docDeleted ? 0 : 1);
        if (docDeleted == false) {
            try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                final TotalHitCountCollector collector = new TotalHitCountCollector();
                searcher.search(new TermQuery(new Term("value", lastFieldValue)), collector);
                assertThat(collector.getTotalHits(), equalTo(1));
            }
        }
        return opsPerformed;
    }

    public void testNonInternalVersioningOnPrimary() throws IOException {
        final Set<VersionType> nonInternalVersioning = new HashSet<>(Arrays.asList(VersionType.values()));
        nonInternalVersioning.remove(VersionType.INTERNAL);
        final VersionType versionType = randomFrom(nonInternalVersioning);
        final List<Engine.Operation> ops = generateSingleDocHistory(false, versionType, 2,
            2, 20, "1");
        final Engine.Operation lastOp = ops.get(ops.size() - 1);
        final String lastFieldValue;
        if (lastOp instanceof Engine.Index) {
            Engine.Index index = (Engine.Index) lastOp;
            lastFieldValue = index.docs().get(0).get("value");
        } else {
            // delete
            lastFieldValue = null;
        }
        // other version types don't support out of order processing.
        if (versionType == VersionType.EXTERNAL) {
            shuffle(ops, random());
        }
        long highestOpVersion = Versions.NOT_FOUND;
        long seqNo = -1;
        boolean docDeleted = true;
        for (Engine.Operation op : ops) {
            logger.info("performing [{}], v [{}], seq# [{}], term [{}]",
                op.operationType().name().charAt(0), op.version(), op.seqNo(), op.primaryTerm());
            if (op instanceof Engine.Index) {
                final Engine.Index index = (Engine.Index) op;
                Engine.IndexResult result = engine.index(index);
                if (op.versionType().isVersionConflictForWrites(highestOpVersion, op.version(), docDeleted) == false) {
                    seqNo++;
                    assertThat(result.getSeqNo(), equalTo(seqNo));
                    assertThat(result.isCreated(), equalTo(docDeleted));
                    assertThat(result.getVersion(), equalTo(op.version()));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.SUCCESS));
                    assertThat(result.getFailure(), nullValue());
                    docDeleted = false;
                    highestOpVersion = op.version();
                } else {
                    assertThat(result.isCreated(), equalTo(false));
                    assertThat(result.getVersion(), equalTo(highestOpVersion));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.FAILURE));
                    assertThat(result.getFailure(), instanceOf(VersionConflictEngineException.class));
                    assertThat(result.getFailure().getStackTrace(), emptyArray());
                }
            } else {
                final Engine.Delete delete = (Engine.Delete) op;
                Engine.DeleteResult result = engine.delete(delete);
                if (op.versionType().isVersionConflictForWrites(highestOpVersion, op.version(), docDeleted) == false) {
                    seqNo++;
                    assertThat(result.getSeqNo(), equalTo(seqNo));
                    assertThat(result.isFound(), equalTo(docDeleted == false));
                    assertThat(result.getVersion(), equalTo(op.version()));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.SUCCESS));
                    assertThat(result.getFailure(), nullValue());
                    docDeleted = true;
                    highestOpVersion = op.version();
                } else {
                    assertThat(result.isFound(), equalTo(docDeleted == false));
                    assertThat(result.getVersion(), equalTo(highestOpVersion));
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.FAILURE));
                    assertThat(result.getFailure(), instanceOf(VersionConflictEngineException.class));
                    assertThat(result.getFailure().getStackTrace(), emptyArray());
                }
            }
            if (randomBoolean()) {
                engine.refresh("test");
            }
            if (randomBoolean()) {
                engine.flush();
                engine.refresh("test");
            }
        }

        assertVisibleCount(engine, docDeleted ? 0 : 1);
        if (docDeleted == false) {
            logger.info("searching for [{}]", lastFieldValue);
            try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                final TotalHitCountCollector collector = new TotalHitCountCollector();
                searcher.search(new TermQuery(new Term("value", lastFieldValue)), collector);
                assertThat(collector.getTotalHits(), equalTo(1));
            }
        }
    }

    public void testVersioningPromotedReplica() throws IOException {
        final List<Engine.Operation> replicaOps = generateSingleDocHistory(true, VersionType.INTERNAL, 1,
            2, 20, "1");
        List<Engine.Operation> primaryOps = generateSingleDocHistory(false, VersionType.INTERNAL, 2,
            2, 20, "1");
        Engine.Operation lastReplicaOp = replicaOps.get(replicaOps.size() - 1);
        final boolean deletedOnReplica = lastReplicaOp instanceof Engine.Delete;
        final long finalReplicaVersion = lastReplicaOp.version();
        final long finalReplicaSeqNo = lastReplicaOp.seqNo();
        assertOpsOnReplica(replicaOps, replicaEngine, true, logger);
        final int opsOnPrimary = assertOpsOnPrimary(primaryOps, finalReplicaVersion, deletedOnReplica, replicaEngine);
        final long currentSeqNo = getSequenceID(replicaEngine,
            new Engine.Get(false, false, "type", lastReplicaOp.uid().text(), lastReplicaOp.uid())).v1();
        try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
            final TotalHitCountCollector collector = new TotalHitCountCollector();
            searcher.search(new MatchAllDocsQuery(), collector);
            if (collector.getTotalHits() > 0) {
                // last op wasn't delete
                assertThat(currentSeqNo, equalTo(finalReplicaSeqNo + opsOnPrimary));
            }
        }
    }

    public void testConcurrentExternalVersioningOnPrimary() throws IOException, InterruptedException {
        final List<Engine.Operation> ops = generateSingleDocHistory(false, VersionType.EXTERNAL, 2,
            100, 300, "1");
        final Engine.Operation lastOp = ops.get(ops.size() - 1);
        final String lastFieldValue;
        if (lastOp instanceof Engine.Index) {
            Engine.Index index = (Engine.Index) lastOp;
            lastFieldValue = index.docs().get(0).get("value");
        } else {
            // delete
            lastFieldValue = null;
        }
        shuffle(ops, random());
        concurrentlyApplyOps(ops, engine);

        assertVisibleCount(engine, lastFieldValue == null ? 0 : 1);
        if (lastFieldValue != null) {
            try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                final TotalHitCountCollector collector = new TotalHitCountCollector();
                searcher.search(new TermQuery(new Term("value", lastFieldValue)), collector);
                assertThat(collector.getTotalHits(), equalTo(1));
            }
        }
    }

    public void testConcurrentGetAndSetOnPrimary() throws IOException, InterruptedException {
        Thread[] thread = new Thread[randomIntBetween(3, 5)];
        CountDownLatch startGun = new CountDownLatch(thread.length);
        final int opsPerThread = randomIntBetween(10, 20);
        class OpAndVersion {
            final long version;
            final String removed;
            final String added;

            OpAndVersion(long version, String removed, String added) {
                this.version = version;
                this.removed = removed;
                this.added = added;
            }
        }
        final AtomicInteger idGenerator = new AtomicInteger();
        final Queue<OpAndVersion> history = ConcurrentCollections.newQueue();
        ParsedDocument doc = testParsedDocument("1", null, testDocument(), bytesArray(""), null);
        final Term uidTerm = newUid(doc);
        engine.index(indexForDoc(doc));
        for (int i = 0; i < thread.length; i++) {
            thread[i] = new Thread(() -> {
                startGun.countDown();
                try {
                    startGun.await();
                } catch (InterruptedException e) {
                    throw new AssertionError(e);
                }
                final DocumentMapper mapper = docMapper(doc.type());
                for (int op = 0; op < opsPerThread; op++) {
                    try (Engine.GetResult get =
                             engine.get(new Engine.Get(true, false, doc.type(), doc.id(), uidTerm), mapper, randomSearcherWrapper())) {
                        FieldsVisitor visitor = new FieldsVisitor(true);
                        get.docIdAndVersion().reader.document(get.docIdAndVersion().docId, visitor);
                        List<String> values = new ArrayList<>(Strings.commaDelimitedListToSet(visitor.source().utf8ToString()));
                        String removed = op % 3 == 0 && values.size() > 0 ? values.remove(0) : null;
                        String added = "v_" + idGenerator.incrementAndGet();
                        values.add(added);
                        Engine.Index index = new Engine.Index(uidTerm,
                            testParsedDocument("1", null, testDocument(),
                                bytesArray(Strings.collectionToCommaDelimitedString(values)), null),
                            UNASSIGNED_SEQ_NO, 2,
                            get.version(), VersionType.INTERNAL,
                            PRIMARY, System.currentTimeMillis(), -1, false, UNASSIGNED_SEQ_NO, 0);
                        Engine.IndexResult indexResult = engine.index(index);
                        if (indexResult.getResultType() == Engine.Result.Type.SUCCESS) {
                            history.add(new OpAndVersion(indexResult.getVersion(), removed, added));
                        }

                    } catch (IOException e) {
                        throw new AssertionError(e);
                    }
                }
            });
            thread[i].start();
        }
        for (int i = 0; i < thread.length; i++) {
            thread[i].join();
        }
        List<OpAndVersion> sortedHistory = new ArrayList<>(history);
        sortedHistory.sort(Comparator.comparing(o -> o.version));
        Set<String> currentValues = new HashSet<>();
        for (int i = 0; i < sortedHistory.size(); i++) {
            OpAndVersion op = sortedHistory.get(i);
            if (i > 0) {
                assertThat("duplicate version", op.version, not(equalTo(sortedHistory.get(i - 1).version)));
            }
            boolean exists = op.removed == null ? true : currentValues.remove(op.removed);
            assertTrue(op.removed + " should exist", exists);
            exists = currentValues.add(op.added);
            assertTrue(op.added + " should not exist", exists);
        }

        try (Engine.GetResult get =
                 engine.get(new Engine.Get(true, false, doc.type(), doc.id(), uidTerm), docMapper(doc.type()), randomSearcherWrapper())) {
            FieldsVisitor visitor = new FieldsVisitor(true);
            get.docIdAndVersion().reader.document(get.docIdAndVersion().docId, visitor);
            List<String> values = Arrays.asList(Strings.commaDelimitedListToStringArray(visitor.source().utf8ToString()));
            assertThat(currentValues, equalTo(new HashSet<>(values)));
        }
    }

    public void testBasicCreatedFlag() throws IOException {
        ParsedDocument doc = testParsedDocument("1", null, testDocument(), B_1, null);
        Engine.Index index = indexForDoc(doc);
        Engine.IndexResult indexResult = engine.index(index);
        assertTrue(indexResult.isCreated());

        index = indexForDoc(doc);
        indexResult = engine.index(index);
        assertFalse(indexResult.isCreated());

        engine.delete(new Engine.Delete("doc", "1", newUid(doc), primaryTerm.get()));

        index = indexForDoc(doc);
        indexResult = engine.index(index);
        assertTrue(indexResult.isCreated());
    }

    private static class MockAppender extends AbstractAppender {
        public boolean sawIndexWriterMessage;

        public boolean sawIndexWriterIFDMessage;

        MockAppender(final String name) throws IllegalAccessException {
            super(name, RegexFilter.createFilter(".*(\n.*)*", new String[0],
                false, null, null), null);
        }

        @Override
        public void append(LogEvent event) {
            final String formattedMessage = event.getMessage().getFormattedMessage();
            if (event.getLevel() == Level.TRACE && event.getMarker().getName().contains("[index][0]")) {
                if (event.getLoggerName().endsWith(".IW") &&
                    formattedMessage.contains("IW: now apply all deletes")) {
                    sawIndexWriterMessage = true;
                }
                if (event.getLoggerName().endsWith(".IFD")) {
                    sawIndexWriterIFDMessage = true;
                }
            }
        }
    }

    // #5891: make sure IndexWriter's infoStream output is
    // sent to lucene.iw with log level TRACE:

    public void testIndexWriterInfoStream() throws IllegalAccessException, IOException {
        assumeFalse("who tests the tester?", VERBOSE);
        MockAppender mockAppender = new MockAppender("testIndexWriterInfoStream");
        mockAppender.start();

        Logger rootLogger = LogManager.getRootLogger();
        Level savedLevel = rootLogger.getLevel();
        Loggers.addAppender(rootLogger, mockAppender);
        Loggers.setLevel(rootLogger, Level.DEBUG);
        rootLogger = LogManager.getRootLogger();

        try {
            // First, with DEBUG, which should NOT log IndexWriter output:
            ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            engine.index(indexForDoc(doc));
            engine.flush();
            assertFalse(mockAppender.sawIndexWriterMessage);

            // Again, with TRACE, which should log IndexWriter output:
            Loggers.setLevel(rootLogger, Level.TRACE);
            engine.index(indexForDoc(doc));
            engine.flush();
            assertTrue(mockAppender.sawIndexWriterMessage);
            engine.close();
        } finally {
            Loggers.removeAppender(rootLogger, mockAppender);
            mockAppender.stop();
            Loggers.setLevel(rootLogger, savedLevel);
        }
    }

    public void testSeqNoAndCheckpoints() throws IOException, InterruptedException {
        final int opCount = randomIntBetween(1, 256);
        long primarySeqNo = SequenceNumbers.NO_OPS_PERFORMED;
        final String[] ids = new String[]{"1", "2", "3"};
        final Set<String> indexedIds = new HashSet<>();
        long localCheckpoint = SequenceNumbers.NO_OPS_PERFORMED;
        long replicaLocalCheckpoint = SequenceNumbers.NO_OPS_PERFORMED;
        final long globalCheckpoint;
        long maxSeqNo = SequenceNumbers.NO_OPS_PERFORMED;
        IOUtils.close(store, engine);
        store = createStore();
        InternalEngine initialEngine = null;

        try {
            initialEngine = createEngine(defaultSettings, store, createTempDir(), newLogMergePolicy(), null);
            final ShardRouting primary = TestShardRouting.newShardRouting("test",
                shardId.id(), "node1", null, true,
                ShardRoutingState.STARTED, allocationId);
            final ShardRouting initializingReplica =
                TestShardRouting.newShardRouting(shardId, "node2", false, ShardRoutingState.INITIALIZING);

            ReplicationTracker gcpTracker = (ReplicationTracker) initialEngine.config().getGlobalCheckpointSupplier();
            gcpTracker.updateFromMaster(1L, new HashSet<>(Collections.singletonList(primary.allocationId().getId())),
                new IndexShardRoutingTable.Builder(shardId).addShard(primary).build());
            gcpTracker.activatePrimaryMode(primarySeqNo);
            if (defaultSettings.isSoftDeleteEnabled()) {
                final CountDownLatch countDownLatch = new CountDownLatch(1);
                gcpTracker.addPeerRecoveryRetentionLease(initializingReplica.currentNodeId(),
                    SequenceNumbers.NO_OPS_PERFORMED, ActionListener.wrap(countDownLatch::countDown));
                countDownLatch.await();
            }
            gcpTracker.updateFromMaster(2L, new HashSet<>(Collections.singletonList(primary.allocationId().getId())),
                new IndexShardRoutingTable.Builder(shardId).addShard(primary).addShard(initializingReplica).build());
            gcpTracker.initiateTracking(initializingReplica.allocationId().getId());
            gcpTracker.markAllocationIdAsInSync(initializingReplica.allocationId().getId(), replicaLocalCheckpoint);
            final ShardRouting replica = initializingReplica.moveToStarted();
            gcpTracker.updateFromMaster(3L, new HashSet<>(Arrays.asList(primary.allocationId().getId(), replica.allocationId().getId())),
                new IndexShardRoutingTable.Builder(shardId).addShard(primary).addShard(replica).build());

            for (int op = 0; op < opCount; op++) {
                final String id;
                // mostly index, sometimes delete
                if (rarely() && indexedIds.isEmpty() == false) {
                    // we have some docs indexed, so delete one of them
                    id = randomFrom(indexedIds);
                    final Engine.Delete delete = new Engine.Delete(
                        "test", id, newUid(id), UNASSIGNED_SEQ_NO, primaryTerm.get(),
                        rarely() ? 100 : Versions.MATCH_ANY, VersionType.INTERNAL, PRIMARY, System.nanoTime(), UNASSIGNED_SEQ_NO, 0);
                    final Engine.DeleteResult result = initialEngine.delete(delete);
                    if (result.getResultType() == Engine.Result.Type.SUCCESS) {
                        assertThat(result.getSeqNo(), equalTo(primarySeqNo + 1));
                        assertThat(initialEngine.getSeqNoStats(-1).getMaxSeqNo(), equalTo(primarySeqNo + 1));
                        indexedIds.remove(id);
                        primarySeqNo++;
                    } else {
                        assertThat(result.getSeqNo(), equalTo(UNASSIGNED_SEQ_NO));
                        assertThat(initialEngine.getSeqNoStats(-1).getMaxSeqNo(), equalTo(primarySeqNo));
                    }
                } else {
                    // index a document
                    id = randomFrom(ids);
                    ParsedDocument doc = testParsedDocument(id, null, testDocumentWithTextField(), SOURCE, null);
                    final Engine.Index index = new Engine.Index(newUid(doc), doc,
                        UNASSIGNED_SEQ_NO, primaryTerm.get(),
                        rarely() ? 100 : Versions.MATCH_ANY, VersionType.INTERNAL,
                        PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
                    final Engine.IndexResult result = initialEngine.index(index);
                    if (result.getResultType() == Engine.Result.Type.SUCCESS) {
                        assertThat(result.getSeqNo(), equalTo(primarySeqNo + 1));
                        assertThat(initialEngine.getSeqNoStats(-1).getMaxSeqNo(), equalTo(primarySeqNo + 1));
                        indexedIds.add(id);
                        primarySeqNo++;
                    } else {
                        assertThat(result.getSeqNo(), equalTo(UNASSIGNED_SEQ_NO));
                        assertThat(initialEngine.getSeqNoStats(-1).getMaxSeqNo(), equalTo(primarySeqNo));
                    }
                }

                initialEngine.syncTranslog(); // to advance persisted local checkpoint

                if (randomInt(10) < 3) {
                    // only update rarely as we do it every doc
                    replicaLocalCheckpoint = randomIntBetween(Math.toIntExact(replicaLocalCheckpoint), Math.toIntExact(primarySeqNo));
                }
                gcpTracker.updateLocalCheckpoint(primary.allocationId().getId(),
                    initialEngine.getPersistedLocalCheckpoint());
                gcpTracker.updateLocalCheckpoint(replica.allocationId().getId(), replicaLocalCheckpoint);

                if (rarely()) {
                    localCheckpoint = primarySeqNo;
                    maxSeqNo = primarySeqNo;
                    initialEngine.flush(true, true);
                }
            }

            logger.info("localcheckpoint {}, global {}", replicaLocalCheckpoint, primarySeqNo);
            globalCheckpoint = gcpTracker.getGlobalCheckpoint();

            assertEquals(primarySeqNo, initialEngine.getSeqNoStats(-1).getMaxSeqNo());
            assertEquals(primarySeqNo, initialEngine.getPersistedLocalCheckpoint());
            assertThat(globalCheckpoint, equalTo(replicaLocalCheckpoint));

            assertThat(
                Long.parseLong(initialEngine.commitStats().getUserData().get(SequenceNumbers.LOCAL_CHECKPOINT_KEY)),
                equalTo(localCheckpoint));
            initialEngine.getTranslog().sync(); // to guarantee the global checkpoint is written to the translog checkpoint
            assertThat(
                initialEngine.getTranslog().getLastSyncedGlobalCheckpoint(),
                equalTo(globalCheckpoint));
            assertThat(
                Long.parseLong(initialEngine.commitStats().getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                equalTo(maxSeqNo));

        } finally {
            IOUtils.close(initialEngine);
        }

        try (InternalEngine recoveringEngine = new InternalEngine(initialEngine.config())) {
            recoveringEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);

            assertEquals(primarySeqNo, recoveringEngine.getSeqNoStats(-1).getMaxSeqNo());
            assertThat(
                Long.parseLong(recoveringEngine.commitStats().getUserData().get(SequenceNumbers.LOCAL_CHECKPOINT_KEY)),
                equalTo(primarySeqNo));
            assertThat(
                recoveringEngine.getTranslog().getLastSyncedGlobalCheckpoint(),
                equalTo(globalCheckpoint));
            assertThat(
                Long.parseLong(recoveringEngine.commitStats().getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                // after recovering from translog, all docs have been flushed to Lucene segments, so here we will assert
                // that the committed max seq no is equivalent to what the current primary seq no is, as all data
                // we have assigned sequence numbers to should be in the commit
                equalTo(primarySeqNo));
            assertThat(recoveringEngine.getProcessedLocalCheckpoint(), equalTo(primarySeqNo));
            assertThat(recoveringEngine.getPersistedLocalCheckpoint(), equalTo(primarySeqNo));
            assertThat(recoveringEngine.getSeqNoStats(-1).getMaxSeqNo(), equalTo(primarySeqNo));
            assertThat(generateNewSeqNo(recoveringEngine), equalTo(primarySeqNo + 1));
        }
    }

    // this test writes documents to the engine while concurrently flushing/commit
    // and ensuring that the commit points contain the correct sequence number data
    public void testConcurrentWritesAndCommits() throws Exception {
        List<Engine.IndexCommitRef> commits = new ArrayList<>();
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(defaultSettings, store, createTempDir(), newMergePolicy(), null))) {
            final int numIndexingThreads = scaledRandomIntBetween(2, 4);
            final int numDocsPerThread = randomIntBetween(500, 1000);
            final CyclicBarrier barrier = new CyclicBarrier(numIndexingThreads + 1);
            final List<Thread> indexingThreads = new ArrayList<>();
            final CountDownLatch doneLatch = new CountDownLatch(numIndexingThreads);
            // create N indexing threads to index documents simultaneously
            for (int threadNum = 0; threadNum < numIndexingThreads; threadNum++) {
                final int threadIdx = threadNum;
                Thread indexingThread = new Thread(() -> {
                    try {
                        barrier.await(); // wait for all threads to start at the same time
                        // index random number of docs
                        for (int i = 0; i < numDocsPerThread; i++) {
                            final String id = "thread" + threadIdx + "#" + i;
                            ParsedDocument doc = testParsedDocument(id, null, testDocument(), B_1, null);
                            engine.index(indexForDoc(doc));
                        }
                    } catch (Exception e) {
                        throw new RuntimeException(e);
                    } finally {
                        doneLatch.countDown();
                    }

                });
                indexingThreads.add(indexingThread);
            }

            // start the indexing threads
            for (Thread thread : indexingThreads) {
                thread.start();
            }
            barrier.await(); // wait for indexing threads to all be ready to start
            int commitLimit = randomIntBetween(10, 20);
            long sleepTime = 1;
            // create random commit points
            boolean doneIndexing;
            do {
                doneIndexing = doneLatch.await(sleepTime, TimeUnit.MILLISECONDS);
                commits.add(engine.acquireLastIndexCommit(true));
                if (commits.size() > commitLimit) { // don't keep on piling up too many commits
                    IOUtils.close(commits.remove(randomIntBetween(0, commits.size()-1)));
                    // we increase the wait time to make sure we eventually if things are slow wait for threads to finish.
                    // this will reduce pressure on disks and will allow threads to make progress without piling up too many commits
                    sleepTime = sleepTime * 2;
                }
            } while (doneIndexing == false);

            // now, verify all the commits have the correct docs according to the user commit data
            long prevLocalCheckpoint = SequenceNumbers.NO_OPS_PERFORMED;
            long prevMaxSeqNo = SequenceNumbers.NO_OPS_PERFORMED;
            for (Engine.IndexCommitRef commitRef : commits) {
                final IndexCommit commit = commitRef.getIndexCommit();
                Map<String, String> userData = commit.getUserData();
                long localCheckpoint = userData.containsKey(SequenceNumbers.LOCAL_CHECKPOINT_KEY) ?
                    Long.parseLong(userData.get(SequenceNumbers.LOCAL_CHECKPOINT_KEY)) :
                    SequenceNumbers.NO_OPS_PERFORMED;
                long maxSeqNo = userData.containsKey(SequenceNumbers.MAX_SEQ_NO) ?
                    Long.parseLong(userData.get(SequenceNumbers.MAX_SEQ_NO)) :
                    UNASSIGNED_SEQ_NO;
                // local checkpoint and max seq no shouldn't go backwards
                assertThat(localCheckpoint, greaterThanOrEqualTo(prevLocalCheckpoint));
                assertThat(maxSeqNo, greaterThanOrEqualTo(prevMaxSeqNo));
                try (IndexReader reader = DirectoryReader.open(commit)) {
                    Long highest = getHighestSeqNo(reader);
                    final long highestSeqNo;
                    if (highest != null) {
                        highestSeqNo = highest.longValue();
                    } else {
                        highestSeqNo = SequenceNumbers.NO_OPS_PERFORMED;
                    }
                    // make sure localCheckpoint <= highest seq no found <= maxSeqNo
                    assertThat(highestSeqNo, greaterThanOrEqualTo(localCheckpoint));
                    assertThat(highestSeqNo, lessThanOrEqualTo(maxSeqNo));
                    // make sure all sequence numbers up to and including the local checkpoint are in the index
                    FixedBitSet seqNosBitSet = getSeqNosSet(reader, highestSeqNo);
                    for (int i = 0; i <= localCheckpoint; i++) {
                        assertTrue("local checkpoint [" + localCheckpoint + "], _seq_no [" + i + "] should be indexed",
                            seqNosBitSet.get(i));
                    }
                }
                prevLocalCheckpoint = localCheckpoint;
                prevMaxSeqNo = maxSeqNo;
            }
            IOUtils.close(commits);
        }
    }

    private static Long getHighestSeqNo(final IndexReader reader) throws IOException {
        final String fieldName = SeqNoFieldMapper.NAME;
        long size = PointValues.size(reader, fieldName);
        if (size == 0) {
            return null;
        }
        byte[] max = PointValues.getMaxPackedValue(reader, fieldName);
        return LongPoint.decodeDimension(max, 0);
    }

    private static FixedBitSet getSeqNosSet(final IndexReader reader, final long highestSeqNo) throws IOException {
        // _seq_no are stored as doc values for the time being, so this is how we get them
        // (as opposed to using an IndexSearcher or IndexReader)
        final FixedBitSet bitSet = new FixedBitSet((int) highestSeqNo + 1);
        final List<LeafReaderContext> leaves = reader.leaves();
        if (leaves.isEmpty()) {
            return bitSet;
        }

        for (int i = 0; i < leaves.size(); i++) {
            final LeafReader leaf = leaves.get(i).reader();
            final NumericDocValues values = leaf.getNumericDocValues(SeqNoFieldMapper.NAME);
            if (values == null) {
                continue;
            }
            final Bits bits = leaf.getLiveDocs();
            for (int docID = 0; docID < leaf.maxDoc(); docID++) {
                if (bits == null || bits.get(docID)) {
                    if (values.advanceExact(docID) == false) {
                        throw new AssertionError("Document does not have a seq number: " + docID);
                    }
                    final long seqNo = values.longValue();
                    assertFalse("should not have more than one document with the same seq_no[" +
                        seqNo + "]", bitSet.get((int) seqNo));
                    bitSet.set((int) seqNo);
                }
            }
        }
        return bitSet;
    }

    // #8603: make sure we can separately log IFD's messages
    public void testIndexWriterIFDInfoStream() throws IllegalAccessException, IOException {
        assumeFalse("who tests the tester?", VERBOSE);
        MockAppender mockAppender = new MockAppender("testIndexWriterIFDInfoStream");
        mockAppender.start();

        final Logger iwIFDLogger = LogManager.getLogger("org.elasticsearch.index.engine.Engine.IFD");

        Loggers.addAppender(iwIFDLogger, mockAppender);
        Loggers.setLevel(iwIFDLogger, Level.DEBUG);

        try {
            // First, with DEBUG, which should NOT log IndexWriter output:
            ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            engine.index(indexForDoc(doc));
            engine.flush();
            assertFalse(mockAppender.sawIndexWriterMessage);
            assertFalse(mockAppender.sawIndexWriterIFDMessage);

            // Again, with TRACE, which should only log IndexWriter IFD output:
            Loggers.setLevel(iwIFDLogger, Level.TRACE);
            engine.index(indexForDoc(doc));
            engine.flush();
            assertFalse(mockAppender.sawIndexWriterMessage);
            assertTrue(mockAppender.sawIndexWriterIFDMessage);

        } finally {
            Loggers.removeAppender(iwIFDLogger, mockAppender);
            mockAppender.stop();
            Loggers.setLevel(iwIFDLogger, (Level) null);
        }
    }

    public void testEnableGcDeletes() throws Exception {
        try (Store store = createStore();
             Engine engine = createEngine(config(defaultSettings, store, createTempDir(), newMergePolicy(), null))) {
            engine.config().setEnableGcDeletes(false);

            // Add document
            Document document = testDocument();
            document.add(new TextField("value", "test1", Field.Store.YES));

            ParsedDocument doc = testParsedDocument("1", null, document, B_2, null);
            engine.index(new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 0, 1,
                VersionType.EXTERNAL,
                Engine.Operation.Origin.PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0));

            // Delete document we just added:
            engine.delete(new Engine.Delete("test", "1", newUid(doc), UNASSIGNED_SEQ_NO, 0,
                10, VersionType.EXTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(), UNASSIGNED_SEQ_NO, 0));

            // Get should not find the document
            Engine.GetResult getResult = engine.get(newGet(true, doc), docMapper(doc.type()), randomSearcherWrapper());
            assertThat(getResult.exists(), equalTo(false));

            // Give the gc pruning logic a chance to kick in
            Thread.sleep(1000);

            if (randomBoolean()) {
                engine.refresh("test");
            }

            // Delete non-existent document
            engine.delete(new Engine.Delete("test", "2", newUid("2"), UNASSIGNED_SEQ_NO, 0,
                10, VersionType.EXTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(), UNASSIGNED_SEQ_NO, 0));

            // Get should not find the document (we never indexed uid=2):
            getResult = engine.get(new Engine.Get(true, false, "type", "2", newUid("2")), docMapper("type"), randomSearcherWrapper());
            assertThat(getResult.exists(), equalTo(false));

            // Try to index uid=1 with a too-old version, should fail:
            Engine.Index index = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 0, 2,
                VersionType.EXTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
            Engine.IndexResult indexResult = engine.index(index);
            assertThat(indexResult.getResultType(), equalTo(Engine.Result.Type.FAILURE));
            assertThat(indexResult.getFailure(), instanceOf(VersionConflictEngineException.class));

            // Get should still not find the document
            getResult = engine.get(newGet(true, doc), docMapper(doc.type()), randomSearcherWrapper());
            assertThat(getResult.exists(), equalTo(false));

            // Try to index uid=2 with a too-old version, should fail:
            Engine.Index index1 = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 0, 2,
                VersionType.EXTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
            indexResult = engine.index(index1);
            assertThat(indexResult.getResultType(), equalTo(Engine.Result.Type.FAILURE));
            assertThat(indexResult.getFailure(), instanceOf(VersionConflictEngineException.class));

            // Get should not find the document
            getResult = engine.get(newGet(true, doc), docMapper(doc.type()), randomSearcherWrapper());
            assertThat(getResult.exists(), equalTo(false));
        }
    }

    public void testExtractShardId() {
        try (Engine.Searcher test = this.engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
            ShardId shardId = ShardUtils.extractShardId(test.getDirectoryReader());
            assertNotNull(shardId);
            assertEquals(shardId, engine.config().getShardId());
        }
    }

    /**
     * Random test that throws random exception and ensures all references are
     * counted down / released and resources are closed.
     */
    public void testFailStart() throws IOException {
        // this test fails if any reader, searcher or directory is not closed - MDW FTW
        final int iters = scaledRandomIntBetween(10, 100);
        for (int i = 0; i < iters; i++) {
            MockDirectoryWrapper wrapper = newMockDirectory();
            wrapper.setFailOnOpenInput(randomBoolean());
            wrapper.setAllowRandomFileNotFoundException(randomBoolean());
            wrapper.setRandomIOExceptionRate(randomDouble());
            wrapper.setRandomIOExceptionRateOnOpen(randomDouble());
            final Path translogPath = createTempDir("testFailStart");
            try (Store store = createStore(wrapper)) {
                int refCount = store.refCount();
                assertTrue("refCount: " + store.refCount(), store.refCount() > 0);
                InternalEngine holder;
                try {
                    holder = createEngine(store, translogPath);
                } catch (EngineCreationFailureException | IOException ex) {
                    assertEquals(store.refCount(), refCount);
                    continue;
                }
                assertEquals(store.refCount(), refCount + 1);
                final int numStarts = scaledRandomIntBetween(1, 5);
                for (int j = 0; j < numStarts; j++) {
                    try {
                        assertEquals(store.refCount(), refCount + 1);
                        holder.close();
                        holder = createEngine(store, translogPath);
                        assertEquals(store.refCount(), refCount + 1);
                    } catch (EngineCreationFailureException ex) {
                        // all is fine
                        assertEquals(store.refCount(), refCount);
                        break;
                    }
                }
                holder.close();
                assertEquals(store.refCount(), refCount);
            }
        }
    }

    public void testSettings() {
        CodecService codecService = new CodecService(null, logger);
        LiveIndexWriterConfig currentIndexWriterConfig = engine.getCurrentIndexWriterConfig();

        assertEquals(engine.config().getCodec().getName(), codecService.codec(codecName).getName());
        assertEquals(currentIndexWriterConfig.getCodec().getName(), codecService.codec(codecName).getName());
    }

    public void testCurrentTranslogUUIIDIsCommitted() throws IOException {
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        try (Store store = createStore()) {
            EngineConfig config = config(defaultSettings, store, createTempDir(), newMergePolicy(), null, null,
                globalCheckpoint::get);

            // create
            {
                store.createEmpty();
                final String translogUUID =
                    Translog.createEmptyTranslog(config.getTranslogConfig().getTranslogPath(),
                        SequenceNumbers.NO_OPS_PERFORMED, shardId, primaryTerm.get());
                store.associateIndexWithNewTranslog(translogUUID);
                ParsedDocument doc = testParsedDocument(Integer.toString(0), null, testDocument(),
                    new BytesArray("{}"), null);
                Engine.Index firstIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 0,
                    Versions.MATCH_DELETED, VersionType.INTERNAL, PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);

                try (InternalEngine engine = createEngine(config)) {
                    engine.index(firstIndexRequest);
                    engine.syncTranslog(); // to advance persisted local checkpoint
                    assertEquals(engine.getProcessedLocalCheckpoint(), engine.getPersistedLocalCheckpoint());
                    globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
                    expectThrows(IllegalStateException.class, () -> engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE));
                    Map<String, String> userData = engine.getLastCommittedSegmentInfos().getUserData();
                    assertEquals(engine.getTranslog().getTranslogUUID(), userData.get(Translog.TRANSLOG_UUID_KEY));
                }
            }
            // open and recover tlog
            {
                for (int i = 0; i < 2; i++) {
                    try (InternalEngine engine = new InternalEngine(config)) {
                        expectThrows(IllegalStateException.class, engine::ensureCanFlush);
                        Map<String, String> userData = engine.getLastCommittedSegmentInfos().getUserData();
                        assertEquals(engine.getTranslog().getTranslogUUID(), userData.get(Translog.TRANSLOG_UUID_KEY));
                        engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                        userData = engine.getLastCommittedSegmentInfos().getUserData();
                        assertEquals(engine.getTranslog().getTranslogUUID(), userData.get(Translog.TRANSLOG_UUID_KEY));
                    }
                }
            }
            // open index with new tlog
            {
                final String translogUUID =
                    Translog.createEmptyTranslog(config.getTranslogConfig().getTranslogPath(),
                        SequenceNumbers.NO_OPS_PERFORMED, shardId, primaryTerm.get());
                store.associateIndexWithNewTranslog(translogUUID);
                try (InternalEngine engine = new InternalEngine(config)) {
                    Map<String, String> userData = engine.getLastCommittedSegmentInfos().getUserData();
                    assertEquals(engine.getTranslog().getTranslogUUID(), userData.get(Translog.TRANSLOG_UUID_KEY));
                    engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                    assertEquals(2, engine.getTranslog().currentFileGeneration());
                    assertEquals(0L, engine.getTranslog().stats().getUncommittedOperations());
                }
            }

            // open and recover tlog with empty tlog
            {
                for (int i = 0; i < 2; i++) {
                    try (InternalEngine engine = new InternalEngine(config)) {
                        Map<String, String> userData = engine.getLastCommittedSegmentInfos().getUserData();
                        assertEquals(engine.getTranslog().getTranslogUUID(), userData.get(Translog.TRANSLOG_UUID_KEY));
                        engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                        userData = engine.getLastCommittedSegmentInfos().getUserData();
                        assertEquals(engine.getTranslog().getTranslogUUID(), userData.get(Translog.TRANSLOG_UUID_KEY));
                    }
                }
            }
        }
    }

    public void testMissingTranslog() throws IOException {
        // test that we can force start the engine , even if the translog is missing.
        engine.close();
        // fake a new translog, causing the engine to point to a missing one.
        final long newPrimaryTerm = randomLongBetween(0L, primaryTerm.get());
        final Translog translog = createTranslog(() -> newPrimaryTerm);
        long id = translog.currentFileGeneration();
        translog.close();
        IOUtils.rm(translog.location().resolve(Translog.getFilename(id)));
        expectThrows(EngineCreationFailureException.class, "engine shouldn't start without a valid translog id",
            () -> createEngine(store, primaryTranslogDir));
        // when a new translog is created it should be ok
        final String translogUUID = Translog.createEmptyTranslog(primaryTranslogDir, UNASSIGNED_SEQ_NO, shardId, newPrimaryTerm);
        store.associateIndexWithNewTranslog(translogUUID);
        EngineConfig config = config(defaultSettings, store, primaryTranslogDir, newMergePolicy(), null);
        engine = new InternalEngine(config);
    }

    public void testTranslogReplayWithFailure() throws IOException {
        final MockDirectoryWrapper directory = newMockDirectory();
        final Path translogPath = createTempDir("testTranslogReplayWithFailure");
        try (Store store = createStore(directory)) {
            final int numDocs = randomIntBetween(1, 10);
            try (InternalEngine engine = createEngine(store, translogPath)) {
                for (int i = 0; i < numDocs; i++) {
                    ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), new BytesArray("{}"), null);
                    Engine.Index firstIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 0,
                        Versions.MATCH_DELETED, VersionType.INTERNAL, PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
                    Engine.IndexResult indexResult = engine.index(firstIndexRequest);
                    assertThat(indexResult.getVersion(), equalTo(1L));
                }
                assertVisibleCount(engine, numDocs);
            }
            // since we rollback the IW we are writing the same segment files again after starting IW but MDW prevents
            // this so we have to disable the check explicitly
            final int numIters = randomIntBetween(3, 5);
            for (int i = 0; i < numIters; i++) {
                directory.setRandomIOExceptionRateOnOpen(randomDouble());
                directory.setRandomIOExceptionRate(randomDouble());
                directory.setFailOnOpenInput(randomBoolean());
                directory.setAllowRandomFileNotFoundException(randomBoolean());
                boolean started = false;
                InternalEngine engine = null;
                try {
                    engine = createEngine(store, translogPath);
                    started = true;
                } catch (EngineException | IOException e) {
                    logger.trace("exception on open", e);
                }
                directory.setRandomIOExceptionRateOnOpen(0.0);
                directory.setRandomIOExceptionRate(0.0);
                directory.setFailOnOpenInput(false);
                directory.setAllowRandomFileNotFoundException(false);
                if (started) {
                    engine.refresh("warm_up");
                    assertVisibleCount(engine, numDocs, false);
                    engine.close();
                }
            }
        }
    }

    public void testTranslogCleanUpPostCommitCrash() throws Exception {
        IndexSettings indexSettings = new IndexSettings(defaultSettings.getIndexMetadata(), defaultSettings.getNodeSettings(),
            defaultSettings.getScopedSettings());
        IndexMetadata.Builder builder = IndexMetadata.builder(indexSettings.getIndexMetadata());
        builder.settings(Settings.builder().put(indexSettings.getSettings())
            .put(IndexSettings.INDEX_TRANSLOG_RETENTION_AGE_SETTING.getKey(), "-1")
            .put(IndexSettings.INDEX_TRANSLOG_RETENTION_SIZE_SETTING.getKey(), "-1")
        );
        indexSettings.updateIndexMetadata(builder.build());

        try (Store store = createStore()) {
            AtomicBoolean throwErrorOnCommit = new AtomicBoolean();
            final Path translogPath = createTempDir();
            final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
            final LongSupplier globalCheckpointSupplier = () -> globalCheckpoint.get();
            store.createEmpty();
            final String translogUUID = Translog.createEmptyTranslog(translogPath, globalCheckpoint.get(), shardId, primaryTerm.get());
            store.associateIndexWithNewTranslog(translogUUID);
            try (InternalEngine engine =
                     new InternalEngine(config(indexSettings, store, translogPath, newMergePolicy(), null, null,
                         globalCheckpointSupplier)) {

                @Override
                protected void commitIndexWriter(IndexWriter writer, Translog translog, String syncId) throws IOException {
                    super.commitIndexWriter(writer, translog, syncId);
                    if (throwErrorOnCommit.get()) {
                        throw new RuntimeException("power's out");
                    }
                }
            }) {
                engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                final ParsedDocument doc1 = testParsedDocument("1", null,
                    testDocumentWithTextField(), SOURCE, null);
                engine.index(indexForDoc(doc1));
                engine.syncTranslog(); // to advance local checkpoint
                assertEquals(engine.getProcessedLocalCheckpoint(), engine.getPersistedLocalCheckpoint());
                globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
                throwErrorOnCommit.set(true);
                FlushFailedEngineException e = expectThrows(FlushFailedEngineException.class, engine::flush);
                assertThat(e.getCause().getMessage(), equalTo("power's out"));
            }
            try (InternalEngine engine =
                     new InternalEngine(config(indexSettings, store, translogPath, newMergePolicy(), null, null,
                         globalCheckpointSupplier))) {
                engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                assertVisibleCount(engine, 1);
                final long localCheckpoint = Long.parseLong(
                    engine.getLastCommittedSegmentInfos().userData.get(SequenceNumbers.LOCAL_CHECKPOINT_KEY));
                final long committedGen = engine.getTranslog().getMinGenerationForSeqNo(localCheckpoint + 1).translogFileGeneration;
                for (int gen = 1; gen < committedGen; gen++) {
                    final Path genFile = translogPath.resolve(Translog.getFilename(gen));
                    assertFalse(genFile + " wasn't cleaned up", Files.exists(genFile));
                }
            }
        }
    }

    public void testSkipTranslogReplay() throws IOException {
        final int numDocs = randomIntBetween(1, 10);
        for (int i = 0; i < numDocs; i++) {
            ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), new BytesArray("{}"), null);
            Engine.Index firstIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 0,
                Versions.MATCH_DELETED, VersionType.INTERNAL, PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
            Engine.IndexResult indexResult = engine.index(firstIndexRequest);
            assertThat(indexResult.getVersion(), equalTo(1L));
        }
        EngineConfig config = engine.config();
        assertVisibleCount(engine, numDocs);
        engine.close();
        try (InternalEngine engine = new InternalEngine(config)) {
            engine.skipTranslogRecovery();
            try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), randomIntBetween(numDocs, numDocs + 10));
                assertThat(topDocs.totalHits.value, equalTo(0L));
            }
        }
    }

    private Mapping dynamicUpdate() {
        final RootObjectMapper root = new RootObjectMapper.Builder("some_type", Version.CURRENT).build(new ContentPath());
        return new Mapping(root, new MetadataFieldMapper[0], emptyMap());
    }

    private Path[] filterExtraFSFiles(Path[] files) {
        List<Path> paths = new ArrayList<>();
        for (Path p : files) {
            if (p.getFileName().toString().startsWith("extra")) {
                continue;
            }
            paths.add(p);
        }
        return paths.toArray(new Path[0]);
    }

    public void testTranslogReplay() throws IOException {
        final LongSupplier inSyncGlobalCheckpointSupplier = () -> this.engine.getProcessedLocalCheckpoint();
        final int numDocs = randomIntBetween(1, 10);
        for (int i = 0; i < numDocs; i++) {
            ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), new BytesArray("{}"), null);
            Engine.Index firstIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1,
                Versions.MATCH_DELETED, VersionType.INTERNAL, PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
            Engine.IndexResult indexResult = engine.index(firstIndexRequest);
            assertThat(indexResult.getVersion(), equalTo(1L));
        }
        assertVisibleCount(engine, numDocs);
        translogHandler = createTranslogHandler(engine.engineConfig.getIndexSettings());
        translogHandler.mappingUpdate = dynamicUpdate();

        engine.close();
        // we need to reuse the engine config unless the parser.mappingModified won't work
        engine = new InternalEngine(copy(engine.config(), inSyncGlobalCheckpointSupplier));
        engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
        engine.refresh("warm_up");

        assertVisibleCount(engine, numDocs, false);
        assertEquals(numDocs, translogHandler.appliedOperations());
        if (translogHandler.mappingUpdate != null) {
            assertEquals(1, translogHandler.getRecoveredTypes().size());
            assertTrue(translogHandler.getRecoveredTypes().containsKey("test"));
        } else {
            assertEquals(0, translogHandler.getRecoveredTypes().size());
        }

        engine.close();
        translogHandler = createTranslogHandler(engine.engineConfig.getIndexSettings());
        engine = createEngine(store, primaryTranslogDir, inSyncGlobalCheckpointSupplier);
        engine.refresh("warm_up");
        assertVisibleCount(engine, numDocs, false);
        assertEquals(0, translogHandler.appliedOperations());

        final boolean flush = randomBoolean();
        int randomId = randomIntBetween(numDocs + 1, numDocs + 10);
        ParsedDocument doc = testParsedDocument(Integer.toString(randomId), null, testDocument(), new BytesArray("{}"), null);
        Engine.Index firstIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1, 1,
            VersionType.EXTERNAL, PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
        Engine.IndexResult indexResult = engine.index(firstIndexRequest);
        assertThat(indexResult.getVersion(), equalTo(1L));
        if (flush) {
            engine.flush();
            engine.refresh("test");
        }

        doc = testParsedDocument(Integer.toString(randomId), null, testDocument(), new BytesArray("{}"), null);
        Engine.Index idxRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1, 2,
            VersionType.EXTERNAL, PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
        Engine.IndexResult result = engine.index(idxRequest);
        engine.refresh("test");
        assertThat(result.getVersion(), equalTo(2L));
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), numDocs + 1);
            assertThat(topDocs.totalHits.value, equalTo(numDocs + 1L));
        }

        engine.close();
        translogHandler = createTranslogHandler(engine.engineConfig.getIndexSettings());
        engine = createEngine(store, primaryTranslogDir, inSyncGlobalCheckpointSupplier);
        engine.refresh("warm_up");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), numDocs + 1);
            assertThat(topDocs.totalHits.value, equalTo(numDocs + 1L));
        }
        assertEquals(flush ? 1 : 2, translogHandler.appliedOperations());
        engine.delete(new Engine.Delete("test", Integer.toString(randomId), newUid(doc), primaryTerm.get()));
        if (randomBoolean()) {
            engine.close();
            engine = createEngine(store, primaryTranslogDir, inSyncGlobalCheckpointSupplier);
        }
        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), numDocs);
            assertThat(topDocs.totalHits.value, equalTo((long) numDocs));
        }
    }

    public void testRecoverFromForeignTranslog() throws IOException {
        final int numDocs = randomIntBetween(1, 10);
        for (int i = 0; i < numDocs; i++) {
            ParsedDocument doc = testParsedDocument(Integer.toString(i), null, testDocument(), new BytesArray("{}"), null);
            Engine.Index firstIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1,
                Versions.MATCH_DELETED, VersionType.INTERNAL, PRIMARY, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
            Engine.IndexResult index = engine.index(firstIndexRequest);
            assertThat(index.getVersion(), equalTo(1L));
        }
        assertVisibleCount(engine, numDocs);
        Translog.TranslogGeneration generation = engine.getTranslog().getGeneration();
        engine.close();

        final Path badTranslogLog = createTempDir();
        final String badUUID = Translog.createEmptyTranslog(badTranslogLog, SequenceNumbers.NO_OPS_PERFORMED, shardId, primaryTerm.get());
        Translog translog = new Translog(
            new TranslogConfig(shardId, badTranslogLog, INDEX_SETTINGS, BigArrays.NON_RECYCLING_INSTANCE),
            badUUID, createTranslogDeletionPolicy(INDEX_SETTINGS), () -> SequenceNumbers.NO_OPS_PERFORMED, primaryTerm::get, seqNo -> {});
        translog.add(new Translog.Index("test", "SomeBogusId", 0, primaryTerm.get(),
            "{}".getBytes(Charset.forName("UTF-8"))));
        assertEquals(generation.translogFileGeneration, translog.currentFileGeneration());
        translog.close();

        EngineConfig config = engine.config();
        /* create a TranslogConfig that has been created with a different UUID */
        TranslogConfig translogConfig = new TranslogConfig(shardId, translog.location(), config.getIndexSettings(),
            BigArrays.NON_RECYCLING_INSTANCE);

        EngineConfig brokenConfig = new EngineConfig(
                shardId,
                threadPool,
                config.getIndexSettings(),
                null,
                store,
                newMergePolicy(),
                config.getAnalyzer(),
                config.getSimilarity(),
                new CodecService(null, logger),
                config.getEventListener(),
                IndexSearcher.getDefaultQueryCache(),
                IndexSearcher.getDefaultQueryCachingPolicy(),
                translogConfig,
                TimeValue.timeValueMinutes(5),
                config.getExternalRefreshListener(),
                config.getInternalRefreshListener(),
                null,
                new NoneCircuitBreakerService(),
                () -> UNASSIGNED_SEQ_NO,
                () -> RetentionLeases.EMPTY,
                primaryTerm::get,
                tombstoneDocSupplier(),
                IndexModule.DEFAULT_SNAPSHOT_COMMIT_SUPPLIER);
        expectThrows(EngineCreationFailureException.class, () -> new InternalEngine(brokenConfig));

        engine = createEngine(store, primaryTranslogDir); // and recover again!
        assertVisibleCount(engine, numDocs, true);
    }

    public void testShardNotAvailableExceptionWhenEngineClosedConcurrently() throws IOException, InterruptedException {
        AtomicReference<Exception> exception = new AtomicReference<>();
        String operation = randomFrom("optimize", "refresh", "flush");
        Thread mergeThread = new Thread() {
            @Override
            public void run() {
                boolean stop = false;
                logger.info("try with {}", operation);
                while (stop == false) {
                    try {
                        switch (operation) {
                            case "optimize": {
                                engine.forceMerge(true, 1, false, false,
                                    false, UUIDs.randomBase64UUID());
                                break;
                            }
                            case "refresh": {
                                engine.refresh("test refresh");
                                break;
                            }
                            case "flush": {
                                engine.flush(true, true);
                                break;
                            }
                        }
                    } catch (Exception e) {
                        exception.set(e);
                        stop = true;
                    }
                }
            }
        };
        mergeThread.start();
        engine.close();
        mergeThread.join();
        logger.info("exception caught: ", exception.get());
        assertTrue("expected an Exception that signals shard is not available",
            TransportActions.isShardNotAvailableException(exception.get()));
    }

    /**
     * Tests that when the close method returns the engine is actually guaranteed to have cleaned up and that resources are closed
     */
    public void testConcurrentEngineClosed() throws BrokenBarrierException, InterruptedException {
        Thread[] closingThreads = new Thread[3];
        CyclicBarrier barrier = new CyclicBarrier(1 + closingThreads.length + 1);
        Thread failEngine = new Thread(new AbstractRunnable() {
            @Override
            public void onFailure(Exception e) {
                throw new AssertionError(e);
            }

            @Override
            protected void doRun() throws Exception {
                barrier.await();
                engine.failEngine("test", new RuntimeException("test"));
            }
        });
        failEngine.start();
        for (int i = 0;i < closingThreads.length ; i++) {
            boolean flushAndClose = randomBoolean();
            closingThreads[i] = new Thread(new AbstractRunnable() {
                @Override
                public void onFailure(Exception e) {
                    throw new AssertionError(e);
                }

                @Override
                protected void doRun() throws Exception {
                    barrier.await();
                    if (flushAndClose) {
                        engine.flushAndClose();
                    } else {
                        engine.close();
                    }
                    // try to acquire the writer lock - i.e., everything is closed, we need to synchronize
                    // to avoid races between closing threads
                    synchronized (closingThreads) {
                        try (Lock ignored = store.directory().obtainLock(IndexWriter.WRITE_LOCK_NAME)) {
                            // all good.
                        }
                    }
                }
            });
            closingThreads[i].setName("closingThread_" + i);
            closingThreads[i].start();
        }
        barrier.await();
        failEngine.join();
        for (Thread t : closingThreads) {
            t.join();
        }
    }

    private static class ThrowingIndexWriter extends IndexWriter {
        private AtomicReference<Supplier<Exception>> failureToThrow = new AtomicReference<>();

        ThrowingIndexWriter(Directory d, IndexWriterConfig conf) throws IOException {
            super(d, conf);
        }

        @Override
        public long addDocument(Iterable<? extends IndexableField> doc) throws IOException {
            maybeThrowFailure();
            return super.addDocument(doc);
        }

        private void maybeThrowFailure() throws IOException {
            if (failureToThrow.get() != null) {
                Exception failure = failureToThrow.get().get();
                clearFailure(); // one shot
                if (failure instanceof RuntimeException) {
                    throw (RuntimeException) failure;
                } else if (failure instanceof IOException) {
                    throw (IOException) failure;
                } else {
                    assert false: "unsupported failure class: " + failure.getClass().getCanonicalName();
                }
            }
        }

        @Override
        public long softUpdateDocument(Term term, Iterable<? extends IndexableField> doc, Field... softDeletes) throws IOException {
            maybeThrowFailure();
            return super.softUpdateDocument(term, doc, softDeletes);
        }

        @Override
        public long deleteDocuments(Term... terms) throws IOException {
            maybeThrowFailure();
            return super.deleteDocuments(terms);
        }

        public void setThrowFailure(Supplier<Exception> failureSupplier) {
            failureToThrow.set(failureSupplier);
        }

        public void clearFailure() {
            failureToThrow.set(null);
        }
    }

    public void testHandleDocumentFailure() throws Exception {
        try (Store store = createStore()) {
            final ParsedDocument doc1 = testParsedDocument("1", null, testDocumentWithTextField(), B_1, null);
            final ParsedDocument doc2 = testParsedDocument("2", null, testDocumentWithTextField(), B_1, null);
            final ParsedDocument doc3 = testParsedDocument("3", null, testDocumentWithTextField(), B_1, null);

            AtomicReference<ThrowingIndexWriter> throwingIndexWriter = new AtomicReference<>();
            try (InternalEngine engine = createEngine(defaultSettings, store, createTempDir(), NoMergePolicy.INSTANCE,
                (directory, iwc) -> {
                  throwingIndexWriter.set(new ThrowingIndexWriter(directory, iwc));
                  return throwingIndexWriter.get();
                })
            ) {
                // test document failure while indexing
                if (randomBoolean()) {
                    throwingIndexWriter.get().setThrowFailure(() -> new IOException("simulated"));
                } else {
                    throwingIndexWriter.get().setThrowFailure(() -> new IllegalArgumentException("simulated max token length"));
                }
                // test index with document failure
                Engine.IndexResult indexResult = engine.index(indexForDoc(doc1));
                assertNotNull(indexResult.getFailure());
                assertThat(indexResult.getSeqNo(), equalTo(0L));
                assertThat(indexResult.getVersion(), equalTo(Versions.MATCH_ANY));
                assertNotNull(indexResult.getTranslogLocation());

                throwingIndexWriter.get().clearFailure();
                indexResult = engine.index(indexForDoc(doc1));
                assertThat(indexResult.getSeqNo(), equalTo(1L));
                assertThat(indexResult.getVersion(), equalTo(1L));
                assertNull(indexResult.getFailure());
                assertNotNull(indexResult.getTranslogLocation());
                engine.index(indexForDoc(doc2));

                // test non document level failure is thrown
                if (randomBoolean()) {
                    // simulate close by corruption
                    throwingIndexWriter.get().setThrowFailure(null);
                    UncheckedIOException uncheckedIOException = expectThrows(UncheckedIOException.class, () -> {
                        Engine.Index index = indexForDoc(doc3);
                        index.parsedDoc().rootDoc().add(new StoredField("foo", "bar") {
                            // this is a hack to add a failure during store document which triggers a tragic event
                            // and in turn fails the engine
                            @Override
                            public BytesRef binaryValue() {
                                throw new UncheckedIOException(new MockDirectoryWrapper.FakeIOException());
                            }
                        });
                        engine.index(index);
                    });
                    assertTrue(uncheckedIOException.getCause() instanceof MockDirectoryWrapper.FakeIOException);
                } else {
                    // normal close
                    engine.close();
                }
                // now the engine is closed check we respond correctly
                expectThrows(AlreadyClosedException.class, () -> engine.index(indexForDoc(doc1)));
                expectThrows(AlreadyClosedException.class,
                    () -> engine.delete(new Engine.Delete("test", "", newUid(doc1), primaryTerm.get())));
                expectThrows(AlreadyClosedException.class, () -> engine.noOp(
                    new Engine.NoOp(engine.getLocalCheckpointTracker().generateSeqNo(),
                        engine.config().getPrimaryTermSupplier().getAsLong(),
                        randomFrom(Engine.Operation.Origin.values()), randomNonNegativeLong(), "test")));
            }
        }
    }

    public void testDeleteWithFatalError() throws Exception {
        final IllegalStateException tragicException = new IllegalStateException("fail to store tombstone");
        try (Store store = createStore()) {
            EngineConfig.TombstoneDocSupplier tombstoneDocSupplier = new EngineConfig.TombstoneDocSupplier() {
                @Override
                public ParsedDocument newDeleteTombstoneDoc(String type, String id) {
                    ParsedDocument parsedDocument = tombstoneDocSupplier().newDeleteTombstoneDoc(type, id);
                    parsedDocument.rootDoc().add(new StoredField("foo", "bar") {
                        // this is a hack to add a failure during store document which triggers a tragic event
                        // and in turn fails the engine
                        @Override
                        public BytesRef binaryValue() {
                            throw tragicException;
                        }
                    });
                    return parsedDocument;
                }

                @Override
                public ParsedDocument newNoopTombstoneDoc(String reason) {
                    return tombstoneDocSupplier().newNoopTombstoneDoc(reason);
                }
            };
            EngineConfig config = config(this.engine.config(), store, createTempDir(), tombstoneDocSupplier);
            try (InternalEngine engine = createEngine(null, null, null, config)) {
                final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), SOURCE, null);
                engine.index(indexForDoc(doc));
                expectThrows(IllegalStateException.class,
                    () -> engine.delete(new Engine.Delete("test", "1", newUid("1"), primaryTerm.get())));
                assertTrue(engine.isClosed.get());
                assertSame(tragicException, engine.failedEngine.get());
            }
        }
    }

    public void testDoubleDeliveryPrimary() throws IOException {
        final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        final boolean create = randomBoolean();
        Engine.Index operation = appendOnlyPrimary(doc, false, 1, create);
        Engine.Index retry = appendOnlyPrimary(doc, true, 1, create);
        if (randomBoolean()) {
            Engine.IndexResult indexResult = engine.index(operation);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(0, engine.getNumVersionLookups());
            assertNotNull(indexResult.getTranslogLocation());
            Engine.IndexResult retryResult = engine.index(retry);
            assertLuceneOperations(engine, 1, create ? 0 : 1, 0);
            assertEquals(1, engine.getNumVersionLookups());
            if (create) {
                assertNull(retryResult.getTranslogLocation());
            } else {
                assertNotNull(retryResult.getTranslogLocation());
            }
        } else {
            Engine.IndexResult retryResult = engine.index(retry);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(1, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            Engine.IndexResult indexResult = engine.index(operation);
            assertLuceneOperations(engine, 1, create ? 0 : 1, 0);
            assertEquals(2, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            if (create) {
                assertNull(indexResult.getTranslogLocation());
            } else {
                assertNotNull(indexResult.getTranslogLocation());
            }
        }

        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }
        operation = appendOnlyPrimary(doc, false, 1, create);
        retry = appendOnlyPrimary(doc, true, 1, create);
        if (randomBoolean()) {
            Engine.IndexResult indexResult = engine.index(operation);
            if (create) {
                assertNull(indexResult.getTranslogLocation());
            } else {
                assertNotNull(indexResult.getTranslogLocation());
            }
            Engine.IndexResult retryResult = engine.index(retry);
            if (create) {
                assertNull(retryResult.getTranslogLocation());
            } else {
                assertNotNull(retryResult.getTranslogLocation());
            }
        } else {
            Engine.IndexResult retryResult = engine.index(retry);
            if (create) {
                assertNull(retryResult.getTranslogLocation());
            } else {
                assertNotNull(retryResult.getTranslogLocation());
            }
            Engine.IndexResult indexResult = engine.index(operation);
            if (create) {
                assertNull(indexResult.getTranslogLocation());
            } else {
                assertNotNull(indexResult.getTranslogLocation());
            }
        }

        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }
    }

    public void testDoubleDeliveryReplicaAppendingAndDeleteOnly() throws IOException {
        final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        Engine.Index operation = appendOnlyReplica(doc, false, 1, randomIntBetween(0, 5));
        Engine.Index retry = appendOnlyReplica(doc, true, 1, randomIntBetween(0, 5));
        Engine.Delete delete = new Engine.Delete(operation.type(), operation.id(), operation.uid(),
            Math.max(retry.seqNo(), operation.seqNo())+1, operation.primaryTerm(), operation.version()+1,
                operation.versionType(), REPLICA, operation.startTime()+1, UNASSIGNED_SEQ_NO, 0);
        // operations with a seq# equal or lower to the local checkpoint are not indexed to lucene
        // and the version lookup is skipped
        final boolean sameSeqNo = operation.seqNo() == retry.seqNo();
        if (randomBoolean()) {
            Engine.IndexResult indexResult = engine.index(operation);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(0, engine.getNumVersionLookups());
            assertNotNull(indexResult.getTranslogLocation());
            engine.delete(delete);
            assertEquals(1, engine.getNumVersionLookups());
            assertLuceneOperations(engine, 1, 0, 1);
            Engine.IndexResult retryResult = engine.index(retry);
            assertEquals(sameSeqNo ? 1 : 2, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            assertTrue(retryResult.getTranslogLocation().compareTo(indexResult.getTranslogLocation()) > 0);
        } else {
            Engine.IndexResult retryResult = engine.index(retry);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(0, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            engine.delete(delete);
            assertLuceneOperations(engine, 1, 0, 1);
            assertEquals(1, engine.getNumVersionLookups());
            Engine.IndexResult indexResult = engine.index(operation);
            assertEquals(sameSeqNo ? 1 : 2, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            assertTrue(retryResult.getTranslogLocation().compareTo(indexResult.getTranslogLocation()) < 0);
        }

        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(0, topDocs.totalHits.value);
        }
    }

    public void testDoubleDeliveryReplicaAppendingOnly() throws IOException {
        final Supplier<ParsedDocument> doc = () -> testParsedDocument("1", null, testDocumentWithTextField(),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        boolean replicaOperationIsRetry = randomBoolean();
        Engine.Index operation = appendOnlyReplica(doc.get(), replicaOperationIsRetry, 1, randomIntBetween(0, 5));

        Engine.IndexResult result = engine.index(operation);
        assertLuceneOperations(engine, 1, 0, 0);
        assertEquals(0, engine.getNumVersionLookups());
        assertNotNull(result.getTranslogLocation());

        // promote to primary: first do refresh
        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }

        final boolean create = randomBoolean();
        operation = appendOnlyPrimary(doc.get(), false, 1, create);
        Engine.Index retry = appendOnlyPrimary(doc.get(), true, 1, create);
        if (randomBoolean()) {
            // if the replica operation wasn't a retry, the operation arriving on the newly promoted primary must be a retry
            if (replicaOperationIsRetry) {
                Engine.IndexResult indexResult = engine.index(operation);
                if (create) {
                    assertNull(indexResult.getTranslogLocation());
                } else {
                    assertNotNull(indexResult.getTranslogLocation());
                }
            }
            Engine.IndexResult retryResult = engine.index(retry);
            if (create) {
                assertNull(retryResult.getTranslogLocation());
            } else {
                assertNotNull(retryResult.getTranslogLocation());
            }
        } else {
            Engine.IndexResult retryResult = engine.index(retry);
            if (create) {
                assertNull(retryResult.getTranslogLocation());
            } else {
                assertNotNull(retryResult.getTranslogLocation());
            }
            Engine.IndexResult indexResult = engine.index(operation);
            if (create) {
                assertNull(indexResult.getTranslogLocation());
            } else {
                assertNotNull(indexResult.getTranslogLocation());
            }
        }

        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }
    }

    public void testDoubleDeliveryReplica() throws IOException {
        final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        Engine.Index operation = replicaIndexForDoc(doc, 1, 20, false);
        Engine.Index duplicate = replicaIndexForDoc(doc, 1, 20, true);
        if (randomBoolean()) {
            Engine.IndexResult indexResult = engine.index(operation);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(0, engine.getNumVersionLookups());
            assertNotNull(indexResult.getTranslogLocation());
            if (randomBoolean()) {
                engine.refresh("test");
            }
            Engine.IndexResult retryResult = engine.index(duplicate);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(0, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            assertTrue(retryResult.getTranslogLocation().compareTo(indexResult.getTranslogLocation()) > 0);
        } else {
            Engine.IndexResult retryResult = engine.index(duplicate);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(0, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            if (randomBoolean()) {
                engine.refresh("test");
            }
            Engine.IndexResult indexResult = engine.index(operation);
            assertLuceneOperations(engine, 1, 0, 0);
            assertEquals(0, engine.getNumVersionLookups());
            assertNotNull(retryResult.getTranslogLocation());
            assertTrue(retryResult.getTranslogLocation().compareTo(indexResult.getTranslogLocation()) < 0);
        }

        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }
        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }
        if (engine.engineConfig.getIndexSettings().isSoftDeleteEnabled()) {
            List<Translog.Operation> ops = readAllOperationsInLucene(engine, createMapperService("test"));
            assertThat(ops.stream().map(o -> o.seqNo()).collect(Collectors.toList()), hasItem(20L));
        }
    }

    public void testRetryWithAutogeneratedIdWorksAndNoDuplicateDocs() throws IOException {

        final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        boolean isRetry = false;
        long autoGeneratedIdTimestamp = 0;

        Engine.Index index = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1,
            randomBoolean() ? Versions.MATCH_DELETED : Versions.MATCH_ANY, VersionType.INTERNAL, PRIMARY, System.nanoTime(),
            autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO, 0);
        Engine.IndexResult indexResult = engine.index(index);
        assertThat(indexResult.getVersion(), equalTo(1L));

        index = new Engine.Index(newUid(doc), doc, indexResult.getSeqNo(), index.primaryTerm(), indexResult.getVersion(),
            null, REPLICA, System.nanoTime(), autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO, 0);
        indexResult = replicaEngine.index(index);
        assertThat(indexResult.getVersion(), equalTo(1L));

        isRetry = true;
        index = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1, Versions.MATCH_ANY, VersionType.INTERNAL,
            PRIMARY, System.nanoTime(), autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO, 0);
        indexResult = engine.index(index);
        assertThat(indexResult.getVersion(), equalTo(1L));
        assertNotEquals(indexResult.getSeqNo(), UNASSIGNED_SEQ_NO);
        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }

        index = new Engine.Index(newUid(doc), doc, indexResult.getSeqNo(), index.primaryTerm(), indexResult.getVersion(),
            null, REPLICA, System.nanoTime(), autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO, 0);
        indexResult = replicaEngine.index(index);
        assertThat(indexResult.getResultType(), equalTo(Engine.Result.Type.SUCCESS));
        replicaEngine.refresh("test");
        try (Engine.Searcher searcher = replicaEngine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }
    }

    public void testRetryWithAutogeneratedIdsAndWrongOrderWorksAndNoDuplicateDocs() throws IOException {

        final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        boolean isRetry = true;
        long autoGeneratedIdTimestamp = 0;

        Engine.Index firstIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1,
            randomBoolean() ? Versions.MATCH_DELETED : Versions.MATCH_ANY, VersionType.INTERNAL, PRIMARY, System.nanoTime(),
            autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO, 0);
        Engine.IndexResult result = engine.index(firstIndexRequest);
        assertThat(result.getVersion(), equalTo(1L));

        Engine.Index firstIndexRequestReplica = new Engine.Index(newUid(doc), doc, result.getSeqNo(), firstIndexRequest.primaryTerm(),
            result.getVersion(), null, REPLICA, System.nanoTime(), autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO, 0);
        Engine.IndexResult indexReplicaResult = replicaEngine.index(firstIndexRequestReplica);
        assertThat(indexReplicaResult.getVersion(), equalTo(1L));

        isRetry = false;
        Engine.Index secondIndexRequest = new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1,
            Versions.MATCH_DELETED, VersionType.INTERNAL, PRIMARY, System.nanoTime(), autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO,
            0);
        Engine.IndexResult indexResult = engine.index(secondIndexRequest);
        assertFalse(indexResult.isCreated());
        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }

        Engine.Index secondIndexRequestReplica = new Engine.Index(newUid(doc), doc, result.getSeqNo(), secondIndexRequest.primaryTerm(),
            result.getVersion(), null, REPLICA, System.nanoTime(), autoGeneratedIdTimestamp, isRetry, UNASSIGNED_SEQ_NO, 0);
        replicaEngine.index(secondIndexRequestReplica);
        replicaEngine.refresh("test");
        try (Engine.Searcher searcher = replicaEngine.acquireSearcher("test")) {
            TopDocs topDocs = searcher.search(new MatchAllDocsQuery(), 10);
            assertEquals(1, topDocs.totalHits.value);
        }
    }

    public Engine.Index randomAppendOnly(ParsedDocument doc, boolean retry, final long autoGeneratedIdTimestamp) {
        if (randomBoolean()) {
            return appendOnlyPrimary(doc, retry, autoGeneratedIdTimestamp);
        } else {
            return appendOnlyReplica(doc, retry, autoGeneratedIdTimestamp, 0);
        }
    }

    public Engine.Index appendOnlyPrimary(ParsedDocument doc, boolean retry, final long autoGeneratedIdTimestamp, boolean create) {
        return new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 1, create ? Versions.MATCH_DELETED : Versions.MATCH_ANY,
            VersionType.INTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(), autoGeneratedIdTimestamp, retry,
            UNASSIGNED_SEQ_NO, 0);
    }

    public Engine.Index appendOnlyPrimary(ParsedDocument doc, boolean retry, final long autoGeneratedIdTimestamp) {
        return appendOnlyPrimary(doc, retry, autoGeneratedIdTimestamp, randomBoolean());
    }

    public Engine.Index appendOnlyReplica(ParsedDocument doc, boolean retry, final long autoGeneratedIdTimestamp, final long seqNo) {
        return new Engine.Index(newUid(doc), doc, seqNo, 2, 1, null,
            Engine.Operation.Origin.REPLICA, System.nanoTime(), autoGeneratedIdTimestamp, retry, UNASSIGNED_SEQ_NO, 0);
    }

    public void testRetryConcurrently() throws InterruptedException, IOException {
        Thread[] thread = new Thread[randomIntBetween(3, 5)];
        int numDocs = randomIntBetween(1000, 10000);
        List<Engine.Index> docs = new ArrayList<>();
        final boolean primary = randomBoolean();
        final boolean create = randomBoolean();
        for (int i = 0; i < numDocs; i++) {
            final ParsedDocument doc = testParsedDocument(Integer.toString(i), null,
                testDocumentWithTextField(), new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
            final Engine.Index originalIndex;
            final Engine.Index retryIndex;
            if (primary) {
               originalIndex = appendOnlyPrimary(doc, false, i, create);
               retryIndex = appendOnlyPrimary(doc, true, i, create);
            } else {
                originalIndex = appendOnlyReplica(doc, false, i, i * 2);
                retryIndex = appendOnlyReplica(doc, true, i, i * 2);
            }
            docs.add(originalIndex);
            docs.add(retryIndex);
        }
        Collections.shuffle(docs, random());
        CountDownLatch startGun = new CountDownLatch(thread.length);
        AtomicInteger offset = new AtomicInteger(-1);
        for (int i = 0; i < thread.length; i++) {
            thread[i] = new Thread(() -> {
                startGun.countDown();
                try {
                    startGun.await();
                } catch (InterruptedException e) {
                    throw new AssertionError(e);
                }
                int docOffset;
                while ((docOffset = offset.incrementAndGet()) < docs.size()) {
                    try {
                        engine.index(docs.get(docOffset));
                    } catch (IOException e) {
                        throw new AssertionError(e);
                    }
                }
            });
            thread[i].start();
        }
        for (int i = 0; i < thread.length; i++) {
            thread[i].join();
        }
        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            int count = searcher.count(new MatchAllDocsQuery());
            assertEquals(numDocs, count);
        }
        if (create || primary == false) {
            assertLuceneOperations(engine, numDocs, 0, 0);
        }
    }

    public void testEngineMaxTimestampIsInitialized() throws IOException {

        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final long timestamp1 = Math.abs(randomNonNegativeLong());
        final Path storeDir = createTempDir();
        final Path translogDir = createTempDir();
        final long timestamp2 = randomNonNegativeLong();
        final long maxTimestamp12 = Math.max(timestamp1, timestamp2);
        final Function<Store, EngineConfig> configSupplier =
            store -> config(defaultSettings, store, translogDir,
                NoMergePolicy.INSTANCE, null, null, globalCheckpoint::get);
        try (Store store = createStore(newFSDirectory(storeDir)); Engine engine = createEngine(configSupplier.apply(store))) {
            assertEquals(IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP,
                engine.segmentsStats(false, false).getMaxUnsafeAutoIdTimestamp());
            final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
                new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
            engine.index(appendOnlyPrimary(doc, true, timestamp1));
            assertEquals(timestamp1, engine.segmentsStats(false, false).getMaxUnsafeAutoIdTimestamp());
        }
        try (Store store = createStore(newFSDirectory(storeDir));
             InternalEngine engine = new InternalEngine(configSupplier.apply(store))) {
            assertEquals(IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP,
                engine.segmentsStats(false, false).getMaxUnsafeAutoIdTimestamp());
            engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            assertEquals(timestamp1, engine.segmentsStats(false, false).getMaxUnsafeAutoIdTimestamp());
            final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(),
                new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
            engine.index(appendOnlyPrimary(doc, true, timestamp2, false));
            assertEquals(maxTimestamp12, engine.segmentsStats(false, false).getMaxUnsafeAutoIdTimestamp());
            globalCheckpoint.set(1); // make sure flush cleans up commits for later.
            engine.flush();
        }
        try (Store store = createStore(newFSDirectory(storeDir))) {
            if (randomBoolean() || true) {
                final String translogUUID = Translog.createEmptyTranslog(translogDir,
                    SequenceNumbers.NO_OPS_PERFORMED, shardId, primaryTerm.get());
                store.associateIndexWithNewTranslog(translogUUID);
            }
            try (Engine engine = new InternalEngine(configSupplier.apply(store))) {
                assertEquals(maxTimestamp12, engine.segmentsStats(false, false).getMaxUnsafeAutoIdTimestamp());
            }
        }
    }

    public void testAppendConcurrently() throws InterruptedException, IOException {
        Thread[] thread = new Thread[randomIntBetween(3, 5)];
        int numDocs = randomIntBetween(1000, 10000);
        assertEquals(0, engine.getNumVersionLookups());
        assertEquals(0, engine.getNumIndexVersionsLookups());
        boolean primary = randomBoolean();
        List<Engine.Index> docs = new ArrayList<>();
        for (int i = 0; i < numDocs; i++) {
            final ParsedDocument doc = testParsedDocument(Integer.toString(i), null,
                testDocumentWithTextField(), new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
            Engine.Index index = primary ? appendOnlyPrimary(doc, false, i) : appendOnlyReplica(doc, false, i, i);
            docs.add(index);
        }
        Collections.shuffle(docs, random());
        CountDownLatch startGun = new CountDownLatch(thread.length);

        AtomicInteger offset = new AtomicInteger(-1);
        for (int i = 0; i < thread.length; i++) {
            thread[i] = new Thread() {
                @Override
                public void run() {
                    startGun.countDown();
                    try {
                        startGun.await();
                    } catch (InterruptedException e) {
                        throw new AssertionError(e);
                    }
                    assertThat(engine.getVersionMap().values(), empty());
                    int docOffset;
                    while ((docOffset = offset.incrementAndGet()) < docs.size()) {
                        try {
                            engine.index(docs.get(docOffset));
                        } catch (IOException e) {
                            throw new AssertionError(e);
                        }
                    }
                }
            };
            thread[i].start();
        }
        try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
            assertEquals("unexpected refresh", 0, searcher.getIndexReader().maxDoc());
        }
        for (int i = 0; i < thread.length; i++) {
            thread[i].join();
        }

        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            int count = searcher.count(new MatchAllDocsQuery());
            assertEquals(docs.size(), count);
        }
        assertEquals(0, engine.getNumVersionLookups());
        assertEquals(0, engine.getNumIndexVersionsLookups());
        assertThat(engine.getMaxSeenAutoIdTimestamp(),
            equalTo(docs.stream().mapToLong(Engine.Index::getAutoGeneratedIdTimestamp).max().getAsLong()));
        assertLuceneOperations(engine, numDocs, 0, 0);
    }

    public static long getNumVersionLookups(InternalEngine engine) { // for other tests to access this
        return engine.getNumVersionLookups();
    }

    public static long getNumIndexVersionsLookups(InternalEngine engine) { // for other tests to access this
        return engine.getNumIndexVersionsLookups();
    }

    public void testFailEngineOnRandomIO() throws IOException, InterruptedException {
        MockDirectoryWrapper wrapper = newMockDirectory();
        final Path translogPath = createTempDir("testFailEngineOnRandomIO");
        try (Store store = createStore(wrapper)) {
            CyclicBarrier join = new CyclicBarrier(2);
            CountDownLatch start = new CountDownLatch(1);
            AtomicInteger controller = new AtomicInteger(0);
            EngineConfig config = config(defaultSettings, store, translogPath, newMergePolicy(), new ReferenceManager.RefreshListener() {
                    @Override
                    public void beforeRefresh() throws IOException {
                    }

                    @Override
                    public void afterRefresh(boolean didRefresh) throws IOException {
                        int i = controller.incrementAndGet();
                        if (i == 1) {
                            throw new MockDirectoryWrapper.FakeIOException();
                        } else if (i == 2) {
                            try {
                                start.await();
                            } catch (InterruptedException e) {
                                throw new AssertionError(e);
                            }
                            throw new ElasticsearchException("something completely different");
                        }
                    }
                });
            InternalEngine internalEngine = createEngine(config);
            int docId = 0;
            final ParsedDocument doc = testParsedDocument(Integer.toString(docId), null,
                testDocumentWithTextField(), new BytesArray("{}".getBytes(Charset.defaultCharset())), null);

            Engine.Index index = randomBoolean() ? indexForDoc(doc) : randomAppendOnly(doc, false, docId);
            internalEngine.index(index);
            Runnable r = () ->  {
                try {
                    join.await();
                } catch (Exception e) {
                    throw new AssertionError(e);
                }
                try {
                    internalEngine.refresh("test");
                    fail();
                } catch (AlreadyClosedException ex) {
                    if (ex.getCause() != null) {
                        assertTrue(ex.toString(), ex.getCause() instanceof MockDirectoryWrapper.FakeIOException);
                    }
                } catch (RefreshFailedEngineException ex) {
                    // fine
                } finally {
                    start.countDown();
                }

            };
            Thread t = new Thread(r);
            Thread t1 = new Thread(r);
            t.start();
            t1.start();
            t.join();
            t1.join();
            assertTrue(internalEngine.isClosed.get());
            assertTrue(internalEngine.failedEngine.get() instanceof MockDirectoryWrapper.FakeIOException);
        }
    }

    public void testSequenceIDs() throws Exception {
        Tuple<Long, Long> seqID = getSequenceID(engine, new Engine.Get(false, false,
            "type", "2", newUid("1")));
        // Non-existent doc returns no seqnum and no primary term
        assertThat(seqID.v1(), equalTo(UNASSIGNED_SEQ_NO));
        assertThat(seqID.v2(), equalTo(0L));

        // create a document
        Document document = testDocumentWithTextField();
        document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(B_1), SourceFieldMapper.Defaults.FIELD_TYPE));
        ParsedDocument doc = testParsedDocument("1", null, document, B_1, null);
        engine.index(indexForDoc(doc));
        engine.refresh("test");

        seqID = getSequenceID(engine, newGet(false, doc));
        logger.info("--> got seqID: {}", seqID);
        assertThat(seqID.v1(), equalTo(0L));
        assertThat(seqID.v2(), equalTo(primaryTerm.get()));

        // Index the same document again
        document = testDocumentWithTextField();
        document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(B_1), SourceFieldMapper.Defaults.FIELD_TYPE));
        doc = testParsedDocument("1", null, document, B_1, null);
        engine.index(indexForDoc(doc));
        engine.refresh("test");

        seqID = getSequenceID(engine, newGet(false, doc));
        logger.info("--> got seqID: {}", seqID);
        assertThat(seqID.v1(), equalTo(1L));
        assertThat(seqID.v2(), equalTo(primaryTerm.get()));

        // Index the same document for the third time, this time changing the primary term
        document = testDocumentWithTextField();
        document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(B_1), SourceFieldMapper.Defaults.FIELD_TYPE));
        doc = testParsedDocument("1", null, document, B_1, null);
        engine.index(new Engine.Index(newUid(doc), doc, UNASSIGNED_SEQ_NO, 3,
                        Versions.MATCH_ANY, VersionType.INTERNAL, Engine.Operation.Origin.PRIMARY,
                        System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0));
        engine.refresh("test");

        seqID = getSequenceID(engine, newGet(false, doc));
        logger.info("--> got seqID: {}", seqID);
        assertThat(seqID.v1(), equalTo(2L));
        assertThat(seqID.v2(), equalTo(3L));

        // we can query by the _seq_no
        Engine.Searcher searchResult = engine.acquireSearcher("test");
        MatcherAssert.assertThat(searchResult, EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(1));
        MatcherAssert.assertThat(searchResult,
            EngineSearcherTotalHitsMatcher.engineSearcherTotalHits(LongPoint.newExactQuery("_seq_no", 2), 1));
        searchResult.close();
    }

    public void testLookupSeqNoByIdInLucene() throws Exception {
        int numOps = between(10, 100);
        long seqNo = 0;
        List<Engine.Operation> operations = new ArrayList<>(numOps);
        for (int i = 0; i < numOps; i++) {
            String id = Integer.toString(between(1, 50));
            boolean isIndexing = randomBoolean();
            int copies = frequently() ? 1 : between(2, 4);
            for (int c = 0; c < copies; c++) {
                final ParsedDocument doc = EngineTestCase.createParsedDoc(id, null);
                if (isIndexing) {
                    operations.add(new Engine.Index(EngineTestCase.newUid(doc), doc, seqNo, primaryTerm.get(),
                        i, null, Engine.Operation.Origin.REPLICA, threadPool.relativeTimeInMillis(), -1, true,  UNASSIGNED_SEQ_NO, 0L));
                } else {
                    operations.add(new Engine.Delete(doc.type(), doc.id(), EngineTestCase.newUid(doc), seqNo, primaryTerm.get(),
                        i, null, Engine.Operation.Origin.REPLICA, threadPool.relativeTimeInMillis(), UNASSIGNED_SEQ_NO, 0L));
                }
            }
            seqNo++;
            if (rarely()) {
                seqNo++;
            }
        }
        Randomness.shuffle(operations);
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true);
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        Map<String, Engine.Operation> latestOps = new HashMap<>(); // id -> latest seq_no
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), newMergePolicy(), null))) {
            CheckedRunnable<IOException> lookupAndCheck = () -> {
                try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                    Map<String, Long> liveOps = latestOps.entrySet().stream()
                        .filter(e -> e.getValue().operationType() == Engine.Operation.TYPE.INDEX)
                        .collect(Collectors.toMap(e -> e.getKey(), e -> e.getValue().seqNo()));
                    assertThat(getDocIds(engine, true).stream().collect(Collectors.toMap(e -> e.getId(), e -> e.getSeqNo())),
                        equalTo(liveOps));
                    for (String id : latestOps.keySet()) {
                        String msg = "latestOps=" + latestOps + " op=" + id;
                        DocIdAndSeqNo docIdAndSeqNo = VersionsAndSeqNoResolver.loadDocIdAndSeqNo(searcher.getIndexReader(), newUid(id));
                        if (liveOps.containsKey(id) == false) {
                            assertNull(msg, docIdAndSeqNo);
                        } else {
                            assertNotNull(msg, docIdAndSeqNo);
                            assertThat(msg, docIdAndSeqNo.seqNo, equalTo(latestOps.get(id).seqNo()));
                        }
                    }
                    String notFoundId = randomValueOtherThanMany(liveOps::containsKey, () -> Long.toString(randomNonNegativeLong()));
                    assertNull(VersionsAndSeqNoResolver.loadDocIdAndSeqNo(searcher.getIndexReader(), newUid(notFoundId)));
                }
            };
            for (Engine.Operation op : operations) {
                if (op instanceof Engine.Index) {
                    engine.index((Engine.Index) op);
                    if (latestOps.containsKey(op.id()) == false || latestOps.get(op.id()).seqNo() < op.seqNo()) {
                        latestOps.put(op.id(), op);
                    }
                } else if (op instanceof Engine.Delete) {
                    engine.delete((Engine.Delete) op);
                    if (latestOps.containsKey(op.id()) == false || latestOps.get(op.id()).seqNo() < op.seqNo()) {
                        latestOps.put(op.id(), op);
                    }
                }
                if (randomInt(100) < 10) {
                    engine.refresh("test");
                    lookupAndCheck.run();
                }
                if (rarely()) {
                    engine.flush(false, true);
                    lookupAndCheck.run();
                }
            }
            engine.refresh("test");
            lookupAndCheck.run();
        }
    }

    /**
     * A sequence number generator that will generate a sequence number and if {@code stall} is set to true will wait on the barrier and the
     * referenced latch before returning. If the local checkpoint should advance (because {@code stall} is false, then the value of
     * {@code expectedLocalCheckpoint} is set accordingly.
     *
     * @param latchReference          to latch the thread for the purpose of stalling
     * @param barrier                 to signal the thread has generated a new sequence number
     * @param stall                   whether or not the thread should stall
     * @param expectedLocalCheckpoint the expected local checkpoint after generating a new sequence
     *                                number
     * @return a sequence number generator
     */
    private ToLongBiFunction<Engine, Engine.Operation> getStallingSeqNoGenerator(
            final AtomicReference<CountDownLatch> latchReference,
            final CyclicBarrier barrier,
            final AtomicBoolean stall,
            final AtomicLong expectedLocalCheckpoint) {
        return (engine, operation) -> {
            final long seqNo = generateNewSeqNo(engine);
            final CountDownLatch latch = latchReference.get();
            if (stall.get()) {
                try {
                    barrier.await();
                    latch.await();
                } catch (BrokenBarrierException | InterruptedException e) {
                    throw new RuntimeException(e);
                }
            } else {
                if (expectedLocalCheckpoint.get() + 1 == seqNo) {
                    expectedLocalCheckpoint.set(seqNo);
                }
            }
            return seqNo;
        };
    }

    public void testSequenceNumberAdvancesToMaxSeqOnEngineOpenOnPrimary() throws BrokenBarrierException, InterruptedException, IOException {
        engine.close();
        final int docs = randomIntBetween(1, 32);
        InternalEngine initialEngine = null;
        try {
            final AtomicReference<CountDownLatch> latchReference = new AtomicReference<>(new CountDownLatch(1));
            final CyclicBarrier barrier = new CyclicBarrier(2);
            final AtomicBoolean stall = new AtomicBoolean();
            final AtomicLong expectedLocalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
            final List<Thread> threads = new ArrayList<>();
            initialEngine =
                    createEngine(defaultSettings, store, primaryTranslogDir,
                        newMergePolicy(), null, LocalCheckpointTracker::new, null,
                        getStallingSeqNoGenerator(latchReference, barrier, stall, expectedLocalCheckpoint));
            final InternalEngine finalInitialEngine = initialEngine;
            for (int i = 0; i < docs; i++) {
                final String id = Integer.toString(i);
                final ParsedDocument doc = testParsedDocument(id, null, testDocumentWithTextField(), SOURCE, null);

                stall.set(randomBoolean());
                final Thread thread = new Thread(() -> {
                    try {
                        finalInitialEngine.index(indexForDoc(doc));
                    } catch (IOException e) {
                        throw new AssertionError(e);
                    }
                });
                thread.start();
                if (stall.get()) {
                    threads.add(thread);
                    barrier.await();
                } else {
                    thread.join();
                }
            }

            assertThat(initialEngine.getProcessedLocalCheckpoint(), equalTo(expectedLocalCheckpoint.get()));
            assertThat(initialEngine.getSeqNoStats(-1).getMaxSeqNo(), equalTo((long) (docs - 1)));
            initialEngine.flush(true, true);
            assertEquals(initialEngine.getProcessedLocalCheckpoint(), initialEngine.getPersistedLocalCheckpoint());

            latchReference.get().countDown();
            for (final Thread thread : threads) {
                thread.join();
            }
        } finally {
            IOUtils.close(initialEngine);
        }
        try (InternalEngine recoveringEngine = new InternalEngine(initialEngine.config())) {
            recoveringEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            recoveringEngine.fillSeqNoGaps(2);
            assertEquals(recoveringEngine.getProcessedLocalCheckpoint(), recoveringEngine.getPersistedLocalCheckpoint());
            assertThat(recoveringEngine.getProcessedLocalCheckpoint(), greaterThanOrEqualTo((long) (docs - 1)));
        }
    }


    /** java docs */
    public void testOutOfOrderSequenceNumbersWithVersionConflict() throws IOException {
        final List<Engine.Operation> operations = new ArrayList<>();

        final int numberOfOperations = randomIntBetween(16, 32);
        final AtomicLong sequenceNumber = new AtomicLong();
        final Engine.Operation.Origin origin = randomFrom(LOCAL_TRANSLOG_RECOVERY, PEER_RECOVERY, PRIMARY, REPLICA);
        final LongSupplier sequenceNumberSupplier =
            origin == PRIMARY ? () -> UNASSIGNED_SEQ_NO : sequenceNumber::getAndIncrement;
        final Supplier<ParsedDocument> doc = () -> {
            final Document document = testDocumentWithTextField();
            document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(B_1), SourceFieldMapper.Defaults.FIELD_TYPE));
            return testParsedDocument("1", null, document, B_1, null);
        };
        final Term uid = newUid("1");
        final BiFunction<String, Engine.SearcherScope, Engine.Searcher> searcherFactory = engine::acquireSearcher;
        for (int i = 0; i < numberOfOperations; i++) {
            if (randomBoolean()) {
                final Engine.Index index = new Engine.Index(
                    uid,
                    doc.get(),
                    sequenceNumberSupplier.getAsLong(),
                    1,
                    i,
                    origin == PRIMARY ? VersionType.EXTERNAL : null,
                    origin,
                    System.nanoTime(),
                    IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP,
                    false, UNASSIGNED_SEQ_NO, 0);
                operations.add(index);
            } else {
                final Engine.Delete delete = new Engine.Delete(
                    "test",
                    "1",
                    uid,
                    sequenceNumberSupplier.getAsLong(),
                    1,
                    i,
                    origin == PRIMARY ? VersionType.EXTERNAL : null,
                    origin,
                    System.nanoTime(), UNASSIGNED_SEQ_NO, 0);
                operations.add(delete);
            }
        }

        final boolean exists = operations.get(operations.size() - 1) instanceof Engine.Index;
        Randomness.shuffle(operations);

        for (final Engine.Operation operation : operations) {
            if (operation instanceof Engine.Index) {
                engine.index((Engine.Index) operation);
            } else {
                engine.delete((Engine.Delete) operation);
            }
        }

        final long expectedLocalCheckpoint;
        if (origin == PRIMARY) {
            // we can only advance as far as the number of operations that did not conflict
            int count = 0;

            // each time the version increments as we walk the list, that counts as a successful operation
            long version = -1;
            for (int i = 0; i < numberOfOperations; i++) {
                if (operations.get(i).version() >= version) {
                    count++;
                    version = operations.get(i).version();
                }
            }

            // sequence numbers start at zero, so the expected local checkpoint is the number of successful operations minus one
            expectedLocalCheckpoint = count - 1;
        } else {
            expectedLocalCheckpoint = numberOfOperations - 1;
        }

        assertThat(engine.getProcessedLocalCheckpoint(), equalTo(expectedLocalCheckpoint));
        try (Engine.GetResult result =
                 engine.get(new Engine.Get(true, false, "type", "2", uid), docMapper("type"), randomSearcherWrapper())) {
            assertThat(result.exists(), equalTo(exists));
        }
    }

    /**
     * Test that we do not leak out information on a deleted doc due to it existing in version map. There are at least 2 cases:
     * <ul>
     *     <li>Guessing the deleted seqNo makes the operation succeed</li>
     *     <li>Providing any other seqNo leaks info that the doc was deleted (and its SeqNo)</li>
     * </ul>
     */
    public void testVersionConflictIgnoreDeletedDoc() throws IOException {
        ParsedDocument doc = testParsedDocument("1", null, testDocument(),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        engine.delete(new Engine.Delete("test", "1", newUid("1"), 1));
        for (long seqNo : new long[]{0, 1, randomNonNegativeLong()}) {
            assertDeletedVersionConflict(engine.index(new Engine.Index(newUid("1"), doc, UNASSIGNED_SEQ_NO, 1,
                    Versions.MATCH_ANY, VersionType.INTERNAL,
                    PRIMARY, randomNonNegativeLong(), IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP, false, seqNo, 1)),
                "update: " + seqNo);

            assertDeletedVersionConflict(engine.delete(new Engine.Delete("test", "1", newUid("1"), UNASSIGNED_SEQ_NO, 1,
                    Versions.MATCH_ANY, VersionType.INTERNAL, PRIMARY, randomNonNegativeLong(), seqNo, 1)),
                "delete: " + seqNo);
        }
    }

    private void assertDeletedVersionConflict(Engine.Result result, String operation) {
        assertNotNull("Must have failure for " + operation, result.getFailure());
        assertThat(operation, result.getFailure(), Matchers.instanceOf(VersionConflictEngineException.class));
        VersionConflictEngineException exception = (VersionConflictEngineException) result.getFailure();
        assertThat(operation, exception.getMessage(), containsString("but no document was found"));
        assertThat(exception.getStackTrace(), emptyArray());
    }

    /*
     * This test tests that a no-op does not generate a new sequence number, that no-ops can advance the local checkpoint, and that no-ops
     * are correctly added to the translog.
     */
    public void testNoOps() throws IOException {
        engine.close();
        InternalEngine noOpEngine = null;
        final int maxSeqNo = randomIntBetween(0, 128);
        final int localCheckpoint = randomIntBetween(0, maxSeqNo);
        try {
            final BiFunction<Long, Long, LocalCheckpointTracker> supplier = (ms, lcp) -> new LocalCheckpointTracker(
                    maxSeqNo,
                    localCheckpoint);
            EngineConfig noopEngineConfig = copy(engine.config(), new SoftDeletesRetentionMergePolicy(Lucene.SOFT_DELETES_FIELD,
                () -> new MatchAllDocsQuery(), engine.config().getMergePolicy()));
            noOpEngine = new InternalEngine(noopEngineConfig, IndexWriter.MAX_DOCS, supplier) {
                @Override
                protected long doGenerateSeqNoForOperation(Operation operation) {
                    throw new UnsupportedOperationException();
                }
            };
            noOpEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            final int gapsFilled = noOpEngine.fillSeqNoGaps(primaryTerm.get());
            final String reason = "filling gaps";
            noOpEngine.noOp(new Engine.NoOp(maxSeqNo + 1, primaryTerm.get(), LOCAL_TRANSLOG_RECOVERY, System.nanoTime(), reason));
            assertThat(noOpEngine.getProcessedLocalCheckpoint(), equalTo((long) (maxSeqNo + 1)));
            assertThat(noOpEngine.getTranslog().stats().getUncommittedOperations(), equalTo(gapsFilled));
            noOpEngine.noOp(
                new Engine.NoOp(maxSeqNo + 2, primaryTerm.get(),
                    randomFrom(PRIMARY, REPLICA, PEER_RECOVERY), System.nanoTime(), reason));
            assertThat(noOpEngine.getProcessedLocalCheckpoint(), equalTo((long) (maxSeqNo + 2)));
            assertThat(noOpEngine.getTranslog().stats().getUncommittedOperations(), equalTo(gapsFilled + 1));
            // skip to the op that we added to the translog
            Translog.Operation op;
            Translog.Operation last = null;
            try (Translog.Snapshot snapshot = noOpEngine.getTranslog().newSnapshot()) {
                while ((op = snapshot.next()) != null) {
                    last = op;
                }
            }
            assertNotNull(last);
            assertThat(last, instanceOf(Translog.NoOp.class));
            final Translog.NoOp noOp = (Translog.NoOp) last;
            assertThat(noOp.seqNo(), equalTo((long) (maxSeqNo + 2)));
            assertThat(noOp.primaryTerm(), equalTo(primaryTerm.get()));
            assertThat(noOp.reason(), equalTo(reason));
            if (engine.engineConfig.getIndexSettings().isSoftDeleteEnabled()) {
                MapperService mapperService = createMapperService("test");
                List<Translog.Operation> operationsFromLucene = readAllOperationsInLucene(noOpEngine, mapperService);
                assertThat(operationsFromLucene, hasSize(maxSeqNo + 2 - localCheckpoint)); // fills n gap and 2 manual noop.
                for (int i = 0; i < operationsFromLucene.size(); i++) {
                    assertThat(operationsFromLucene.get(i),
                        equalTo(new Translog.NoOp(localCheckpoint + 1 + i, primaryTerm.get(), "filling gaps")));
                }
                assertConsistentHistoryBetweenTranslogAndLuceneIndex(noOpEngine, mapperService);
            }
        } finally {
            IOUtils.close(noOpEngine);
        }
    }

    /**
     * Verifies that a segment containing only no-ops can be used to look up _version and _seqno.
     */
    public void testSegmentContainsOnlyNoOps() throws Exception {
        final long seqNo = randomLongBetween(0, 1000);
        final long term = this.primaryTerm.get();
        Engine.NoOpResult noOpResult = engine.noOp(new Engine.NoOp(seqNo, term,
            randomFrom(Engine.Operation.Origin.values()), randomNonNegativeLong(), "test"));
        assertThat(noOpResult.getFailure(), nullValue());
        assertThat(noOpResult.getSeqNo(), equalTo(seqNo));
        assertThat(noOpResult.getTerm(), equalTo(term));
        engine.refresh("test");
        Engine.DeleteResult deleteResult = engine.delete(replicaDeleteForDoc("id", 1, seqNo + between(1, 1000), randomNonNegativeLong()));
        assertThat(deleteResult.getFailure(), nullValue());
        engine.refresh("test");
    }

    /**
     * A simple test to check that random combination of operations can coexist in segments and be lookup.
     * This is needed as some fields in Lucene may not exist if a segment misses operation types and this code is to check for that.
     * For example, a segment containing only no-ops does not have neither _uid or _version.
     */
    public void testRandomOperations() throws Exception {
        int numOps = between(10, 100);
        for (int i = 0; i < numOps; i++) {
            String id = Integer.toString(randomIntBetween(1, 10));
            ParsedDocument doc = createParsedDoc(id, null);
            Engine.Operation.TYPE type = randomFrom(Engine.Operation.TYPE.values());
            switch (type) {
                case INDEX:
                    Engine.IndexResult index = engine.index(replicaIndexForDoc(doc, between(1, 100), i, randomBoolean()));
                    assertThat(index.getFailure(), nullValue());
                    break;
                case DELETE:
                    Engine.DeleteResult delete = engine.delete(replicaDeleteForDoc(doc.id(), between(1, 100), i, randomNonNegativeLong()));
                    assertThat(delete.getFailure(), nullValue());
                    break;
                case NO_OP:
                    long seqNo = i;
                    Engine.NoOpResult noOp = engine.noOp(new Engine.NoOp(seqNo, primaryTerm.get(),
                        randomFrom(Engine.Operation.Origin.values()), randomNonNegativeLong(), ""));
                    assertThat(noOp.getTerm(), equalTo(primaryTerm.get()));
                    assertThat(noOp.getSeqNo(), equalTo(seqNo));
                    assertThat(noOp.getFailure(), nullValue());
                    break;
                default:
                    throw new IllegalStateException("Invalid op [" + type + "]");
            }
            if (randomBoolean()) {
                engine.refresh("test");
            }
            if (randomBoolean()) {
                engine.flush();
            }
            if (randomBoolean()) {
                engine.forceMerge(randomBoolean(), between(1, 10), randomBoolean(), false, false, UUIDs.randomBase64UUID());
            }
        }
        if (engine.engineConfig.getIndexSettings().isSoftDeleteEnabled()) {
            List<Translog.Operation> operations = readAllOperationsInLucene(engine, createMapperService("test"));
            assertThat(operations, hasSize(numOps));
        }
    }

    public void testMinGenerationForSeqNo() throws IOException, BrokenBarrierException, InterruptedException {
        engine.close();
        final int numberOfTriplets = randomIntBetween(1, 32);
        InternalEngine actualEngine = null;
        try {
            final AtomicReference<CountDownLatch> latchReference = new AtomicReference<>();
            final CyclicBarrier barrier = new CyclicBarrier(2);
            final AtomicBoolean stall = new AtomicBoolean();
            final AtomicLong expectedLocalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
            final Map<Thread, CountDownLatch> threads = new LinkedHashMap<>();
            actualEngine =
                    createEngine(defaultSettings, store, primaryTranslogDir,
                        newMergePolicy(), null, LocalCheckpointTracker::new, null,
                        getStallingSeqNoGenerator(latchReference, barrier, stall, expectedLocalCheckpoint));
            final InternalEngine finalActualEngine = actualEngine;
            final Translog translog = finalActualEngine.getTranslog();
            final long generation = finalActualEngine.getTranslog().currentFileGeneration();
            for (int i = 0; i < numberOfTriplets; i++) {
                /*
                 * Index three documents with the first and last landing in the same generation and the middle document being stalled until
                 * a later generation.
                 */
                stall.set(false);
                index(finalActualEngine, 3 * i);

                final CountDownLatch latch = new CountDownLatch(1);
                latchReference.set(latch);
                final int skipId = 3 * i + 1;
                stall.set(true);
                final Thread thread = new Thread(() -> {
                    try {
                        index(finalActualEngine, skipId);
                    } catch (IOException e) {
                        throw new AssertionError(e);
                    }
                });
                thread.start();
                threads.put(thread, latch);
                barrier.await();

                stall.set(false);
                index(finalActualEngine, 3 * i + 2);
                finalActualEngine.flush();

                /*
                 * This sequence number landed in the last generation, but the lower and upper bounds for an earlier generation straddle
                 * this sequence number.
                 */
                assertThat(translog.getMinGenerationForSeqNo(3 * i + 1).translogFileGeneration, equalTo(i + generation));
            }

            int i = 0;
            for (final Map.Entry<Thread, CountDownLatch> entry : threads.entrySet()) {
                final Map<String, String> userData = finalActualEngine.commitStats().getUserData();
                assertThat(userData.get(SequenceNumbers.LOCAL_CHECKPOINT_KEY), equalTo(Long.toString(3 * i)));
                entry.getValue().countDown();
                entry.getKey().join();
                finalActualEngine.flush();
                i++;
            }

        } finally {
            IOUtils.close(actualEngine);
        }
    }

    private void index(final InternalEngine engine, final int id) throws IOException {
        final String docId = Integer.toString(id);
        final ParsedDocument doc =
                testParsedDocument(docId, null, testDocumentWithTextField(), SOURCE, null);
        engine.index(indexForDoc(doc));
    }

    /**
     * Return a tuple representing the sequence ID for the given {@code Get}
     * operation. The first value in the tuple is the sequence number, the
     * second is the primary term.
     */
    private Tuple<Long, Long> getSequenceID(Engine engine, Engine.Get get) throws EngineException {
        try (Engine.Searcher searcher = engine.acquireSearcher("get", Engine.SearcherScope.INTERNAL)) {
            final long primaryTerm;
            final long seqNo;
            DocIdAndSeqNo docIdAndSeqNo = VersionsAndSeqNoResolver.loadDocIdAndSeqNo(searcher.getIndexReader(), get.uid());
            if (docIdAndSeqNo == null) {
                primaryTerm = UNASSIGNED_PRIMARY_TERM;
                seqNo = UNASSIGNED_SEQ_NO;
            } else {
                seqNo = docIdAndSeqNo.seqNo;
                NumericDocValues primaryTerms = docIdAndSeqNo.context.reader().getNumericDocValues(SeqNoFieldMapper.PRIMARY_TERM_NAME);
                if (primaryTerms == null || primaryTerms.advanceExact(docIdAndSeqNo.docId) == false) {
                    throw new AssertionError("document does not have primary term [" + docIdAndSeqNo.docId + "]");
                }
                primaryTerm = primaryTerms.longValue();
            }
            return new Tuple<>(seqNo, primaryTerm);
        } catch (Exception e) {
            throw new EngineException(shardId, "unable to retrieve sequence id", e);
        }
    }

    public void testRestoreLocalHistoryFromTranslog() throws IOException {
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        try (Store store = createStore()) {
            final ArrayList<Long> seqNos = new ArrayList<>();
            final int numOps = randomIntBetween(0, 1024);
            for (int i = 0; i < numOps; i++) {
                if (rarely()) {
                    continue;
                }
                seqNos.add((long) i);
            }
            Randomness.shuffle(seqNos);
            final EngineConfig engineConfig;
            final SeqNoStats prevSeqNoStats;
            final List<DocIdSeqNoAndSource> prevDocs;
            try (InternalEngine engine = createEngine(store, createTempDir(), globalCheckpoint::get)) {
                engineConfig = engine.config();
                for (final long seqNo : seqNos) {
                    final String id = Long.toString(seqNo);
                    final ParsedDocument doc = testParsedDocument(id, null,
                        testDocumentWithTextField(), SOURCE, null);
                    engine.index(replicaIndexForDoc(doc, 1, seqNo, false));
                    if (rarely()) {
                        engine.rollTranslogGeneration();
                    }
                    if (rarely()) {
                        engine.flush();
                    }
                }
                globalCheckpoint.set(randomLongBetween(SequenceNumbers.NO_OPS_PERFORMED, engine.getPersistedLocalCheckpoint()));
                engine.syncTranslog();
                prevSeqNoStats = engine.getSeqNoStats(globalCheckpoint.get());
                prevDocs = getDocIds(engine, true);
            }
            try (InternalEngine engine = new InternalEngine(engineConfig)) {
                final long currentTranslogGeneration = engine.getTranslog().currentFileGeneration();
                engine.recoverFromTranslog(translogHandler, globalCheckpoint.get());
                engine.restoreLocalHistoryFromTranslog(translogHandler);
                assertThat(getDocIds(engine, true), equalTo(prevDocs));
                SeqNoStats seqNoStats = engine.getSeqNoStats(globalCheckpoint.get());
                assertThat(seqNoStats.getLocalCheckpoint(), equalTo(prevSeqNoStats.getLocalCheckpoint()));
                assertThat(seqNoStats.getMaxSeqNo(), equalTo(prevSeqNoStats.getMaxSeqNo()));
                assertThat("restore from local translog must not add operations to translog",
                    engine.getTranslog().totalOperationsByMinGen(currentTranslogGeneration), equalTo(0));
            }
            assertConsistentHistoryBetweenTranslogAndLuceneIndex(engine, createMapperService("test"));
        }
    }

    public void testFillUpSequenceIdGapsOnRecovery() throws IOException {
        final int docs = randomIntBetween(1, 32);
        int numDocsOnReplica = 0;
        long maxSeqIDOnReplica = -1;
        long checkpointOnReplica;
        try {
            for (int i = 0; i < docs; i++) {
                final String docId = Integer.toString(i);
                final ParsedDocument doc =
                        testParsedDocument(docId, null, testDocumentWithTextField(), SOURCE, null);
                Engine.Index primaryResponse = indexForDoc(doc);
                Engine.IndexResult indexResult = engine.index(primaryResponse);
                if (randomBoolean()) {
                    numDocsOnReplica++;
                    maxSeqIDOnReplica = indexResult.getSeqNo();
                    replicaEngine.index(replicaIndexForDoc(doc, 1, indexResult.getSeqNo(), false));
                }
            }
            engine.syncTranslog(); // to advance local checkpoint
            replicaEngine.syncTranslog(); // to advance local checkpoint
            checkpointOnReplica = replicaEngine.getProcessedLocalCheckpoint();
        } finally {
            IOUtils.close(replicaEngine);
        }


        boolean flushed = false;
        AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        InternalEngine recoveringEngine = null;
        try {
            assertEquals(docs - 1, engine.getSeqNoStats(-1).getMaxSeqNo());
            assertEquals(docs - 1, engine.getProcessedLocalCheckpoint());
            assertEquals(maxSeqIDOnReplica, replicaEngine.getSeqNoStats(-1).getMaxSeqNo());
            assertEquals(checkpointOnReplica, replicaEngine.getProcessedLocalCheckpoint());
            recoveringEngine = new InternalEngine(copy(replicaEngine.config(), globalCheckpoint::get));
            assertEquals(numDocsOnReplica, getTranslog(recoveringEngine).stats().getUncommittedOperations());
            recoveringEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            assertEquals(maxSeqIDOnReplica, recoveringEngine.getSeqNoStats(-1).getMaxSeqNo());
            assertEquals(checkpointOnReplica, recoveringEngine.getProcessedLocalCheckpoint());
            assertEquals((maxSeqIDOnReplica + 1) - numDocsOnReplica, recoveringEngine.fillSeqNoGaps(2));

            // now snapshot the tlog and ensure the primary term is updated
            try (Translog.Snapshot snapshot = getTranslog(recoveringEngine).newSnapshot()) {
                assertTrue((maxSeqIDOnReplica + 1) - numDocsOnReplica <= snapshot.totalOperations());
                Translog.Operation operation;
                while ((operation = snapshot.next()) != null) {
                    if (operation.opType() == Translog.Operation.Type.NO_OP) {
                        assertEquals(2, operation.primaryTerm());
                    } else {
                        assertEquals(primaryTerm.get(), operation.primaryTerm());
                    }

                }
                assertEquals(maxSeqIDOnReplica, recoveringEngine.getSeqNoStats(-1).getMaxSeqNo());
                assertEquals(maxSeqIDOnReplica, recoveringEngine.getProcessedLocalCheckpoint());
                if ((flushed = randomBoolean())) {
                    globalCheckpoint.set(recoveringEngine.getSeqNoStats(-1).getMaxSeqNo());
                    getTranslog(recoveringEngine).sync();
                    recoveringEngine.flush(true, true);
                }
            }
        } finally {
            IOUtils.close(recoveringEngine);
        }

        // now do it again to make sure we preserve values etc.
        try {
            recoveringEngine = new InternalEngine(copy(replicaEngine.config(), globalCheckpoint::get));
            if (flushed) {
                assertThat(recoveringEngine.getTranslogStats().getUncommittedOperations(), equalTo(0));
            }
            recoveringEngine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            assertEquals(maxSeqIDOnReplica, recoveringEngine.getSeqNoStats(-1).getMaxSeqNo());
            assertEquals(maxSeqIDOnReplica, recoveringEngine.getProcessedLocalCheckpoint());
            assertEquals(0, recoveringEngine.fillSeqNoGaps(3));
            assertEquals(maxSeqIDOnReplica, recoveringEngine.getSeqNoStats(-1).getMaxSeqNo());
            assertEquals(maxSeqIDOnReplica, recoveringEngine.getProcessedLocalCheckpoint());
        } finally {
            IOUtils.close(recoveringEngine);
        }
    }


    public void assertSameReader(Engine.Searcher left, Engine.Searcher right) {
        List<LeafReaderContext> leftLeaves = ElasticsearchDirectoryReader.unwrap(left.getDirectoryReader()).leaves();
        List<LeafReaderContext> rightLeaves = ElasticsearchDirectoryReader.unwrap(right.getDirectoryReader()).leaves();
        assertEquals(rightLeaves.size(), leftLeaves.size());
        for (int i = 0; i < leftLeaves.size(); i++) {
            assertSame(leftLeaves.get(i).reader(), rightLeaves.get(i).reader());
        }
    }

    public void assertNotSameReader(Engine.Searcher left, Engine.Searcher right) {
        List<LeafReaderContext> leftLeaves = ElasticsearchDirectoryReader.unwrap(left.getDirectoryReader()).leaves();
        List<LeafReaderContext> rightLeaves = ElasticsearchDirectoryReader.unwrap(right.getDirectoryReader()).leaves();
        if (rightLeaves.size() == leftLeaves.size()) {
            for (int i = 0; i < leftLeaves.size(); i++) {
                if (leftLeaves.get(i).reader() != rightLeaves.get(i).reader()) {
                    return; // all is well
                }
            }
            fail("readers are same");
        }
    }

    public void testRefreshScopedSearcher() throws IOException {
        try (Store store = createStore();
             InternalEngine engine =
                 // disable merges to make sure that the reader doesn't change unexpectedly during the test
                 createEngine(defaultSettings, store, createTempDir(), NoMergePolicy.INSTANCE)) {
            engine.refresh("warm_up");
            try (Engine.Searcher getSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL);
                 Engine.Searcher searchSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                assertSameReader(getSearcher, searchSearcher);
            }
            for (int i = 0; i < 10; i++) {
                final String docId = Integer.toString(i);
                final ParsedDocument doc =
                    testParsedDocument(docId, null, testDocumentWithTextField(), SOURCE, null);
                Engine.Index primaryResponse = indexForDoc(doc);
                engine.index(primaryResponse);
            }
            assertTrue(engine.refreshNeeded());
            engine.refresh("test", Engine.SearcherScope.INTERNAL, true);
            try (Engine.Searcher getSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL);
                 Engine.Searcher searchSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                assertEquals(10, getSearcher.getIndexReader().numDocs());
                assertEquals(0, searchSearcher.getIndexReader().numDocs());
                assertNotSameReader(getSearcher, searchSearcher);
            }
            engine.refresh("test", Engine.SearcherScope.EXTERNAL, true);

            try (Engine.Searcher getSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL);
                 Engine.Searcher searchSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                assertEquals(10, getSearcher.getIndexReader().numDocs());
                assertEquals(10, searchSearcher.getIndexReader().numDocs());
                assertSameReader(getSearcher, searchSearcher);
            }

            // now ensure external refreshes are reflected on the internal reader
            final String docId = Integer.toString(10);
            final ParsedDocument doc =
                testParsedDocument(docId, null, testDocumentWithTextField(), SOURCE, null);
            Engine.Index primaryResponse = indexForDoc(doc);
            engine.index(primaryResponse);

            engine.refresh("test", Engine.SearcherScope.EXTERNAL, true);

            try (Engine.Searcher getSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL);
                 Engine.Searcher searchSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                assertEquals(11, getSearcher.getIndexReader().numDocs());
                assertEquals(11, searchSearcher.getIndexReader().numDocs());
                assertSameReader(getSearcher, searchSearcher);
            }

            try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                engine.refresh("test", Engine.SearcherScope.INTERNAL, true);
                try (Engine.Searcher nextSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                    assertSame(searcher.getIndexReader(), nextSearcher.getIndexReader());
                }
            }

            try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                engine.refresh("test", Engine.SearcherScope.EXTERNAL, true);
                try (Engine.Searcher nextSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                    assertSame(searcher.getIndexReader(), nextSearcher.getIndexReader());
                }
            }
        }
    }

    public void testSeqNoGenerator() throws IOException {
        engine.close();
        final long seqNo = randomIntBetween(Math.toIntExact(SequenceNumbers.NO_OPS_PERFORMED), Integer.MAX_VALUE);
        final BiFunction<Long, Long, LocalCheckpointTracker> localCheckpointTrackerSupplier = (ms, lcp) -> new LocalCheckpointTracker(
                SequenceNumbers.NO_OPS_PERFORMED,
                SequenceNumbers.NO_OPS_PERFORMED);
        final AtomicLong seqNoGenerator = new AtomicLong(seqNo);
        try (Engine e = createEngine(defaultSettings, store, primaryTranslogDir,
            newMergePolicy(), null, localCheckpointTrackerSupplier,
            null, (engine, operation) -> seqNoGenerator.getAndIncrement())) {
            final String id = "id";
            final Field uidField = new Field("_id", id, IdFieldMapper.Defaults.FIELD_TYPE);
            final String type = "type";
            final Field versionField = new NumericDocValuesField("_version", 0);
            final SeqNoFieldMapper.SequenceIDFields seqID = SeqNoFieldMapper.SequenceIDFields.emptySeqID();
            final ParseContext.Document document = new ParseContext.Document();
            document.add(uidField);
            document.add(versionField);
            document.add(seqID.seqNo);
            document.add(seqID.seqNoDocValue);
            document.add(seqID.primaryTerm);
            final BytesReference source = new BytesArray(new byte[]{1});
            final ParsedDocument parsedDocument = new ParsedDocument(
                    versionField,
                    seqID,
                    id,
                    type,
                    "routing",
                    Collections.singletonList(document),
                    source,
                    XContentType.JSON,
                    null);

            final Engine.Index index = new Engine.Index(
                    new Term("_id", parsedDocument.id()),
                    parsedDocument,
                    UNASSIGNED_SEQ_NO,
                    randomIntBetween(1, 8),
                    Versions.NOT_FOUND,
                    VersionType.INTERNAL,
                    Engine.Operation.Origin.PRIMARY,
                    System.nanoTime(),
                    IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP,
                    randomBoolean(), UNASSIGNED_SEQ_NO, 0);
            final Engine.IndexResult indexResult = e.index(index);
            assertThat(indexResult.getSeqNo(), equalTo(seqNo));
            assertThat(seqNoGenerator.get(), equalTo(seqNo + 1));

            final Engine.Delete delete = new Engine.Delete(
                    type,
                    id,
                    new Term("_id", parsedDocument.id()),
                    UNASSIGNED_SEQ_NO,
                    randomIntBetween(1, 8),
                    Versions.MATCH_ANY,
                    VersionType.INTERNAL,
                    Engine.Operation.Origin.PRIMARY,
                    System.nanoTime(), UNASSIGNED_SEQ_NO, 0);
            final Engine.DeleteResult deleteResult = e.delete(delete);
            assertThat(deleteResult.getSeqNo(), equalTo(seqNo + 1));
            assertThat(seqNoGenerator.get(), equalTo(seqNo + 2));
        }
    }

    public void testKeepTranslogAfterGlobalCheckpoint() throws Exception {
        IOUtils.close(engine, store);
        final IndexSettings indexSettings = new IndexSettings(defaultSettings.getIndexMetadata(), defaultSettings.getNodeSettings(),
            defaultSettings.getScopedSettings());
        IndexMetadata.Builder builder = IndexMetadata.builder(indexSettings.getIndexMetadata())
            .settings(Settings.builder().put(indexSettings.getSettings())
                .put(IndexSettings.INDEX_TRANSLOG_RETENTION_AGE_SETTING.getKey(), randomFrom("-1", "100micros", "30m"))
                .put(IndexSettings.INDEX_TRANSLOG_RETENTION_SIZE_SETTING.getKey(), randomFrom("-1", "512b", "1gb")));
        indexSettings.updateIndexMetadata(builder.build());

        final Path translogPath = createTempDir();
        store = createStore();
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        store.createEmpty();
        final String translogUUID = Translog.createEmptyTranslog(translogPath, globalCheckpoint.get(), shardId, primaryTerm.get());
        store.associateIndexWithNewTranslog(translogUUID);

        final EngineConfig engineConfig = config(indexSettings, store, translogPath,
            NoMergePolicy.INSTANCE, null, null, () -> globalCheckpoint.get());
        final AtomicLong lastSyncedGlobalCheckpointBeforeCommit = new AtomicLong(Translog.readGlobalCheckpoint(translogPath, translogUUID));
        try (InternalEngine engine = new InternalEngine(engineConfig) {
                @Override
                protected void commitIndexWriter(IndexWriter writer, Translog translog, String syncId) throws IOException {
                    lastSyncedGlobalCheckpointBeforeCommit.set(Translog.readGlobalCheckpoint(translogPath, translogUUID));
                    // Advance the global checkpoint during the flush to create a lag between a persisted global checkpoint in the translog
                    // (this value is visible to the deletion policy) and an in memory global checkpoint in the SequenceNumbersService.
                    if (rarely()) {
                        globalCheckpoint.set(randomLongBetween(globalCheckpoint.get(), getPersistedLocalCheckpoint()));
                    }
                    super.commitIndexWriter(writer, translog, syncId);
                }
            }) {
            engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
            int numDocs = scaledRandomIntBetween(10, 100);
            for (int docId = 0; docId < numDocs; docId++) {
                ParseContext.Document document = testDocumentWithTextField();
                document.add(new Field(SourceFieldMapper.NAME, BytesReference.toBytes(B_1), SourceFieldMapper.Defaults.FIELD_TYPE));
                engine.index(indexForDoc(testParsedDocument(Integer.toString(docId), null, document, B_1, null)));
                if (frequently()) {
                    globalCheckpoint.set(randomLongBetween(globalCheckpoint.get(), engine.getPersistedLocalCheckpoint()));
                    engine.syncTranslog();
                }
                if (frequently()) {
                    engine.flush(randomBoolean(), true);
                    final List<IndexCommit> commits = DirectoryReader.listCommits(store.directory());
                    // Keep only one safe commit as the oldest commit.
                    final IndexCommit safeCommit = commits.get(0);
                    if (lastSyncedGlobalCheckpointBeforeCommit.get() == UNASSIGNED_SEQ_NO) {
                        // If the global checkpoint is still unassigned, we keep an empty(eg. initial) commit as a safe commit.
                        assertThat(Long.parseLong(safeCommit.getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                            equalTo(SequenceNumbers.NO_OPS_PERFORMED));
                    } else {
                        assertThat(Long.parseLong(safeCommit.getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                            lessThanOrEqualTo(lastSyncedGlobalCheckpointBeforeCommit.get()));
                    }
                    for (int i = 1; i < commits.size(); i++) {
                        assertThat(Long.parseLong(commits.get(i).getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                            greaterThan(lastSyncedGlobalCheckpointBeforeCommit.get()));
                    }
                    // Make sure we keep all translog operations after the local checkpoint of the safe commit.
                    long localCheckpointFromSafeCommit = Long.parseLong(safeCommit.getUserData().get(SequenceNumbers.LOCAL_CHECKPOINT_KEY));
                    try (Translog.Snapshot snapshot = getTranslog(engine).newSnapshot()) {
                        assertThat(snapshot, SnapshotMatchers.containsSeqNoRange(localCheckpointFromSafeCommit + 1, docId));
                    }
                }
            }
        }
    }

    public void testConcurrentAppendUpdateAndRefresh() throws InterruptedException, IOException {
        int numDocs = scaledRandomIntBetween(100, 1000);
        CountDownLatch latch = new CountDownLatch(2);
        AtomicBoolean done = new AtomicBoolean(false);
        AtomicInteger numDeletes = new AtomicInteger();
        Thread thread = new Thread(() -> {
           try {
               latch.countDown();
               latch.await();
               for (int j = 0; j < numDocs; j++) {
                   String docID = Integer.toString(j);
                   ParsedDocument doc = testParsedDocument(docID, null, testDocumentWithTextField(),
                       new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
                   Engine.Index operation = appendOnlyPrimary(doc, false, 1);
                   engine.index(operation);
                   if (rarely()) {
                       engine.delete(new Engine.Delete(operation.type(), operation.id(), operation.uid(), primaryTerm.get()));
                       numDeletes.incrementAndGet();
                   } else {
                       doc = testParsedDocument(docID, null, testDocumentWithTextField("updated"),
                           new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
                       Engine.Index update = indexForDoc(doc);
                       engine.index(update);
                   }
               }
           } catch (Exception e) {
               throw new AssertionError(e);
           } finally {
               done.set(true);
           }
        });
        thread.start();
        latch.countDown();
        latch.await();
        while (done.get() == false) {
            engine.refresh("test", Engine.SearcherScope.INTERNAL, true);
        }
        thread.join();
        engine.refresh("test", Engine.SearcherScope.INTERNAL, true);
        try (Engine.Searcher searcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
            TopDocs search = searcher.search(new MatchAllDocsQuery(), searcher.getIndexReader().numDocs());
            for (int i = 0; i < search.scoreDocs.length; i++) {
                org.apache.lucene.document.Document luceneDoc = searcher.doc(search.scoreDocs[i].doc);
                assertEquals("updated", luceneDoc.get("value"));
            }
            int totalNumDocs = numDocs - numDeletes.get();
            assertEquals(totalNumDocs, searcher.getIndexReader().numDocs());
        }
    }

    public void testAcquireIndexCommit() throws Exception {
        IOUtils.close(engine, store);
        store = createStore();
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final Engine.IndexCommitRef snapshot;
        final boolean closeSnapshotBeforeEngine = randomBoolean();
        try (InternalEngine engine = createEngine(store, createTempDir(), globalCheckpoint::get)) {
            int numDocs = between(1, 20);
            for (int i = 0; i < numDocs; i++) {
                index(engine, i);
            }
            if (randomBoolean()) {
                globalCheckpoint.set(numDocs - 1);
            }
            final boolean flushFirst = randomBoolean();
            final boolean safeCommit = randomBoolean();
            if (safeCommit) {
                snapshot = engine.acquireSafeIndexCommit();
            } else {
                snapshot = engine.acquireLastIndexCommit(flushFirst);
            }
            int moreDocs = between(1, 20);
            for (int i = 0; i < moreDocs; i++) {
                index(engine, numDocs + i);
            }
            globalCheckpoint.set(numDocs + moreDocs - 1);
            engine.flush();
            // check that we can still read the commit that we captured
            try (IndexReader reader = DirectoryReader.open(snapshot.getIndexCommit())) {
                assertThat(reader.numDocs(), equalTo(flushFirst && safeCommit == false ? numDocs : 0));
            }
            assertThat(DirectoryReader.listCommits(engine.store.directory()), hasSize(2));

            if (closeSnapshotBeforeEngine) {
                snapshot.close();
                // check it's clean up
                engine.flush(true, true);
                assertThat(DirectoryReader.listCommits(engine.store.directory()), hasSize(1));
            }
        }

        if (closeSnapshotBeforeEngine == false) {
            snapshot.close(); // shouldn't throw AlreadyClosedException
        }
    }

    public void testCleanUpCommitsWhenGlobalCheckpointAdvanced() throws Exception {
        IOUtils.close(engine, store);
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings("test",
            Settings.builder().put(defaultSettings.getSettings())
                .put(IndexSettings.INDEX_TRANSLOG_RETENTION_SIZE_SETTING.getKey(), -1)
                .put(IndexSettings.INDEX_TRANSLOG_RETENTION_AGE_SETTING.getKey(), -1).build());
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        try (Store store = createStore();
             InternalEngine engine =
                 createEngine(config(indexSettings, store, createTempDir(), newMergePolicy(),
                     null, null, globalCheckpoint::get))) {
            final int numDocs = scaledRandomIntBetween(10, 100);
            for (int docId = 0; docId < numDocs; docId++) {
                index(engine, docId);
                if (rarely()) {
                    engine.flush(randomBoolean(), true);
                }
            }
            engine.flush(false, randomBoolean());
            globalCheckpoint.set(randomLongBetween(globalCheckpoint.get(), engine.getPersistedLocalCheckpoint()));
            engine.syncTranslog();
            List<IndexCommit> commits = DirectoryReader.listCommits(store.directory());
            assertThat(Long.parseLong(commits.get(0).getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                lessThanOrEqualTo(globalCheckpoint.get()));
            for (int i = 1; i < commits.size(); i++) {
                assertThat(Long.parseLong(commits.get(i).getUserData().get(SequenceNumbers.MAX_SEQ_NO)),
                    greaterThan(globalCheckpoint.get()));
            }
            // Global checkpoint advanced enough - only the last commit is kept.
            globalCheckpoint.set(randomLongBetween(engine.getPersistedLocalCheckpoint(), Long.MAX_VALUE));
            engine.syncTranslog();
            assertThat(DirectoryReader.listCommits(store.directory()), contains(commits.get(commits.size() - 1)));
            assertThat(engine.getTranslog().totalOperations(), equalTo(0));
        }
    }

    public void testCleanupCommitsWhenReleaseSnapshot() throws Exception {
        IOUtils.close(engine, store);
        store = createStore();
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        try (InternalEngine engine = createEngine(store, createTempDir(), globalCheckpoint::get)) {
            final int numDocs = scaledRandomIntBetween(10, 100);
            for (int docId = 0; docId < numDocs; docId++) {
                index(engine, docId);
                if (frequently()) {
                    engine.flush(randomBoolean(), true);
                }
            }
            engine.flush(false, randomBoolean());
            int numSnapshots = between(1, 10);
            final List<Engine.IndexCommitRef> snapshots = new ArrayList<>();
            for (int i = 0; i < numSnapshots; i++) {
                snapshots.add(engine.acquireSafeIndexCommit()); // taking snapshots from the safe commit.
            }
            globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
            engine.syncTranslog();
            final List<IndexCommit> commits = DirectoryReader.listCommits(store.directory());
            for (int i = 0; i < numSnapshots - 1; i++) {
                snapshots.get(i).close();
                // pending snapshots - should not release any commit.
                assertThat(DirectoryReader.listCommits(store.directory()), equalTo(commits));
            }
            snapshots.get(numSnapshots - 1).close(); // release the last snapshot - delete all except the last commit
            assertThat(DirectoryReader.listCommits(store.directory()), hasSize(1));
        }
    }

    public void testShouldPeriodicallyFlush() throws Exception {
        assertThat("Empty engine does not need flushing", engine.shouldPeriodicallyFlush(), equalTo(false));
        // A new engine may have more than one empty translog files - the test should account this extra.
        final Translog translog = engine.getTranslog();
        final IntSupplier uncommittedTranslogOperationsSinceLastCommit = () -> {
            long localCheckpoint = Long.parseLong(engine.getLastCommittedSegmentInfos().userData.get(SequenceNumbers.LOCAL_CHECKPOINT_KEY));
            return translog.totalOperationsByMinGen(translog.getMinGenerationForSeqNo(localCheckpoint + 1).translogFileGeneration);
        };
        final long extraTranslogSizeInNewEngine =
            engine.getTranslog().stats().getUncommittedSizeInBytes() - Translog.DEFAULT_HEADER_SIZE_IN_BYTES;
        int numDocs = between(10, 100);
        for (int id = 0; id < numDocs; id++) {
            final ParsedDocument doc =
                testParsedDocument(Integer.toString(id), null, testDocumentWithTextField(), SOURCE, null);
            engine.index(indexForDoc(doc));
        }
        assertThat("Not exceeded translog flush threshold yet", engine.shouldPeriodicallyFlush(), equalTo(false));
        long flushThreshold = RandomNumbers.randomLongBetween(random(), 120,
            engine.getTranslog().stats().getUncommittedSizeInBytes()- extraTranslogSizeInNewEngine);
        final IndexSettings indexSettings = engine.config().getIndexSettings();
        final IndexMetadata indexMetadata = IndexMetadata.builder(indexSettings.getIndexMetadata())
            .settings(Settings.builder().put(indexSettings.getSettings())
                .put(IndexSettings.INDEX_TRANSLOG_FLUSH_THRESHOLD_SIZE_SETTING.getKey(), flushThreshold + "b")).build();
        indexSettings.updateIndexMetadata(indexMetadata);
        engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
            indexSettings.getSoftDeleteRetentionOperations());
        assertThat(engine.getTranslog().stats().getUncommittedOperations(), equalTo(numDocs));
        assertThat(engine.shouldPeriodicallyFlush(), equalTo(true));
        engine.flush();
        assertThat(uncommittedTranslogOperationsSinceLastCommit.getAsInt(), equalTo(0));
        // Stale operations skipped by Lucene but added to translog - still able to flush
        for (int id = 0; id < numDocs; id++) {
            final ParsedDocument doc =
                testParsedDocument(Integer.toString(id), null, testDocumentWithTextField(), SOURCE, null);
            final Engine.IndexResult result = engine.index(replicaIndexForDoc(doc, 1L, id, false));
            assertThat(result.isCreated(), equalTo(false));
        }
        SegmentInfos lastCommitInfo = engine.getLastCommittedSegmentInfos();
        assertThat(uncommittedTranslogOperationsSinceLastCommit.getAsInt(), equalTo(numDocs));
        assertThat(engine.shouldPeriodicallyFlush(), equalTo(true));
        engine.flush(false, false);
        assertThat(engine.getLastCommittedSegmentInfos(), not(sameInstance(lastCommitInfo)));
        assertThat(uncommittedTranslogOperationsSinceLastCommit.getAsInt(), equalTo(0));
        // If the new index commit still points to the same translog generation as the current index commit,
        // we should not enable the periodically flush condition; otherwise we can get into an infinite loop of flushes.
        generateNewSeqNo(engine); // create a gap here
        for (int id = 0; id < numDocs; id++) {
            if (randomBoolean()) {
                translog.rollGeneration();
            }
            final ParsedDocument doc =
                testParsedDocument("new" + id, null, testDocumentWithTextField(), SOURCE, null);
            engine.index(replicaIndexForDoc(doc, 2L, generateNewSeqNo(engine), false));
            if (engine.shouldPeriodicallyFlush()) {
                engine.flush();
                assertThat(engine.getLastCommittedSegmentInfos(), not(sameInstance(lastCommitInfo)));
                assertThat(engine.shouldPeriodicallyFlush(), equalTo(false));
            }
        }
    }

    public void testShouldPeriodicallyFlushAfterMerge() throws Exception {
        engine.close();
        // Do not use MockRandomMergePolicy as it can cause a force merge performing two merges.
        engine = createEngine(copy(engine.config(), newMergePolicy(random(), false)));
        assertThat("Empty engine does not need flushing", engine.shouldPeriodicallyFlush(), equalTo(false));
        ParsedDocument doc =
            testParsedDocument(Integer.toString(0), null, testDocumentWithTextField(), SOURCE, null);
        engine.index(indexForDoc(doc));
        engine.refresh("test");
        assertThat("Not exceeded translog flush threshold yet", engine.shouldPeriodicallyFlush(), equalTo(false));
        final IndexSettings indexSettings = engine.config().getIndexSettings();
        final IndexMetadata indexMetadata = IndexMetadata.builder(indexSettings.getIndexMetadata())
            .settings(Settings.builder().put(indexSettings.getSettings())
                .put(IndexSettings.INDEX_FLUSH_AFTER_MERGE_THRESHOLD_SIZE_SETTING.getKey(),  "0b")).build();
        indexSettings.updateIndexMetadata(indexMetadata);
        engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
            indexSettings.getSoftDeleteRetentionOperations());
        assertThat(engine.getTranslog().stats().getUncommittedOperations(), equalTo(1));
        assertThat(engine.shouldPeriodicallyFlush(), equalTo(false));
        doc = testParsedDocument(Integer.toString(1), null, testDocumentWithTextField(), SOURCE, null);
        engine.index(indexForDoc(doc));
        assertThat(engine.getTranslog().stats().getUncommittedOperations(), equalTo(2));
        engine.refresh("test");
        engine.forceMerge(false, 1, false, false, false, UUIDs.randomBase64UUID());
        assertBusy(() -> {
            // the merge listner runs concurrently after the force merge returned
            assertThat(engine.shouldPeriodicallyFlush(), equalTo(true));
        });
        engine.flush();
        assertThat(engine.shouldPeriodicallyFlush(), equalTo(false));
    }

    public void testStressShouldPeriodicallyFlush() throws Exception {
        final long flushThreshold = randomLongBetween(120, 5000);
        final long generationThreshold = randomLongBetween(1000, 5000);
        final IndexSettings indexSettings = engine.config().getIndexSettings();
        final IndexMetadata indexMetadata = IndexMetadata.builder(indexSettings.getIndexMetadata())
            .settings(Settings.builder().put(indexSettings.getSettings())
                .put(IndexSettings.INDEX_TRANSLOG_GENERATION_THRESHOLD_SIZE_SETTING.getKey(), generationThreshold + "b")
                .put(IndexSettings.INDEX_TRANSLOG_FLUSH_THRESHOLD_SIZE_SETTING.getKey(), flushThreshold + "b")).build();
        indexSettings.updateIndexMetadata(indexMetadata);
        engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
            indexSettings.getSoftDeleteRetentionOperations());
        final int numOps = scaledRandomIntBetween(100, 10_000);
        for (int i = 0; i < numOps; i++) {
            final long localCheckPoint = engine.getProcessedLocalCheckpoint();
            final long seqno = randomLongBetween(Math.max(0, localCheckPoint), localCheckPoint + 5);
            final ParsedDocument doc =
                testParsedDocument(Long.toString(seqno), null, testDocumentWithTextField(), SOURCE, null);
            engine.index(replicaIndexForDoc(doc, 1L, seqno, false));
            if (rarely() && engine.getTranslog().shouldRollGeneration()) {
                engine.rollTranslogGeneration();
            }
            if (rarely() || engine.shouldPeriodicallyFlush()) {
                engine.flush();
                assertThat(engine.shouldPeriodicallyFlush(), equalTo(false));
            }
        }
    }

    public void testStressUpdateSameDocWhileGettingIt() throws IOException, InterruptedException {
        final int iters = randomIntBetween(1, 1);
        for (int i = 0; i < iters; i++) {
            // this is a reproduction of https://github.com/elastic/elasticsearch/issues/28714
            try (Store store = createStore(); InternalEngine engine = createEngine(store, createTempDir())) {
                final IndexSettings indexSettings = engine.config().getIndexSettings();
                final IndexMetadata indexMetadata = IndexMetadata.builder(indexSettings.getIndexMetadata())
                    .settings(Settings.builder().put(indexSettings.getSettings())
                        .put(IndexSettings.INDEX_GC_DELETES_SETTING.getKey(), TimeValue.timeValueMillis(1))).build();
                engine.engineConfig.getIndexSettings().updateIndexMetadata(indexMetadata);
                engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
                    indexSettings.getSoftDeleteRetentionOperations());
                ParsedDocument document = testParsedDocument(Integer.toString(0), null, testDocumentWithTextField(), SOURCE, null);
                final Engine.Index doc = new Engine.Index(newUid(document), document, UNASSIGNED_SEQ_NO, 0,
                    Versions.MATCH_ANY, VersionType.INTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(),
                    IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP, false, UNASSIGNED_SEQ_NO, 0);
                // first index an append only document and then delete it. such that we have it in the tombstones
                engine.index(doc);
                engine.delete(new Engine.Delete(doc.type(), doc.id(), doc.uid(), primaryTerm.get()));

                // now index more append only docs and refresh so we re-enabel the optimization for unsafe version map
                ParsedDocument document1 = testParsedDocument(Integer.toString(1), null, testDocumentWithTextField(), SOURCE, null);
                engine.index(new Engine.Index(newUid(document1), document1, UNASSIGNED_SEQ_NO, 0, Versions.MATCH_ANY, VersionType.INTERNAL,
                    Engine.Operation.Origin.PRIMARY, System.nanoTime(), IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP, false,
                    UNASSIGNED_SEQ_NO, 0));
                engine.refresh("test");
                ParsedDocument document2 = testParsedDocument(Integer.toString(2), null, testDocumentWithTextField(), SOURCE, null);
                engine.index(new Engine.Index(newUid(document2), document2, UNASSIGNED_SEQ_NO, 0, Versions.MATCH_ANY, VersionType.INTERNAL,
                    Engine.Operation.Origin.PRIMARY, System.nanoTime(), IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP, false,
                    UNASSIGNED_SEQ_NO, 0));
                engine.refresh("test");
                ParsedDocument document3 = testParsedDocument(Integer.toString(3), null, testDocumentWithTextField(), SOURCE, null);
                final Engine.Index doc3 = new Engine.Index(newUid(document3), document3, UNASSIGNED_SEQ_NO, 0,
                    Versions.MATCH_ANY, VersionType.INTERNAL, Engine.Operation.Origin.PRIMARY, System.nanoTime(),
                    IndexRequest.UNSET_AUTO_GENERATED_TIMESTAMP, false, UNASSIGNED_SEQ_NO, 0);
                engine.index(doc3);
                engine.engineConfig.setEnableGcDeletes(true);
                // once we are here the version map is unsafe again and we need to do a refresh inside the get calls to ensure we
                // de-optimize. We also enabled GCDeletes which now causes pruning tombstones inside that refresh that is done internally
                // to ensure we de-optimize. One get call will purne and the other will try to lock the version map concurrently while
                // holding the lock that pruneTombstones needs and we have a deadlock
                CountDownLatch awaitStarted = new CountDownLatch(1);
                Thread thread = new Thread(() -> {
                    awaitStarted.countDown();
                    try (Engine.GetResult getResult = engine.get(new Engine.Get(true, false, doc3.type(),
                            doc3.id(), doc3.uid()), docMapper(doc3.type()), randomSearcherWrapper())) {
                        assertTrue(getResult.exists());
                    }
                });
                thread.start();
                awaitStarted.await();
                try (Engine.GetResult getResult = engine.get(new Engine.Get(true, false, doc.type(),
                        doc.id(), doc.uid()), docMapper(doc.type()), randomSearcherWrapper())) {
                    assertFalse(getResult.exists());
                }
                thread.join();
            }
        }
    }

    public void testPruneOnlyDeletesAtMostLocalCheckpoint() throws Exception {
        final AtomicLong clock = new AtomicLong(0);
        threadPool = spy(threadPool);
        when(threadPool.relativeTimeInMillis()).thenAnswer(invocation -> clock.get());
        final long gcInterval = randomIntBetween(0, 10);
        final IndexSettings indexSettings = engine.config().getIndexSettings();
        final IndexMetadata indexMetadata = IndexMetadata.builder(indexSettings.getIndexMetadata())
            .settings(Settings.builder().put(indexSettings.getSettings())
                .put(IndexSettings.INDEX_GC_DELETES_SETTING.getKey(), TimeValue.timeValueMillis(gcInterval).getStringRep())).build();
        indexSettings.updateIndexMetadata(indexMetadata);
        try (Store store = createStore();
             InternalEngine engine = createEngine(store, createTempDir())) {
            engine.config().setEnableGcDeletes(false);
            for (int i = 0, docs = scaledRandomIntBetween(0, 10); i < docs; i++) {
                index(engine, i);
            }
            final long deleteBatch = between(10, 20);
            final long gapSeqNo = randomLongBetween(
                engine.getSeqNoStats(-1).getMaxSeqNo() + 1, engine.getSeqNoStats(-1).getMaxSeqNo() + deleteBatch);
            for (int i = 0; i < deleteBatch; i++) {
                final long seqno = generateNewSeqNo(engine);
                if (seqno != gapSeqNo) {
                    if (randomBoolean()) {
                        clock.incrementAndGet();
                    }
                    engine.delete(replicaDeleteForDoc(UUIDs.randomBase64UUID(), 1, seqno, threadPool.relativeTimeInMillis()));
                }
            }

            List<DeleteVersionValue> tombstones = new ArrayList<>(tombstonesInVersionMap(engine).values());
            engine.config().setEnableGcDeletes(true);
            // Prune tombstones whose seqno < gap_seqno and timestamp < clock-gcInterval.
            clock.set(randomLongBetween(gcInterval, deleteBatch + gcInterval));
            engine.refresh("test");
            tombstones.removeIf(v -> v.seqNo < gapSeqNo && v.time < clock.get() - gcInterval);
            assertThat(tombstonesInVersionMap(engine).values(), containsInAnyOrder(tombstones.toArray()));
            // Prune tombstones whose seqno at most the local checkpoint (eg. seqno < gap_seqno).
            clock.set(randomLongBetween(deleteBatch + gcInterval * 4/3, 100)); // Need a margin for gcInterval/4.
            engine.refresh("test");
            tombstones.removeIf(v -> v.seqNo < gapSeqNo);
            assertThat(tombstonesInVersionMap(engine).values(), containsInAnyOrder(tombstones.toArray()));
            // Fill the seqno gap - should prune all tombstones.
            clock.set(between(0, 100));
            if (randomBoolean()) {
                engine.index(replicaIndexForDoc(testParsedDocument("d", null, testDocumentWithTextField(),
                    SOURCE, null), 1, gapSeqNo, false));
            } else {
                engine.delete(replicaDeleteForDoc(UUIDs.randomBase64UUID(), Versions.MATCH_ANY,
                    gapSeqNo, threadPool.relativeTimeInMillis()));
            }
            clock.set(randomLongBetween(100 + gcInterval * 4/3, Long.MAX_VALUE)); // Need a margin for gcInterval/4.
            engine.refresh("test");
            assertThat(tombstonesInVersionMap(engine).values(), empty());
        }
    }

    public void testTrimUnsafeCommits() throws Exception {
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final int maxSeqNo = 40;
        final List<Long> seqNos = LongStream.rangeClosed(0, maxSeqNo).boxed().collect(Collectors.toList());
        Collections.shuffle(seqNos, random());
        try (Store store = createStore()) {
            EngineConfig config = config(defaultSettings, store, createTempDir(), newMergePolicy(),
                null, null, globalCheckpoint::get);
            final List<Long> commitMaxSeqNo = new ArrayList<>();
            final long minTranslogGen;
            try (InternalEngine engine = createEngine(config)) {
                for (int i = 0; i < seqNos.size(); i++) {
                    ParsedDocument doc = testParsedDocument(Long.toString(seqNos.get(i)), null, testDocument(),
                        new BytesArray("{}"), null);
                    Engine.Index index = new Engine.Index(newUid(doc), doc, seqNos.get(i), 0,
                        1, null, REPLICA, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, 0);
                    engine.index(index);
                    if (randomBoolean()) {
                        engine.flush();
                        final Long maxSeqNoInCommit = seqNos.subList(0, i + 1).stream().max(Long::compareTo).orElse(-1L);
                        commitMaxSeqNo.add(maxSeqNoInCommit);
                    }
                }
                globalCheckpoint.set(randomInt(maxSeqNo));
                engine.syncTranslog();
                minTranslogGen = engine.getTranslog().getMinFileGeneration();
            }

            store.trimUnsafeCommits(globalCheckpoint.get(), minTranslogGen,config.getIndexSettings().getIndexVersionCreated());
            long safeMaxSeqNo =
                commitMaxSeqNo.stream().filter(s -> s <= globalCheckpoint.get())
                    .reduce((s1, s2) -> s2) // get the last one.
                    .orElse(SequenceNumbers.NO_OPS_PERFORMED);
            final List<IndexCommit> commits = DirectoryReader.listCommits(store.directory());
            assertThat(commits, hasSize(1));
            assertThat(commits.get(0).getUserData().get(SequenceNumbers.MAX_SEQ_NO), equalTo(Long.toString(safeMaxSeqNo)));
            try (IndexReader reader = DirectoryReader.open(commits.get(0))) {
                for (LeafReaderContext context: reader.leaves()) {
                    final NumericDocValues values = context.reader().getNumericDocValues(SeqNoFieldMapper.NAME);
                    if (values != null) {
                        for (int docID = 0; docID < context.reader().maxDoc(); docID++) {
                            if (values.advanceExact(docID) == false) {
                                throw new AssertionError("Document does not have a seq number: " + docID);
                            }
                            assertThat(values.longValue(), lessThanOrEqualTo(globalCheckpoint.get()));
                        }
                    }
                }
            }
        }
    }

    public void testLuceneHistoryOnPrimary() throws Exception {
        final List<Engine.Operation> operations = generateSingleDocHistory(false,
            randomFrom(VersionType.INTERNAL, VersionType.EXTERNAL), 2, 10, 300, "1");
        assertOperationHistoryInLucene(operations);
    }

    public void testLuceneHistoryOnReplica() throws Exception {
        final List<Engine.Operation> operations = generateSingleDocHistory(true,
            randomFrom(VersionType.INTERNAL, VersionType.EXTERNAL), 2, 10, 300, "2");
        Randomness.shuffle(operations);
        assertOperationHistoryInLucene(operations);
    }

    private void assertOperationHistoryInLucene(List<Engine.Operation> operations) throws IOException {
        final MergePolicy keepSoftDeleteDocsMP = new SoftDeletesRetentionMergePolicy(
            Lucene.SOFT_DELETES_FIELD, () -> new MatchAllDocsQuery(), engine.config().getMergePolicy());
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true)
            .put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), randomLongBetween(0, 10));
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        Set<Long> expectedSeqNos = new HashSet<>();
        try (Store store = createStore();
             Engine engine = createEngine(config(indexSettings, store, createTempDir(), keepSoftDeleteDocsMP, null))) {
            for (Engine.Operation op : operations) {
                if (op instanceof Engine.Index) {
                    Engine.IndexResult indexResult = engine.index((Engine.Index) op);
                    assertThat(indexResult.getFailure(), nullValue());
                    expectedSeqNos.add(indexResult.getSeqNo());
                } else {
                    Engine.DeleteResult deleteResult = engine.delete((Engine.Delete) op);
                    assertThat(deleteResult.getFailure(), nullValue());
                    expectedSeqNos.add(deleteResult.getSeqNo());
                }
                if (rarely()) {
                    engine.refresh("test");
                }
                if (rarely()) {
                    engine.flush();
                }
                if (rarely()) {
                    engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
                }
            }
            MapperService mapperService = createMapperService("test");
            List<Translog.Operation> actualOps = readAllOperationsInLucene(engine, mapperService);
            assertThat(actualOps.stream().map(o -> o.seqNo()).collect(Collectors.toList()), containsInAnyOrder(expectedSeqNos.toArray()));
            assertConsistentHistoryBetweenTranslogAndLuceneIndex(engine, mapperService);
        }
    }

    public void testKeepMinRetainedSeqNoByMergePolicy() throws IOException {
        IOUtils.close(engine, store);
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true)
            .put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), randomLongBetween(0, 10));
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        final long primaryTerm = randomLongBetween(1, Long.MAX_VALUE);
        final AtomicLong retentionLeasesVersion = new AtomicLong();
        final AtomicReference<RetentionLeases> retentionLeasesHolder = new AtomicReference<>(
            new RetentionLeases(primaryTerm, retentionLeasesVersion.get(), Collections.emptyList()));
        final List<Engine.Operation> operations = generateSingleDocHistory(true,
            randomFrom(VersionType.INTERNAL, VersionType.EXTERNAL), 2, 10, 300, "2");
        Randomness.shuffle(operations);
        Set<Long> existingSeqNos = new HashSet<>();
        store = createStore();
        engine = createEngine(config(
                indexSettings,
                store,
                createTempDir(),
                newMergePolicy(),
                null,
                null,
                globalCheckpoint::get,
                retentionLeasesHolder::get));
        assertThat(engine.getMinRetainedSeqNo(), equalTo(0L));
        long lastMinRetainedSeqNo = engine.getMinRetainedSeqNo();
        for (Engine.Operation op : operations) {
            final Engine.Result result;
            if (op instanceof Engine.Index) {
                result = engine.index((Engine.Index) op);
            } else {
                result = engine.delete((Engine.Delete) op);
            }
            existingSeqNos.add(result.getSeqNo());
            if (randomBoolean()) {
                engine.syncTranslog(); // advance persisted local checkpoint
                assertEquals(engine.getProcessedLocalCheckpoint(), engine.getPersistedLocalCheckpoint());
                globalCheckpoint.set(
                    randomLongBetween(globalCheckpoint.get(), engine.getLocalCheckpointTracker().getPersistedCheckpoint()));
            }
            if (randomBoolean()) {
                retentionLeasesVersion.incrementAndGet();
                final int length = randomIntBetween(0, 8);
                final List<RetentionLease> leases = new ArrayList<>(length);
                for (int i = 0; i < length; i++) {
                    final String id = randomAlphaOfLength(8);
                    final long retainingSequenceNumber = randomLongBetween(0, Math.max(0, globalCheckpoint.get()));
                    final long timestamp = randomLongBetween(0L, Long.MAX_VALUE);
                    final String source = randomAlphaOfLength(8);
                    leases.add(new RetentionLease(id, retainingSequenceNumber, timestamp, source));
                }
                retentionLeasesHolder.set(new RetentionLeases(primaryTerm, retentionLeasesVersion.get(), leases));
            }
            if (rarely()) {
                settings.put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), randomLongBetween(0, 10));
                indexSettings.updateIndexMetadata(IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
                engine.onSettingsChanged(indexSettings.getTranslogRetentionAge(), indexSettings.getTranslogRetentionSize(),
                    indexSettings.getSoftDeleteRetentionOperations());
            }
            if (rarely()) {
                engine.refresh("test");
            }
            if (rarely()) {
                engine.flush(true, true);
                assertThat(Long.parseLong(engine.getLastCommittedSegmentInfos().userData.get(Engine.MIN_RETAINED_SEQNO)),
                    equalTo(engine.getMinRetainedSeqNo()));
            }
            if (rarely()) {
                engine.forceMerge(randomBoolean(), 1, false, false, false, UUIDs.randomBase64UUID());
            }
            try (Closeable ignored = engine.acquireHistoryRetentionLock(Engine.HistorySource.INDEX)) {
                long minRetainSeqNos = engine.getMinRetainedSeqNo();
                assertThat(minRetainSeqNos, lessThanOrEqualTo(globalCheckpoint.get() + 1));
                Long[] expectedOps = existingSeqNos.stream().filter(seqno -> seqno >= minRetainSeqNos).toArray(Long[]::new);
                Set<Long> actualOps = readAllOperationsInLucene(engine, createMapperService("test")).stream()
                    .map(Translog.Operation::seqNo).collect(Collectors.toSet());
                assertThat(actualOps, containsInAnyOrder(expectedOps));
            }
            try (Engine.IndexCommitRef commitRef = engine.acquireSafeIndexCommit()) {
                IndexCommit safeCommit = commitRef.getIndexCommit();
                if (safeCommit.getUserData().containsKey(Engine.MIN_RETAINED_SEQNO)) {
                    lastMinRetainedSeqNo = Long.parseLong(safeCommit.getUserData().get(Engine.MIN_RETAINED_SEQNO));
                }
            }
        }
        if (randomBoolean()) {
            engine.close();
        } else {
            engine.flushAndClose();
        }
        try (InternalEngine recoveringEngine = new InternalEngine(engine.config())) {
            assertThat(recoveringEngine.getMinRetainedSeqNo(), equalTo(lastMinRetainedSeqNo));
        }
    }

    public void testLastRefreshCheckpoint() throws Exception {
        AtomicBoolean done = new AtomicBoolean();
        Thread[] refreshThreads = new Thread[between(1, 8)];
        CountDownLatch latch = new CountDownLatch(refreshThreads.length);
        for (int i = 0; i < refreshThreads.length; i++) {
            latch.countDown();
            refreshThreads[i] = new Thread(() -> {
                while (done.get() == false) {
                    long checkPointBeforeRefresh = engine.getProcessedLocalCheckpoint();
                    engine.refresh("test", randomFrom(Engine.SearcherScope.values()), true);
                    assertThat(engine.lastRefreshedCheckpoint(), greaterThanOrEqualTo(checkPointBeforeRefresh));
                }
            });
            refreshThreads[i].start();
        }
        latch.await();
        List<Engine.Operation> ops = generateSingleDocHistory(true, VersionType.EXTERNAL,
            1, 10, 1000, "1");
        concurrentlyApplyOps(ops, engine);
        done.set(true);
        for (Thread thread : refreshThreads) {
            thread.join();
        }
        engine.refresh("test");
        assertThat(engine.lastRefreshedCheckpoint(), equalTo(engine.getProcessedLocalCheckpoint()));
    }

    public void testLuceneSnapshotRefreshesOnlyOnce() throws Exception {
        final MapperService mapperService = createMapperService("test");
        final long maxSeqNo = randomLongBetween(10, 50);
        final AtomicLong refreshCounter = new AtomicLong();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
            IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(Settings.builder().
                put(defaultSettings.getSettings()).put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true)).build());
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), newMergePolicy(),
                 null,
                 new ReferenceManager.RefreshListener() {
                     @Override
                     public void beforeRefresh() {
                         refreshCounter.incrementAndGet();
                     }

                     @Override
                     public void afterRefresh(boolean didRefresh) {

                     }
                 }, null, () -> SequenceNumbers.NO_OPS_PERFORMED, new NoneCircuitBreakerService()))) {
            for (long seqNo = 0; seqNo <= maxSeqNo; seqNo++) {
                final ParsedDocument doc = testParsedDocument("id_" + seqNo, null, testDocumentWithTextField("test"),
                    new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
                engine.index(replicaIndexForDoc(doc, 1, seqNo, randomBoolean()));
            }

            final long initialRefreshCount = refreshCounter.get();
            final Thread[] snapshotThreads = new Thread[between(1, 3)];
            CountDownLatch latch = new CountDownLatch(1);
            for (int i = 0; i < snapshotThreads.length; i++) {
                final long min = randomLongBetween(0, maxSeqNo - 5);
                final long max = randomLongBetween(min, maxSeqNo);
                snapshotThreads[i] = new Thread(new AbstractRunnable() {
                    @Override
                    public void onFailure(Exception e) {
                        throw new AssertionError(e);
                    }

                    @Override
                    protected void doRun() throws Exception {
                        latch.await();
                        Translog.Snapshot changes = engine.newChangesSnapshot("test", mapperService, min, max, true);
                        changes.close();
                    }
                });
                snapshotThreads[i].start();
            }
            latch.countDown();
            for (Thread thread : snapshotThreads) {
                thread.join();
            }
            assertThat(refreshCounter.get(), equalTo(initialRefreshCount + 1L));
            assertThat(engine.lastRefreshedCheckpoint(), equalTo(maxSeqNo));
        }
    }

    public void testAcquireSearcherOnClosingEngine() throws Exception {
        engine.close();
        expectThrows(AlreadyClosedException.class, () -> engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL));
    }

    public void testNoOpOnClosingEngine() throws Exception {
        engine.close();
        Settings settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true).build();
        IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
            IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
        assertTrue(indexSettings.isSoftDeleteEnabled());
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), NoMergePolicy.INSTANCE, null))) {
            engine.close();
            expectThrows(AlreadyClosedException.class, () -> engine.noOp(
                new Engine.NoOp(2, primaryTerm.get(), LOCAL_TRANSLOG_RECOVERY, System.nanoTime(), "reason")));
        }
    }

    public void testSoftDeleteOnClosingEngine() throws Exception {
        engine.close();
        Settings settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true).build();
        IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
            IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
        assertTrue(indexSettings.isSoftDeleteEnabled());
        try (Store store = createStore();
             InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), NoMergePolicy.INSTANCE, null))) {
            engine.close();
            expectThrows(AlreadyClosedException.class, () -> engine.delete(replicaDeleteForDoc("test", 42, 7, System.nanoTime())));
        }
    }

    public void testTrackMaxSeqNoOfUpdatesOrDeletesOnPrimary() throws Exception {
        engine.close();
        Set<String> liveDocIds = new HashSet<>();
        engine = new InternalEngine(engine.config());
        assertThat(engine.getMaxSeqNoOfUpdatesOrDeletes(), equalTo(-1L));
        int numOps = between(1, 500);
        for (int i = 0; i < numOps; i++) {
            long currentMaxSeqNoOfUpdates = engine.getMaxSeqNoOfUpdatesOrDeletes();
            ParsedDocument doc = createParsedDoc(Integer.toString(between(1, 100)), null);
            if (randomBoolean()) {
                Engine.IndexResult result = engine.index(indexForDoc(doc));
                if (liveDocIds.add(doc.id()) == false) {
                    assertThat("update operations on primary must advance max_seq_no_of_updates",
                        engine.getMaxSeqNoOfUpdatesOrDeletes(), equalTo(Math.max(currentMaxSeqNoOfUpdates, result.getSeqNo())));
                } else {
                    assertThat("append operations should not advance max_seq_no_of_updates",
                        engine.getMaxSeqNoOfUpdatesOrDeletes(), equalTo(currentMaxSeqNoOfUpdates));
                }
            } else {
                Engine.DeleteResult result = engine.delete(new Engine.Delete(doc.type(), doc.id(), newUid(doc.id()), primaryTerm.get()));
                liveDocIds.remove(doc.id());
                assertThat("delete operations on primary must advance max_seq_no_of_updates",
                    engine.getMaxSeqNoOfUpdatesOrDeletes(), equalTo(Math.max(currentMaxSeqNoOfUpdates, result.getSeqNo())));
            }
        }
    }

    public void testRebuildLocalCheckpointTrackerAndVersionMap() throws Exception {
        Settings.Builder settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_RETENTION_OPERATIONS_SETTING.getKey(), 10000)
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true);
        final IndexMetadata indexMetadata = IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(indexMetadata);
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        Path translogPath = createTempDir();
        List<Engine.Operation> operations = generateHistoryOnReplica(between(1, 500), randomBoolean(), randomBoolean(), randomBoolean());
        List<List<Engine.Operation>> commits = new ArrayList<>();
        commits.add(new ArrayList<>());
        try (Store store = createStore()) {
            EngineConfig config = config(indexSettings, store, translogPath, NoMergePolicy.INSTANCE, null, null, globalCheckpoint::get);
            final List<DocIdSeqNoAndSource> docs;
            try (InternalEngine engine = createEngine(config)) {
                List<Engine.Operation> flushedOperations = new ArrayList<>();
                for (Engine.Operation op : operations) {
                    flushedOperations.add(op);
                    applyOperation(engine, op);
                    if (randomBoolean()) {
                        engine.syncTranslog();
                        globalCheckpoint.set(randomLongBetween(globalCheckpoint.get(), engine.getPersistedLocalCheckpoint()));
                    }
                    if (randomInt(100) < 10) {
                        engine.refresh("test");
                    }
                    if (randomInt(100) < 5) {
                        engine.flush(true, true);
                        flushedOperations.sort(Comparator.comparing(Engine.Operation::seqNo));
                        commits.add(new ArrayList<>(flushedOperations));
                    }
                }
                docs = getDocIds(engine, true);
            }
            List<Engine.Operation> operationsInSafeCommit = null;
            for (int i = commits.size() - 1; i >= 0; i--) {
                if (commits.get(i).stream().allMatch(op -> op.seqNo() <= globalCheckpoint.get())) {
                    operationsInSafeCommit = commits.get(i);
                    break;
                }
            }
            assertThat(operationsInSafeCommit, notNullValue());
            try (InternalEngine engine = new InternalEngine(config)) { // do not recover from translog
                final Map<BytesRef, Engine.Operation> deletesAfterCheckpoint = new HashMap<>();
                for (Engine.Operation op : operationsInSafeCommit) {
                    if (op instanceof Engine.NoOp == false && op.seqNo() > engine.getPersistedLocalCheckpoint()) {
                        deletesAfterCheckpoint.put(new Term(IdFieldMapper.NAME, Uid.encodeId(op.id())).bytes(), op);
                    }
                }
                deletesAfterCheckpoint.values().removeIf(o -> o instanceof Engine.Delete == false);
                final Map<BytesRef, VersionValue> versionMap = engine.getVersionMap();
                for (BytesRef uid : deletesAfterCheckpoint.keySet()) {
                    final VersionValue versionValue = versionMap.get(uid);
                    final Engine.Operation op = deletesAfterCheckpoint.get(uid);
                    final String msg = versionValue + " vs " +
                        "op[" + op.operationType() + "id=" + op.id() + " seqno=" + op.seqNo() + " term=" + op.primaryTerm() + "]";
                    assertThat(versionValue, instanceOf(DeleteVersionValue.class));
                    assertThat(msg, versionValue.seqNo, equalTo(op.seqNo()));
                    assertThat(msg, versionValue.term, equalTo(op.primaryTerm()));
                    assertThat(msg, versionValue.version, equalTo(op.version()));
                }
                assertThat(versionMap.keySet(), equalTo(deletesAfterCheckpoint.keySet()));
                final LocalCheckpointTracker tracker = engine.getLocalCheckpointTracker();
                final Set<Long> seqNosInSafeCommit = operationsInSafeCommit.stream().map(op -> op.seqNo()).collect(Collectors.toSet());
                for (Engine.Operation op : operations) {
                    assertThat(
                        "seq_no=" + op.seqNo() + " max_seq_no=" + tracker.getMaxSeqNo() + "checkpoint=" + tracker.getProcessedCheckpoint(),
                        tracker.hasProcessed(op.seqNo()), equalTo(seqNosInSafeCommit.contains(op.seqNo())));
                }
                engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                assertThat(getDocIds(engine, true), equalTo(docs));
            }
        }
    }

    public void testOpenSoftDeletesIndexWithSoftDeletesDisabled() throws Exception {
        try (Store store = createStore()) {
            Path translogPath = createTempDir();
            final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
            final IndexSettings softDeletesEnabled = IndexSettingsModule.newIndexSettings(
                IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(Settings.builder().
                    put(defaultSettings.getSettings()).put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true)).build());
            final List<DocIdSeqNoAndSource> docs;
            try (InternalEngine engine = createEngine(
                config(softDeletesEnabled, store, translogPath, newMergePolicy(), null, null, globalCheckpoint::get))) {
                List<Engine.Operation> ops = generateHistoryOnReplica(between(1, 100), randomBoolean(), randomBoolean(), randomBoolean());
                applyOperations(engine, ops);
                engine.syncTranslog(); // to advance persisted checkpoint
                globalCheckpoint.set(randomLongBetween(globalCheckpoint.get(), engine.getPersistedLocalCheckpoint()));
                engine.flush();
                docs = getDocIds(engine, true);
            }
            final IndexSettings softDeletesDisabled = IndexSettingsModule.newIndexSettings(
                IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(Settings.builder()
                    .put(defaultSettings.getSettings()).put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), false)).build());
            EngineConfig config = config(softDeletesDisabled, store, translogPath, newMergePolicy(), null, null, globalCheckpoint::get);
            try (InternalEngine engine = createEngine(config)) {
                assertThat(getDocIds(engine, true), equalTo(docs));
            }
        }
    }

    public void testRequireSoftDeletesWhenAccessingChangesSnapshot() throws Exception {
        try (Store store = createStore()) {
            final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
                IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(Settings.builder().
                    put(defaultSettings.getSettings()).put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), false)).build());
            try (InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), newMergePolicy(), null))) {
                AssertionError error = expectThrows(AssertionError.class,
                    () -> engine.newChangesSnapshot("test", createMapperService("test"),
                        0, randomNonNegativeLong(), randomBoolean()));
                assertThat(error.getMessage(), containsString("does not have soft-deletes enabled"));
            }
        }
    }

    void assertLuceneOperations(InternalEngine engine, long expectedAppends, long expectedUpdates, long expectedDeletes) {
        String message = "Lucene operations mismatched;" +
            " appends [actual:" + engine.getNumDocAppends() + ", expected:" + expectedAppends + "]," +
            " updates [actual:" + engine.getNumDocUpdates() + ", expected:" + expectedUpdates + "]," +
            " deletes [actual:" + engine.getNumDocDeletes() + ", expected:" + expectedDeletes + "]";
        assertThat(message, engine.getNumDocAppends(), equalTo(expectedAppends));
        assertThat(message, engine.getNumDocUpdates(), equalTo(expectedUpdates));
        assertThat(message, engine.getNumDocDeletes(), equalTo(expectedDeletes));
    }

    public void testStoreHonorsLuceneVersion() throws IOException {
        for (Version createdVersion : Arrays.asList(
                Version.CURRENT, VersionUtils.getPreviousMinorVersion(), VersionUtils.getFirstVersion())) {
            Settings settings = Settings.builder()
                    .put(indexSettings())
                    .put(IndexMetadata.SETTING_VERSION_CREATED, createdVersion).build();
            IndexSettings indexSettings = IndexSettingsModule.newIndexSettings("test", settings);
            try (Store store = createStore(indexSettings, newDirectory());
                    InternalEngine engine = createEngine(config(indexSettings, store, createTempDir(), NoMergePolicy.INSTANCE, null))) {
                ParsedDocument doc = testParsedDocument("1", null, new Document(),
                        new BytesArray("{}".getBytes("UTF-8")), null);
                engine.index(appendOnlyPrimary(doc, false, 1));
                engine.refresh("test");
                try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                    LeafReader leafReader = getOnlyLeafReader(searcher.getIndexReader());
                    assertEquals(createdVersion.luceneVersion.major, leafReader.getMetaData().getCreatedVersionMajor());
                }
            }
        }
    }

    public void testMaxSeqNoInCommitUserData() throws Exception {
        AtomicBoolean running = new AtomicBoolean(true);
        Thread rollTranslog = new Thread(() -> {
            while (running.get() && engine.getTranslog().currentFileGeneration() < 500) {
                engine.rollTranslogGeneration(); // make adding operations to translog slower
            }
        });
        rollTranslog.start();

        Thread indexing = new Thread(() -> {
            long seqNo = 0;
            while (running.get() && seqNo <= 1000) {
                try {
                    String id = Long.toString(between(1, 50));
                    if (randomBoolean()) {
                        ParsedDocument doc = testParsedDocument(id, null, testDocumentWithTextField(), SOURCE, null);
                        engine.index(replicaIndexForDoc(doc, 1L, seqNo, false));
                    } else {
                        engine.delete(replicaDeleteForDoc(id, 1L, seqNo, 0L));
                    }
                    seqNo++;
                } catch (IOException e) {
                    throw new AssertionError(e);
                }
            }
        });
        indexing.start();

        int numCommits = between(5, 20);
        for (int i = 0; i < numCommits; i++) {
            engine.flush(false, true);
        }
        running.set(false);
        indexing.join();
        rollTranslog.join();
        assertMaxSeqNoInCommitUserData(engine);
    }

    public void testRefreshAndCloseEngineConcurrently() throws Exception {
        AtomicBoolean stopped = new AtomicBoolean();
        Semaphore indexedDocs = new Semaphore(0);
        Thread indexer = new Thread(() -> {
            while (stopped.get() == false) {
                String id = Integer.toString(randomIntBetween(1, 100));
                try {
                    engine.index(indexForDoc(createParsedDoc(id, null)));
                    indexedDocs.release();
                } catch (IOException e) {
                    throw new AssertionError(e);
                } catch (AlreadyClosedException e) {
                    return;
                }
            }
        });

        Thread refresher = new Thread(() -> {
            while (stopped.get() == false) {
                try {
                    engine.refresh("test", randomFrom(Engine.SearcherScope.values()), randomBoolean());
                } catch (AlreadyClosedException e) {
                    return;
                }
            }
        });
        indexer.start();
        refresher.start();
        indexedDocs.acquire(randomIntBetween(1, 100));
        try {
            if (randomBoolean()) {
                engine.failEngine("test", new IOException("simulated error"));
            } else {
                engine.close();
            }
        } finally {
            stopped.set(true);
            indexer.join();
            refresher.join();
        }
        assertThat(engine.config().getCircuitBreakerService().getBreaker(CircuitBreaker.ACCOUNTING).getUsed(), equalTo(0L));
    }

    public void testPruneAwayDeletedButRetainedIds() throws Exception {
        IOUtils.close(engine, store);
        Settings settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true).build();
        IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
            IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
        store = createStore(indexSettings, newDirectory());
        LogDocMergePolicy policy = new LogDocMergePolicy();
        policy.setMinMergeDocs(10000);
        try (InternalEngine engine = createEngine(indexSettings, store, createTempDir(), policy)) {
            int numDocs = between(1, 20);
            for (int i = 0; i < numDocs; i++) {
                index(engine, i);
            }
            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
            engine.delete(new Engine.Delete("_doc", "0", newUid("0"), primaryTerm.get()));
            engine.refresh("test");
            // now we have 2 segments since we now added a tombstone plus the old segment with the delete
            try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                IndexReader reader = searcher.getIndexReader();
                assertEquals(2, reader.leaves().size());
                LeafReaderContext leafReaderContext = reader.leaves().get(0);
                LeafReader leafReader = leafReaderContext.reader();
                assertEquals("the delete and the tombstone", 1, leafReader.numDeletedDocs());
                assertEquals(numDocs, leafReader.maxDoc());
                Terms id = leafReader.terms("_id");
                assertNotNull(id);
                assertEquals("deleted IDs are NOT YET pruned away", reader.numDocs() + 1, id.size());
                TermsEnum iterator = id.iterator();
                assertTrue(iterator.seekExact(Uid.encodeId("0")));
            }

            // lets force merge the tombstone and the original segment and make sure the doc is still there but the ID term is gone
            engine.forceMerge(true, 1, false, false, false, UUIDs.randomBase64UUID());
            engine.refresh("test");
            try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
                IndexReader reader = searcher.getIndexReader();
                assertEquals(1, reader.leaves().size());
                LeafReaderContext leafReaderContext = reader.leaves().get(0);
                LeafReader leafReader = leafReaderContext.reader();
                assertEquals("the delete and the tombstone", 2, leafReader.numDeletedDocs());
                assertEquals(numDocs + 1, leafReader.maxDoc());
                Terms id = leafReader.terms("_id");
                if (numDocs == 1) {
                    assertNull(id); // everything is pruned away
                    assertEquals(0, leafReader.numDocs());
                } else {
                    assertNotNull(id);
                    assertEquals("deleted IDs are pruned away", reader.numDocs(), id.size());
                    TermsEnum iterator = id.iterator();
                    assertFalse(iterator.seekExact(Uid.encodeId("0")));
                }
            }
        }
    }

    public void testRecoverFromLocalTranslog() throws Exception {
        final AtomicLong globalCheckpoint = new AtomicLong(SequenceNumbers.NO_OPS_PERFORMED);
        Path translogPath = createTempDir();
        List<Engine.Operation> operations = generateHistoryOnReplica(between(1, 500), randomBoolean(), randomBoolean(), randomBoolean());
        try (Store store = createStore()) {
            EngineConfig config = config(defaultSettings, store, translogPath, newMergePolicy(), null, null, globalCheckpoint::get);
            final List<DocIdSeqNoAndSource> docs;
            try (InternalEngine engine = createEngine(config)) {
                for (Engine.Operation op : operations) {
                    applyOperation(engine, op);
                    if (randomBoolean()) {
                        engine.syncTranslog();
                        globalCheckpoint.set(randomLongBetween(globalCheckpoint.get(), engine.getPersistedLocalCheckpoint()));
                    }
                    if (randomInt(100) < 10) {
                        engine.refresh("test");
                    }
                    if (randomInt(100) < 5) {
                        engine.flush();
                    }
                    if (randomInt(100) < 5) {
                        engine.forceMerge(randomBoolean(), 1, false, false, false, UUIDs.randomBase64UUID());
                    }
                }
                if (randomBoolean()) {
                    // engine is flushed properly before shutting down.
                    engine.syncTranslog();
                    globalCheckpoint.set(engine.getPersistedLocalCheckpoint());
                    engine.flush();
                }
                docs = getDocIds(engine, true);
            }
            try (InternalEngine engine = new InternalEngine(config)) {
                engine.onSettingsChanged(TimeValue.MINUS_ONE, ByteSizeValue.ZERO, 0);
                engine.recoverFromTranslog(translogHandler, Long.MAX_VALUE);
                assertThat(getDocIds(engine, randomBoolean()), equalTo(docs));
                if (engine.getSeqNoStats(globalCheckpoint.get()).getMaxSeqNo() == globalCheckpoint.get()) {
                    assertThat("engine should trim all unreferenced translog after recovery",
                        engine.getTranslog().getMinFileGeneration(), equalTo(engine.getTranslog().currentFileGeneration()));
                }
            }
        }
    }

    private Map<BytesRef, DeleteVersionValue> tombstonesInVersionMap(InternalEngine engine) {
        return engine.getVersionMap().entrySet().stream()
            .filter(e -> e.getValue() instanceof DeleteVersionValue)
            .collect(Collectors.toMap(e -> e.getKey(), e -> (DeleteVersionValue) e.getValue()));
    }

    public void testTreatDocumentFailureAsFatalError() throws Exception {
        AtomicReference<IOException> addDocException = new AtomicReference<>();
        IndexWriterFactory indexWriterFactory = (dir, iwc) -> new IndexWriter(dir, iwc) {
            @Override
            public long addDocument(Iterable<? extends IndexableField> doc) throws IOException {
                final IOException ex = addDocException.getAndSet(null);
                if (ex != null) {
                    throw ex;
                }
                return super.addDocument(doc);
            }
        };
        try (Store store = createStore();
             InternalEngine engine = createEngine(defaultSettings, store, createTempDir(), NoMergePolicy.INSTANCE, indexWriterFactory)) {
            final ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField(), SOURCE, null);
            Engine.Operation.Origin origin = randomFrom(REPLICA, LOCAL_RESET, PEER_RECOVERY);
            Engine.Index index = new Engine.Index(newUid(doc), doc, randomNonNegativeLong(), primaryTerm.get(),
                randomNonNegativeLong(), null, origin, System.nanoTime(), -1, false, UNASSIGNED_SEQ_NO, UNASSIGNED_PRIMARY_TERM);
            addDocException.set(new IOException("simulated"));
            expectThrows(IOException.class, () -> engine.index(index));
            assertTrue(engine.isClosed.get());
            assertNotNull(engine.failedEngine.get());
        }
    }

    /**
     * We can trim translog on primary promotion and peer recovery based on the fact we add operations with either
     * REPLICA or PEER_RECOVERY origin to translog although they already exist in the engine (i.e. hasProcessed() == true).
     * If we decide not to add those already-processed operations to translog, we need to study carefully the consequence
     * of the translog trimming in these two places.
     */
    public void testAlwaysRecordReplicaOrPeerRecoveryOperationsToTranslog() throws Exception {
        List<Engine.Operation> operations = generateHistoryOnReplica(between(1, 100), randomBoolean(), randomBoolean(), randomBoolean());
        applyOperations(engine, operations);
        Set<Long> seqNos = operations.stream().map(Engine.Operation::seqNo).collect(Collectors.toSet());
        try (Translog.Snapshot snapshot = getTranslog(engine).newSnapshot()) {
            assertThat(snapshot.totalOperations(), equalTo(operations.size()));
            assertThat(TestTranslog.drainSnapshot(snapshot, false).stream().map(Translog.Operation::seqNo).collect(Collectors.toSet()),
                equalTo(seqNos));
        }
        primaryTerm.set(randomLongBetween(primaryTerm.get(), Long.MAX_VALUE));
        engine.rollTranslogGeneration();
        engine.trimOperationsFromTranslog(primaryTerm.get(), NO_OPS_PERFORMED); // trim everything in translog
        try (Translog.Snapshot snapshot = getTranslog(engine).newSnapshot()) {
            assertThat(snapshot.totalOperations(), equalTo(0));
            assertNull(snapshot.next());
        }
        applyOperations(engine, operations);
        try (Translog.Snapshot snapshot = getTranslog(engine).newSnapshot()) {
            assertThat(snapshot.totalOperations(), equalTo(operations.size()));
            assertThat(TestTranslog.drainSnapshot(snapshot, false).stream().map(Translog.Operation::seqNo).collect(Collectors.toSet()),
                equalTo(seqNos));
        }
    }

    public void testNoOpFailure() throws IOException {
        engine.close();
        final Settings settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), true).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
            IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
        try (Store store = createStore();
             Engine engine = createEngine((dir, iwc) -> new IndexWriter(dir, iwc) {

                     @Override
                     public long addDocument(Iterable<? extends IndexableField> doc) throws IOException {
                         throw new IllegalArgumentException("fatal");
                     }

                 },
                 null,
                 null,
                 config(indexSettings, store, createTempDir(), NoMergePolicy.INSTANCE, null))) {
            final Engine.NoOp op = new Engine.NoOp(0, 0, PRIMARY, System.currentTimeMillis(), "test");
            final IllegalArgumentException e = expectThrows(IllegalArgumentException. class, () -> engine.noOp(op));
            assertThat(e.getMessage(), equalTo("fatal"));
            assertTrue(engine.isClosed.get());
            assertThat(engine.failedEngine.get(), not(nullValue()));
            assertThat(engine.failedEngine.get(), instanceOf(IllegalArgumentException.class));
            assertThat(engine.failedEngine.get().getMessage(), equalTo("fatal"));
        }
    }

    public void testDeleteFailureSoftDeletesEnabledDocAlreadyDeleted() throws IOException {
        runTestDeleteFailure(true, InternalEngine::delete);
    }

    public void testDeleteFailureSoftDeletesEnabled() throws IOException {
        runTestDeleteFailure(true, (engine, op) -> {});
    }

    public void testDeleteFailureSoftDeletesDisabled() throws IOException {
        runTestDeleteFailure(false, (engine, op) -> {});
    }

    private void runTestDeleteFailure(
        final boolean softDeletesEnabled,
        final CheckedBiConsumer<InternalEngine, Engine.Delete, IOException> consumer) throws IOException {
        engine.close();
        final Settings settings = Settings.builder()
            .put(defaultSettings.getSettings())
            .put(IndexSettings.INDEX_SOFT_DELETES_SETTING.getKey(), softDeletesEnabled).build();
        final IndexSettings indexSettings = IndexSettingsModule.newIndexSettings(
            IndexMetadata.builder(defaultSettings.getIndexMetadata()).settings(settings).build());
        final AtomicReference<ThrowingIndexWriter> iw = new AtomicReference<>();
        try (Store store = createStore();
             InternalEngine engine = createEngine(
                 (dir, iwc) -> {
                     iw.set(new ThrowingIndexWriter(dir, iwc));
                     return iw.get();
                 },
                 null,
                 null,
                 config(indexSettings, store, createTempDir(), NoMergePolicy.INSTANCE, null))) {
            engine.index(new Engine.Index(newUid("0"), primaryTerm.get(), InternalEngineTests.createParsedDoc("0", null)));
            final Engine.Delete op = new Engine.Delete("_doc", "0", newUid("0"), primaryTerm.get());
            consumer.accept(engine, op);
            iw.get().setThrowFailure(() -> new IllegalArgumentException("fatal"));
            final IllegalArgumentException e = expectThrows(IllegalArgumentException. class, () -> engine.delete(op));
            assertThat(e.getMessage(), equalTo("fatal"));
            assertTrue(engine.isClosed.get());
            assertThat(engine.failedEngine.get(), not(nullValue()));
            assertThat(engine.failedEngine.get(), instanceOf(IllegalArgumentException.class));
            assertThat(engine.failedEngine.get().getMessage(), equalTo("fatal"));
        }
    }

    public void testIndexThrottling() throws Exception {
        final Engine.Index indexWithThrottlingCheck = spy(indexForDoc(createParsedDoc("1", null)));
        final Engine.Index indexWithoutThrottlingCheck = spy(indexForDoc(createParsedDoc("2", null)));
        doAnswer(invocation -> {
            try {
                assertTrue(engine.throttleLockIsHeldByCurrentThread());
                return invocation.callRealMethod();
            } catch (InterruptedException ex) {
                throw new RuntimeException(ex);
            }
        }).when(indexWithThrottlingCheck).startTime();
        doAnswer(invocation -> {
            try {
                assertFalse(engine.throttleLockIsHeldByCurrentThread());
                return invocation.callRealMethod();
            } catch (InterruptedException ex) {
                throw new RuntimeException(ex);
            }
        }).when(indexWithoutThrottlingCheck).startTime();
        engine.activateThrottling();
        engine.index(indexWithThrottlingCheck);
        engine.deactivateThrottling();
        engine.index(indexWithoutThrottlingCheck);
        verify(indexWithThrottlingCheck, atLeastOnce()).startTime();
        verify(indexWithoutThrottlingCheck, atLeastOnce()).startTime();
    }

    public void testRealtimeGetOnlyRefreshIfNeeded() throws Exception {
        final AtomicInteger refreshCount = new AtomicInteger();
        final ReferenceManager.RefreshListener refreshListener = new ReferenceManager.RefreshListener() {
            @Override
            public void beforeRefresh() {

            }

            @Override
            public void afterRefresh(boolean didRefresh) {
                if (didRefresh) {
                    refreshCount.incrementAndGet();
                }
            }
        };
        try (Store store = createStore()) {
            final EngineConfig config = config(defaultSettings, store, createTempDir(), newMergePolicy(), null,
                refreshListener, null, null, engine.config().getCircuitBreakerService());
            try (InternalEngine engine = createEngine(config)) {
                int numDocs = randomIntBetween(10, 100);
                Set<String> ids = new HashSet<>();
                for (int i = 0; i < numDocs; i++) {
                    String id = Integer.toString(i);
                    engine.index(indexForDoc(createParsedDoc(id, null)));
                    ids.add(id);
                }
                final int refreshCountBeforeGet = refreshCount.get();
                Thread[] getters = new Thread[randomIntBetween(1, 4)];
                Phaser phaser = new Phaser(getters.length + 1);
                for (int t = 0; t < getters.length; t++) {
                    getters[t] = new Thread(() -> {
                        phaser.arriveAndAwaitAdvance();
                        int iters = randomIntBetween(1, 10);
                        for (int i = 0; i < iters; i++) {
                            ParsedDocument doc = createParsedDoc(randomFrom(ids), null);
                            try (Engine.GetResult getResult =
                                     engine.get(newGet(true, doc), docMapper(doc.type()), randomSearcherWrapper())) {
                                assertThat(getResult.exists(), equalTo(true));
                                assertThat(getResult.docIdAndVersion(), notNullValue());
                            }
                        }
                    });
                    getters[t].start();
                }
                phaser.arriveAndAwaitAdvance();
                for (int i = 0; i < numDocs; i++) {
                    engine.index(indexForDoc(createParsedDoc("more-" + i, null)));
                }
                for (Thread getter : getters) {
                    getter.join();
                }
                assertThat(refreshCount.get(), lessThanOrEqualTo(refreshCountBeforeGet + 1));
            }
        }
    }

    public void testRefreshDoesNotBlockClosing() throws Exception {
        final CountDownLatch refreshStarted = new CountDownLatch(1);
        final CountDownLatch engineClosed = new CountDownLatch(1);
        final ReferenceManager.RefreshListener refreshListener = new ReferenceManager.RefreshListener() {

            @Override
            public void beforeRefresh() {
                refreshStarted.countDown();
                try {
                    engineClosed.await();
                } catch (InterruptedException e) {
                    throw new AssertionError(e);
                }
            }

            @Override
            public void afterRefresh(boolean didRefresh) {
                assertFalse(didRefresh);
            }
        };
        try (Store store = createStore()) {
            final EngineConfig config = config(defaultSettings, store, createTempDir(), newMergePolicy(), null,
                refreshListener, null, null, engine.config().getCircuitBreakerService());
            try (InternalEngine engine = createEngine(config)) {
                if (randomBoolean()) {
                    engine.index(indexForDoc(createParsedDoc("id", null)));
                }
                threadPool.executor(ThreadPool.Names.REFRESH).execute(() ->
                    expectThrows(AlreadyClosedException.class,
                        () -> engine.refresh("test", randomFrom(Engine.SearcherScope.values()), true)));
                refreshStarted.await();
                engine.close();
                engineClosed.countDown();
            }
        }
    }

    public void testNotWarmUpSearcherInEngineCtor() throws Exception {
        try (Store store = createStore()) {
            List<ElasticsearchDirectoryReader> warmedUpReaders = new ArrayList<>();
            Engine.Warmer warmer = reader -> {
                assertNotNull(reader);
                assertThat(reader, not(in(warmedUpReaders)));
                warmedUpReaders.add(reader);
            };
            EngineConfig config = engine.config();
            final TranslogConfig translogConfig = new TranslogConfig(config.getTranslogConfig().getShardId(),
                createTempDir(), config.getTranslogConfig().getIndexSettings(), config.getTranslogConfig().getBigArrays());
            EngineConfig configWithWarmer = new EngineConfig(config.getShardId(), config.getThreadPool(),
                config.getIndexSettings(), warmer, store, config.getMergePolicy(), config.getAnalyzer(),
                config.getSimilarity(), new CodecService(null, logger), config.getEventListener(), config.getQueryCache(),
                config.getQueryCachingPolicy(), translogConfig, config.getFlushMergesAfter(),
                config.getExternalRefreshListener(), config.getInternalRefreshListener(), config.getIndexSort(),
                config.getCircuitBreakerService(), config.getGlobalCheckpointSupplier(), config.retentionLeasesSupplier(),
                config.getPrimaryTermSupplier(), config.getTombstoneDocSupplier(), config.getSnapshotCommitSupplier());
            try (InternalEngine engine = createEngine(configWithWarmer)) {
                assertThat(warmedUpReaders, empty());
                assertThat(expectThrows(Throwable.class, () -> engine.acquireSearcher("test")).getMessage(),
                    equalTo("searcher was not warmed up yet for source[test]"));
                int times = randomIntBetween(1, 10);
                for (int i = 0; i < times; i++) {
                    engine.refresh("test");
                }
                assertThat(warmedUpReaders, hasSize(1));
                try (Engine.Searcher internalSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                    try (Engine.Searcher externalSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                        assertSame(internalSearcher.getDirectoryReader(), externalSearcher.getDirectoryReader());
                        assertSame(warmedUpReaders.get(0), externalSearcher.getDirectoryReader());
                    }
                }
                index(engine, randomInt());
                if (randomBoolean()) {
                    engine.refresh("test", Engine.SearcherScope.INTERNAL, true);
                    assertThat(warmedUpReaders, hasSize(1));
                    try (Engine.Searcher internalSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                        try (Engine.Searcher externalSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                            assertNotSame(internalSearcher.getDirectoryReader(), externalSearcher.getDirectoryReader());
                        }
                    }
                }
                engine.refresh("test");
                assertThat(warmedUpReaders, hasSize(2));
                try (Engine.Searcher internalSearcher = engine.acquireSearcher("test", Engine.SearcherScope.INTERNAL)) {
                    try (Engine.Searcher externalSearcher = engine.acquireSearcher("test", Engine.SearcherScope.EXTERNAL)) {
                        assertSame(internalSearcher.getDirectoryReader(), externalSearcher.getDirectoryReader());
                        assertSame(warmedUpReaders.get(1), externalSearcher.getDirectoryReader());
                    }
                }
            }
        }
    }

    public void testProducesStoredFieldsReader() throws Exception {
        // Make sure that the engine produces a SequentialStoredFieldsLeafReader.
        // This is required for optimizations on SourceLookup to work, which is in-turn useful for runtime fields.
        ParsedDocument doc = testParsedDocument("1", null, testDocumentWithTextField("test"),
            new BytesArray("{}".getBytes(Charset.defaultCharset())), null);
        Engine.Index operation = randomBoolean() ?
            appendOnlyPrimary(doc, false, 1)
            : appendOnlyReplica(doc, false, 1, randomIntBetween(0, 5));
        engine.index(operation);
        engine.refresh("test");
        try (Engine.Searcher searcher = engine.acquireSearcher("test")) {
            IndexReader reader = searcher.getIndexReader();
            assertThat(reader.leaves().size(), Matchers.greaterThanOrEqualTo(1));
            for (LeafReaderContext context: reader.leaves()) {
                assertThat(context.reader(), Matchers.instanceOf(SequentialStoredFieldsLeafReader.class));
                SequentialStoredFieldsLeafReader lf = (SequentialStoredFieldsLeafReader) context.reader();
                assertNotNull(lf.getSequentialStoredFieldsReader());
            }
        }
    }

    public void testMaxDocsOnPrimary() throws Exception {
        engine.close();
        final boolean softDeleteEnabled = engine.config().getIndexSettings().isSoftDeleteEnabled();
        int maxDocs = randomIntBetween(1, 100);
        IndexWriterMaxDocsChanger.setMaxDocs(maxDocs);
        try {
            engine = new InternalTestEngine(engine.config(), maxDocs, LocalCheckpointTracker::new);
            int numDocs = between(maxDocs + 1, maxDocs * 2);
            List<Engine.Operation> operations = new ArrayList<>(numDocs);
            for (int i = 0; i < numDocs; i++) {
                final String id;
                if (softDeleteEnabled == false || randomBoolean()) {
                    id = Integer.toString(randomInt(numDocs));
                    operations.add(indexForDoc(createParsedDoc(id, null)));
                } else {
                    id = "not_found";
                    operations.add(new Engine.Delete("_doc", id, newUid(id), primaryTerm.get()));
                }
            }
            for (int i = 0; i < numDocs; i++) {
                final long maxSeqNo = engine.getLocalCheckpointTracker().getMaxSeqNo();
                final Engine.Result result = applyOperation(engine, operations.get(i));
                if (i < maxDocs) {
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.SUCCESS));
                    assertNull(result.getFailure());
                    assertThat(engine.getLocalCheckpointTracker().getMaxSeqNo(), equalTo(maxSeqNo + 1L));
                } else {
                    assertThat(result.getResultType(), equalTo(Engine.Result.Type.FAILURE));
                    assertNotNull(result.getFailure());
                    assertThat(result.getFailure().getMessage(),
                        containsString("Number of documents in the index can't exceed [" + maxDocs + "]"));
                    assertThat(result.getSeqNo(), equalTo(UNASSIGNED_SEQ_NO));
                    assertThat(engine.getLocalCheckpointTracker().getMaxSeqNo(), equalTo(maxSeqNo));
                }
                assertFalse(engine.isClosed.get());
            }
        } finally {
            IndexWriterMaxDocsChanger.restoreMaxDocs();
        }
    }

    public void testMaxDocsOnReplica() throws Exception {
        assumeTrue("Deletes do not add documents to Lucene with soft-deletes disabled",
            engine.config().getIndexSettings().isSoftDeleteEnabled());
        engine.close();
        int maxDocs = randomIntBetween(1, 100);
        IndexWriterMaxDocsChanger.setMaxDocs(maxDocs);
        try {
            engine = new InternalTestEngine(engine.config(), maxDocs, LocalCheckpointTracker::new);
            int numDocs = between(maxDocs + 1, maxDocs * 2);
            List<Engine.Operation> operations = generateHistoryOnReplica(numDocs, randomBoolean(), randomBoolean(), randomBoolean());
            final IllegalArgumentException error = expectThrows(IllegalArgumentException.class, () -> {
                for (Engine.Operation op : operations) {
                    applyOperation(engine, op);
                }
            });
            assertThat(error.getMessage(), containsString("number of documents in the index cannot exceed " + maxDocs));
            assertTrue(engine.isClosed.get());
        } finally {
            IndexWriterMaxDocsChanger.restoreMaxDocs();
        }
    }
}
