Showing 1–23 of 23 results for author: Ji, F

Engram-E2VID: Reference-Based Event-to-Video Reconstruction via Generative Activation of Appearance Engrams

Authors: Feiyu Ji, Xiang Li, Hao Ma, Tianxiang Huang, Qingxin Lu, Mengqi Ji, Lei Han, Xiaokang Yang, Xiaoyun Yuan

Abstract: Reference-based event-to-video reconstruction aims to recover target RGB frames from a reference frame and the event stream captured over the reference-to-target interval. Although events provide fine-grained temporal cues, they encode sparse and asynchronous log-intensity changes rather than absolute appearance, making faithful reconstruction intrinsically challenging. The central challenge lies… ▽ More Reference-based event-to-video reconstruction aims to recover target RGB frames from a reference frame and the event stream captured over the reference-to-target interval. Although events provide fine-grained temporal cues, they encode sparse and asynchronous log-intensity changes rather than absolute appearance, making faithful reconstruction intrinsically challenging. The central challenge lies in associating event-derived target-time structures with relevant appearance information from the reference frame, especially under complex motion and long temporal intervals. In this work, we propose Engram-E2VID, a structure-guided framework that reconstructs target frames through the generative activation of appearance engrams. Specifically, the reference frame is encoded into token-space appearance engrams, while the event stream and reference context are transformed into a target-time motion-structure scaffold that captures motion boundaries and event-induced structural changes. Within a one-step diffusion backbone, scaffold-derived structural tokens progressively interact with and activate relevant appearance engrams across layers. This token-space association allows target structures to access reference appearance without relying on direct pixel-wise correspondence, while the diffusion prior complements uncertain or newly revealed regions. Across three benchmarks, Engram-E2VID improves PSNR by up to 3.29 dB and reduces LPIPS by up to 0.08 over the strongest same-input baseline, while degrading more slowly as the reconstruction interval increases. △ Less

Submitted 6 August, 2026; originally announced August 2026.

Comments: 9 pages, 5 figures

Characterize localization length of disordered lattices via critical coupling effect

Authors: Fuhao Ji, Xiangqi Huang, Luxing Chen, Yuxiang Tian, Wenjing Li, Yinying Peng, Yuge Qiu, Lu Zhang, Liwei Zhang, Mingfang Yi, Peilong Hong

Abstract: Light localization by scattering is a fundamental mechanism driving phase transitions of wave transport in disordered systems. Characterizing the localization length in scattering systems is crucial yet challenging. In this Letter, we demonstrate a spatially matched coupling scheme using wavefront shaping to resolve the intrinsic localization length in two-dimensional disordered lattices. By tailo… ▽ More Light localization by scattering is a fundamental mechanism driving phase transitions of wave transport in disordered systems. Characterizing the localization length in scattering systems is crucial yet challenging. In this Letter, we demonstrate a spatially matched coupling scheme using wavefront shaping to resolve the intrinsic localization length in two-dimensional disordered lattices. By tailoring the incident wavefront, our method facilitates efficient coupling of light to the minimum localized mode. We apply this approach to measure two different self-assembled lattices, and report the first observation of the critical coupling effect, which allows for the direct determination of the characteristic size of minimum localized mode. Our results reveal that for a fixed lattice periodicity, increasing the air-hole diameter significantly reduces this intrinsic localization length. This far-field metrology offers a robust framework for probing wave localization in complex media, which should be useful in various applications such as random lasing and nonlinear optics △ Less

Submitted 4 April, 2026; originally announced April 2026.

Comments: 5 pages, 5 figures

MSC Class: 78-05

Simultaneous existence of the ocsillations, counterstreaming flows and mass injections in solar quiescent prominences

Authors: X. L. Yan, Z. K. Xue, J. C. Wang, P. F. Chen, K. F. Ji, C. Xia, L. H. Yang, D. F. Kong, Z. Xu, Y. A. Zhou, Q. L. Li

Abstract: Solar prominences are very spectacular structures embedded in the tenuous and hot solar corona. The counterstreaming flows, a common feature in solar quiescent prominences, have been discovered for more than twenty years. However, the mechanism driving the counterstreaming flows is still elusive. To unveil the nature of this phenomenon, we analyzed the data of a quiescent prominence observed by th… ▽ More Solar prominences are very spectacular structures embedded in the tenuous and hot solar corona. The counterstreaming flows, a common feature in solar quiescent prominences, have been discovered for more than twenty years. However, the mechanism driving the counterstreaming flows is still elusive. To unveil the nature of this phenomenon, we analyzed the data of a quiescent prominence observed by the New Vacuum Solar Telescope (NVST), the Interface Region Imaging Spectrograph (IRIS), and the Solar Dynamical Observatory (SDO). It is found that there is a distinct longitudinal oscillation of prominence plasma along the higher part of the prominence spine in H$α$ observations. The oscillation period is approximately 83 minutes and the amplitude is about 32 Mm. The counterstreaming flows are dominant in the middle part of the prominence spine. The velocities of the counterstreaming flows range from about 4 km s$^{-1}$ to 11 km s$^{-1}$. Moreover, the intermittent mass flows with the upward plumes from the top of the bubbles and tornado-like barbs are observed to be injected into the lower part of the prominence spine from the lower atmosphere. The velocities of these injected mass flows range from about 3 km s$^{-1}$ to 30 km s$^{-1}$. Some injected mass flows exhibit redshifted Doppler signals, while others exhibit blueshifted signals. Based on these high resolution observations, it is found that different parts of the prominence spine exhibit the different dynamic characteristics. These results further advance the understanding of the ubiquitous counterstreaming flows in solar quiescent prominences. △ Less

Submitted 6 February, 2025; originally announced February 2025.

Comments: 14 pages, 7 figures, accepted for publication in ApJ

The hidden magnetic structures of a solar intermediate filament revealed by the injected flare material

Authors: X. L. Yan, Z. K. Xue, J. C. Wang, L. H. Yang, K. F. Ji, D. F. Kong, Z. Xu, Q. L. Li, L. P. Yang, X. S. Zhang

Abstract: Solar filaments are spectacular objects in the solar atmosphere, consisting of accumulations of cool, dense, and partially ionized plasma suspended in the hot solar corona against gravity. The magnetic structures that support the filament material remain elusive, partly due to the lack of high resolution magnetic field measurements in the chromosphere and corona. In this study, we reconstruct the… ▽ More Solar filaments are spectacular objects in the solar atmosphere, consisting of accumulations of cool, dense, and partially ionized plasma suspended in the hot solar corona against gravity. The magnetic structures that support the filament material remain elusive, partly due to the lack of high resolution magnetic field measurements in the chromosphere and corona. In this study, we reconstruct the magnetic structures of a solar intermediate filament using EUV observations and two different methods, to follow the injection of hot material from a B-class solar flare. Our analysis reveals the fine-scale magnetic structures of the filament, including a compact set of mutually wrapped magnetic fields encasing the cool filament material, two groups of helical magnetic structures intertwining with the main filament, and a series of arched magnetic loops positioned along the filament. Additionally, we also find that the northern footpoints of the helical structures are rooted in the same location, while their southern footpoints are rooted in different areas. The results obtained in this study offer new insights into the formation and eruption mechanisms of solar filaments. △ Less

Submitted 2 December, 2024; originally announced December 2024.

Comments: 23 pages, 13 figures, accepted for publication in ApJ

Calculation of RF-induced Temporal Jitter in Ultrafast Electron Diffraction

Authors: Tianzhe Xu, Fuhao Ji, Stephen Weathersby, Robert Joel England

Abstract: A significant contribution to the temporal resolution of an ultrafast electron diffraction (UED) instrument is arrival time jitter caused by amplitude and phase variation of radio frequency (RF) cavities. In this paper, we present a semi-analytical approach for calculating RF-induced temporal jitter from klystron and RF cavity parameters. Our approach allows fast estimation of temporal jitter for… ▽ More A significant contribution to the temporal resolution of an ultrafast electron diffraction (UED) instrument is arrival time jitter caused by amplitude and phase variation of radio frequency (RF) cavities. In this paper, we present a semi-analytical approach for calculating RF-induced temporal jitter from klystron and RF cavity parameters. Our approach allows fast estimation of temporal jitter for MeV-UED beamlines and can serve as a virtual timing tool when shot-to-shot measurements of RF amplitude and phase jitters are available. A simulation study for the SLAC MeV-UED instrument is presented and the temporal resolution for several beamline configurations are compared. △ Less

Submitted 15 August, 2024; v1 submitted 1 August, 2024; originally announced August 2024.

Comments: 8 pages, 5 figures

Multi-Objective Bayesian Active Learning for MeV-ultrafast electron diffraction

Authors: Fuhao Ji, Auralee Edelen, Ryan Roussel, Xiaozhe Shen, Sara Miskovich, Stephen Weathersby, Duan Luo, Mianzhen Mo, Patrick Kramer, Christopher Mayes, Mohamed A. K. Othman, Emilio Nanni, Xijie Wang, Alexander Reid, Michael Minitti, Robert Joel England

Abstract: Ultrafast electron diffraction using MeV energy beams(MeV-UED) has enabled unprecedented scientific opportunities in the study of ultrafast structural dynamics in a variety of gas, liquid and solid state systems. Broad scientific applications usually pose different requirements for electron probe properties. Due to the complex, nonlinear and correlated nature of accelerator systems, electron beam… ▽ More Ultrafast electron diffraction using MeV energy beams(MeV-UED) has enabled unprecedented scientific opportunities in the study of ultrafast structural dynamics in a variety of gas, liquid and solid state systems. Broad scientific applications usually pose different requirements for electron probe properties. Due to the complex, nonlinear and correlated nature of accelerator systems, electron beam property optimization is a time-taking process and often relies on extensive hand-tuning by experienced human operators. Algorithm based efficient online tuning strategies are highly desired. Here, we demonstrate multi-objective Bayesian active learning for speeding up online beam tuning at the SLAC MeV-UED facility. The multi-objective Bayesian optimization algorithm was used for efficiently searching the parameter space and mapping out the Pareto Fronts which give the trade-offs between key beam properties. Such scheme enables an unprecedented overview of the global behavior of the experimental system and takes a significantly smaller number of measurements compared with traditional methods such as a grid scan. This methodology can be applied in other experimental scenarios that require simultaneously optimizing multiple objectives by explorations in high dimensional, nonlinear and correlated systems. △ Less

Submitted 3 May, 2024; v1 submitted 2 April, 2024; originally announced April 2024.

Journal ref: Nat Commun 15, 4726 (2024)

Bayesian Optimization Algorithms for Accelerator Physics

Authors: Ryan Roussel, Auralee L. Edelen, Tobias Boltz, Dylan Kennedy, Zhe Zhang, Fuhao Ji, Xiaobiao Huang, Daniel Ratner, Andrea Santamaria Garcia, Chenran Xu, Jan Kaiser, Angel Ferran Pousa, Annika Eichler, Jannis O. Lubsen, Natalie M. Isenberg, Yuan Gao, Nikita Kuklev, Jose Martinez, Brahim Mustapha, Verena Kain, Weijian Lin, Simone Maria Liuzzo, Jason St. John, Matthew J. V. Streeter, Remi Lehe , et al. (1 additional authors not shown)

Abstract: Accelerator physics relies on numerical algorithms to solve optimization problems in online accelerator control and tasks such as experimental design and model calibration in simulations. The effectiveness of optimization algorithms in discovering ideal solutions for complex challenges with limited resources often determines the problem complexity these methods can address. The accelerator physics… ▽ More Accelerator physics relies on numerical algorithms to solve optimization problems in online accelerator control and tasks such as experimental design and model calibration in simulations. The effectiveness of optimization algorithms in discovering ideal solutions for complex challenges with limited resources often determines the problem complexity these methods can address. The accelerator physics community has recognized the advantages of Bayesian optimization algorithms, which leverage statistical surrogate models of objective functions to effectively address complex optimization challenges, especially in the presence of noise during accelerator operation and in resource-intensive physics simulations. In this review article, we offer a conceptual overview of applying Bayesian optimization techniques towards solving optimization problems in accelerator physics. We begin by providing a straightforward explanation of the essential components that make up Bayesian optimization techniques. We then give an overview of current and previous work applying and modifying these techniques to solve accelerator physics challenges. Finally, we explore practical implementation strategies for Bayesian optimization algorithms to maximize their performance, enabling users to effectively address complex optimization challenges in real-time beam control and accelerator design. △ Less

Submitted 5 April, 2024; v1 submitted 9 December, 2023; originally announced December 2023.

Relativistic ultrafast electron diffraction at high repetition rates

Authors: K. M. Siddiqui, D. B. Durham, F. Cropp, F. Ji, S. Paiagua, C. Ophus, N. C. Andresen, L. Jin, J. Wu, S. Wang, X. Zhang, W. You, M. Murnane, M. Centurion, X. Wang, D. S. Slaughter, R. A. Kaindl, P. Musumeci, A. M. Minor, D. Filippetto

Abstract: The ability to resolve the dynamics of matter on its native temporal and spatial scales constitutes a key challenge and convergent theme across chemistry, biology, and materials science. The last couple of decades have witnessed ultrafast electron diffraction (UED) emerge as one of the forefront techniques with the sensitivity to resolve atomic motions. Increasingly sophisticated UED instruments a… ▽ More The ability to resolve the dynamics of matter on its native temporal and spatial scales constitutes a key challenge and convergent theme across chemistry, biology, and materials science. The last couple of decades have witnessed ultrafast electron diffraction (UED) emerge as one of the forefront techniques with the sensitivity to resolve atomic motions. Increasingly sophisticated UED instruments are being developed that are aimed at increasing the beam brightness in order to observe structural signatures, but so far they have been limited to low average current beams. Here we present the technical design and capabilities of the HiRES (High Repetition Rate Electron Scattering) instrument, which blends relativistic electrons and high repetition rates to achieve orders of magnitude improvement in average beam current compared to the existing state-of-the-art UED instruments. The setup utilizes a novel electron source to deliver femtosecond duration electron pulses at up to MHz repetition rates for UED experiments. We provide example cases of diffraction measurements on solid-state and gas-phase samples, including both micro- and nanodiffraction modes, which showcase the potential of the instrument for novel UED experiments. △ Less

Submitted 7 June, 2023; originally announced June 2023.

Comments: 13 pages, 10 figures

Journal ref: Struct. Dyn. 10, 064302 (2023)

Femtosecond electronic and hydrogen structural dynamics in ammonia imaged with ultrafast electron diffraction

Authors: Elio G. Champenois, Nanna H. List, Matthew Ware, Mathew Britton, Philip H. Bucksbaum, Xinxin Cheng, Martin Centurion, James P. Cryan, Ruaridh Forbes, Ian Gabalski, Kareem Hegazy, Matthias C. Hoffmann, Andrew J. Howard, Fuhao Ji, Ming-Fu Lin, J. Pedro Nunes, Xiaozhe Shen, Jie Yang, Xijie Wang, Todd J. Martinez, Thomas J. A. Wolf

Abstract: Directly imaging structural dynamics involving hydrogen atoms by ultrafast diffraction methods is complicated by their low scattering cross-sections. Here we demonstrate that megaelectronvolt ultrafast electron diffraction is sufficiently sensitive to follow hydrogen dynamics in isolated molecules. In a study of the photodissociation of gas phase ammonia, we simultaneously observe signatures of th… ▽ More Directly imaging structural dynamics involving hydrogen atoms by ultrafast diffraction methods is complicated by their low scattering cross-sections. Here we demonstrate that megaelectronvolt ultrafast electron diffraction is sufficiently sensitive to follow hydrogen dynamics in isolated molecules. In a study of the photodissociation of gas phase ammonia, we simultaneously observe signatures of the nuclear and corresponding electronic structure changes resulting from the dissociation dynamics in the time-dependent diffraction. Both assignments are confirmed by ab initio simulations of the photochemical dynamics and the resulting diffraction observable. While the temporal resolution of the experiment is insufficient to resolve the dissociation in time, our results represent an important step towards the observation of proton dynamics in real space and time. △ Less

Submitted 6 March, 2023; originally announced March 2023.

Rehybridization dynamics into the pericyclic minimum of an electrcyclic reaction imaged in real-time

Authors: Yusong Liu, David M. Sanchez, Matthew R. Ware, Elio G. Champenois, Jie Yang, J. Pedro F. Nunes, Andrew Attar, Martin Centurion, James P. Cryan, Ruaridh G. Forbes, Kareem Hegazy, Matthias C. Hoffmann, Fuhao Ji, Ming-Fu Lin, Duan Luo, Sajib K. Saha, Xiaozhe Shen, Xijie Wang, Todd J. Martínez, Thomas J. A. Wolf

Abstract: Electrocyclic reactions are characterized by the concerted formation and cleavage of both σ and π bonds through a cyclic structure. This structure is known as a pericyclic transition state for thermal reactions and a pericyclic minimum in the excited state for photochemical reactions. However, the structure of the pericyclic geometry has yet to be observed experimentally. We use a combination of u… ▽ More Electrocyclic reactions are characterized by the concerted formation and cleavage of both σ and π bonds through a cyclic structure. This structure is known as a pericyclic transition state for thermal reactions and a pericyclic minimum in the excited state for photochemical reactions. However, the structure of the pericyclic geometry has yet to be observed experimentally. We use a combination of ultrafast electron diffraction and excited state wavepacket simulations to image structural dynamics through the pericyclic minimum of a photochemical electrocyclic ring-opening reaction in the molecule α-terpinene. The structural motion into the pericyclic minimum is dominated by rehybridization of two carbon atoms, which is required for the transformation from two to three conjugated π bonds. The σ bond dissociation largely happens after internal conversion from the pericyclic minimum to the electronic ground state. These findings may be transferrable to electrocyclic reactions in general. △ Less

Submitted 27 September, 2022; originally announced September 2022.

Comments: Combined manuscript and supplementary information

OpenKBP-Opt: An international and reproducible evaluation of 76 knowledge-based planning pipelines

Authors: Aaron Babier, Rafid Mahmood, Binghao Zhang, Victor G. L. Alves, Ana Maria Barragán-Montero, Joel Beaudry, Carlos E. Cardenas, Yankui Chang, Zijie Chen, Jaehee Chun, Kelly Diaz, Harold David Eraso, Erik Faustmann, Sibaji Gaj, Skylar Gay, Mary Gronberg, Bingqi Guo, Junjun He, Gerd Heilemann, Sanchit Hira, Yuliang Huang, Fuxin Ji, Dashan Jiang, Jean Carlo Jimenez Giraldo, Hoyeon Lee , et al. (34 additional authors not shown)

Abstract: We establish an open framework for developing plan optimization models for knowledge-based planning (KBP) in radiotherapy. Our framework includes reference plans for 100 patients with head-and-neck cancer and high-quality dose predictions from 19 KBP models that were developed by different research groups during the OpenKBP Grand Challenge. The dose predictions were input to four optimization mode… ▽ More We establish an open framework for developing plan optimization models for knowledge-based planning (KBP) in radiotherapy. Our framework includes reference plans for 100 patients with head-and-neck cancer and high-quality dose predictions from 19 KBP models that were developed by different research groups during the OpenKBP Grand Challenge. The dose predictions were input to four optimization models to form 76 unique KBP pipelines that generated 7600 plans. The predictions and plans were compared to the reference plans via: dose score, which is the average mean absolute voxel-by-voxel difference in dose a model achieved; the deviation in dose-volume histogram (DVH) criterion; and the frequency of clinical planning criteria satisfaction. We also performed a theoretical investigation to justify our dose mimicking models. The range in rank order correlation of the dose score between predictions and their KBP pipelines was 0.50 to 0.62, which indicates that the quality of the predictions is generally positively correlated with the quality of the plans. Additionally, compared to the input predictions, the KBP-generated plans performed significantly better (P<0.05; one-sided Wilcoxon test) on 18 of 23 DVH criteria. Similarly, each optimization model generated plans that satisfied a higher percentage of criteria than the reference plans. Lastly, our theoretical investigation demonstrated that the dose mimicking models generated plans that are also optimal for a conventional planning model. This was the largest international effort to date for evaluating the combination of KBP prediction and optimization models. In the interest of reproducibility, our data and code is freely available at https://github.com/ababier/open-kbp-opt. △ Less

Submitted 16 February, 2022; originally announced February 2022.

Comments: 19 pages, 7 tables, 6 figures

Conformer-specific Chemistry Imaged in Real Space and Time

Authors: E. G. Champenois, D. M. Sanchez, J. Yang, J. P. F. Nunes, A. Attar, M. Centurion, R. Forbes, M. Gühr, K. Hegazy, F. Ji, S. K. Saha, Y. Liu, M. -F. Lin, D. Luo, B. Moore, X. Shen, M. R. Ware, X. J. Wang, T. J. Martínez, T. J. A. Wolf

Abstract: Conformational isomers or conformers of molecules play a decisive role in chemistry and biology. However, experimental methods to investigate chemical reaction dynamics are typically not conformer-sensitive. Here, we report on a gas-phase megaelectronvolt ultrafast electron diffraction investigation of α-phellandrene undergoing an electrocyclic ring-opening reaction. We directly image the evolutio… ▽ More Conformational isomers or conformers of molecules play a decisive role in chemistry and biology. However, experimental methods to investigate chemical reaction dynamics are typically not conformer-sensitive. Here, we report on a gas-phase megaelectronvolt ultrafast electron diffraction investigation of α-phellandrene undergoing an electrocyclic ring-opening reaction. We directly image the evolution of a specific set of α-phellandrene conformers into the product isomer predicted by the Woodward-Hoffmann rules in real space and time. Our experimental results are in quantitative agreement with nonadiabatic quantum molecular dynamics simulations, which provide unprecedented detail of how conformation influences time scale and quantum efficiency of photoinduced ring-opening reactions. Due to the prevalence of large numbers of conformers in organic chemistry, our findings impact our general understanding of reaction dynamics in chemistry and biology. △ Less

Submitted 8 July, 2021; originally announced July 2021.

Visualizing femtosecond dynamics with ultrafast electron probes through terahertz compression and time-stamping

Authors: Mohamed A. K. Othman, Emma C. Snively, Annika E. Gabriel, Michael E. Kozina, Xiaozhe Shen, Fuaho Ji, Samantha Lewis, Stephen Weathersby, Duan Luo, Xijie Wang, Matthias C. Hoffmann, Emilio A. Nanni

Abstract: Visualizing ultrafast dynamics at the atomic scale requires time-resolved pump-probe characterization with femtosecond temporal resolution. For single-shot ultrafast electron diffraction (UED) with fully relativistic electron bunch probes, existing techniques are limited by the achievable electron probe bunch length, charge, and timing jitter. We present the first experimental demonstration of pum… ▽ More Visualizing ultrafast dynamics at the atomic scale requires time-resolved pump-probe characterization with femtosecond temporal resolution. For single-shot ultrafast electron diffraction (UED) with fully relativistic electron bunch probes, existing techniques are limited by the achievable electron probe bunch length, charge, and timing jitter. We present the first experimental demonstration of pump-probe UED with THz-driven compression and time-stamping that enable UED probes with unprecedented temporal resolution. This technique utilizes two counter-propagating quasi-single-cycle THz pulses generated from two OH-1 organic crystals coupled into an optimized THz compressor structure. Ultrafast dynamics of photoexcited bismuth films show an improved temporal resolution from 178 fs down to 85 fs when the THz-compressed UED probes are used with no time-stamping correction. Furthermore, we use a novel time-stamping technique to reveal transient oscillations in the dynamical response of THz-excited single-crystal gold films previously inaccessible by standard UED, achieving a time-stamped temporal resolution down to 5 fs. △ Less

Submitted 12 April, 2021; originally announced April 2021.

Comments: 13 pages, 5 figures

Construction and On-site Performance of the LHAASO WFCTA Camera

Authors: F. Aharonian, Q. An, Axikegu, L. X. Bai, Y. X. Bai, Y. W. Bao, D. Bastieri, X. J. Bi, Y. J. Bi, H. Cai, J. T. Cai, Z. Cao, Z. Cao, J. Chang, J. F. Chang, X. C. Chang, B. M. Chen, J. Chen, L. Chen, L. Chen, L. Chen, M. J. Chen, M. L. Chen, Q. H. Chen, S. H. Chen , et al. (234 additional authors not shown)

Abstract: The focal plane camera is the core component of the Wide Field-of-view Cherenkov/fluorescence Telescope Array (WFCTA) of the Large High-Altitude Air Shower Observatory (LHAASO). Because of the capability of working under moonlight without aging, silicon photomultipliers (SiPM) have been proven to be not only an alternative but also an improvement to conventional photomultiplier tubes (PMT) in this… ▽ More The focal plane camera is the core component of the Wide Field-of-view Cherenkov/fluorescence Telescope Array (WFCTA) of the Large High-Altitude Air Shower Observatory (LHAASO). Because of the capability of working under moonlight without aging, silicon photomultipliers (SiPM) have been proven to be not only an alternative but also an improvement to conventional photomultiplier tubes (PMT) in this application. Eighteen SiPM-based cameras with square light funnels have been built for WFCTA. The telescopes have collected more than 100 million cosmic ray events and preliminary results indicate that these cameras are capable of working under moonlight. The characteristics of the light funnels and SiPMs pose challenges (e.g. dynamic range, dark count rate, assembly techniques). In this paper, we present the design features, manufacturing techniques and performances of these cameras. Finally, the test facilities, the test methods and results of SiPMs in the cameras are reported here. △ Less

Submitted 4 July, 2021; v1 submitted 29 December, 2020; originally announced December 2020.

Comments: 45 pages, 21 figures, article

Journal ref: Eur. Phys. J. C 81, 657 (2021)

Knife-edge based measurement of the 4D transverse phase space of electron beams with picometer-scale emittance

Authors: Fuhao Ji, Jorge Giner Navarro, Pietro Musumeci, Daniel Durham, Andrew Minor, Daniele Filippetto

Abstract: Precise manipulation of high brightness electron beams requires detailed knowledge of the particle phase space shape and evolution. As ultrafast electron pulses become brighter, new operational regimes become accessible with emittance values in the picometer range, with enormous impact on potential scientific applications. Here we present a new characterization method for such beams and demonstrat… ▽ More Precise manipulation of high brightness electron beams requires detailed knowledge of the particle phase space shape and evolution. As ultrafast electron pulses become brighter, new operational regimes become accessible with emittance values in the picometer range, with enormous impact on potential scientific applications. Here we present a new characterization method for such beams and demonstrate experimentally its ability to reconstruct the 4D transverse beam matrix of strongly correlated electron beams with sub-nanometer emittance and sub-micrometer spot size, produced with the HiRES beamline at LBNL. Our work extends the reach of ultrafast electron accelerator diagnostics into picometer-range emittance values, opening the way to complex nanometer-scale electron beam manipulation techniques. △ Less

Submitted 29 March, 2019; originally announced March 2019.

Journal ref: Phys. Rev. Accel. Beams 22, 082801 (2019)

Ultrafast Relativistic Electron Nanoprobes

Authors: Fu-Hao Ji, Daniel Durham, Andrew Minor, Pietro Musumeci, Jorge Navarro, Daniele Filippetto

Abstract: One of the frontiers in electron scattering is to couple ultrafast temporal resolution with highly localized probes to investigate the role of microstructure on material properties. Here, taking advantage of the unprecedented average brightness of the APEX electron gun providing relativistic electron pulses at high repetition rates, we demonstrate for the first time the generation of ultrafast rel… ▽ More One of the frontiers in electron scattering is to couple ultrafast temporal resolution with highly localized probes to investigate the role of microstructure on material properties. Here, taking advantage of the unprecedented average brightness of the APEX electron gun providing relativistic electron pulses at high repetition rates, we demonstrate for the first time the generation of ultrafast relativistic electron beams with picometer-scale emittance and their ability to probe nanoscale features on materials with complex microstructures. At the sample plane, the APEX beam is tightly focused by a custom in-vacuum lens system based on permanent magnet quadrupoles, and its evolution around the waist is tracked by a knife-edge technique, allowing accurate reconstruction of the beam shape and local density. We then use the focused beam to characterize a Ti-6 wt\% Al polycrystalline sample by correlating the diffraction and imaging modality, showcasing the capability to locate grain boundaries and map adjacent crystallographic domains with sub-micron precision. This work provides a new paradigm for ultrafast electron instrumentation, demonstrating the ability to generate relativistic beams with ultrasmall transverse phase space volumes enabling novel characterization techniques such as relativistic ultrafast electron nano-diffraction and ultrafast scanning transmission electron microscopy. △ Less

Submitted 10 January, 2019; originally announced January 2019.

Estimating Infection Sources in Networks Using Partial Timestamps

Authors: Wenchang Tang, Feng Ji, Wee Peng Tay

Abstract: We study the problem of identifying infection sources in a network based on the network topology, and a subset of infection timestamps. In the case of a single infection source in a tree network, we derive the maximum likelihood estimator of the source and the unknown diffusion parameters. We then introduce a new heuristic involving an optimization over a parametrized family of Gromov matrices to… ▽ More We study the problem of identifying infection sources in a network based on the network topology, and a subset of infection timestamps. In the case of a single infection source in a tree network, we derive the maximum likelihood estimator of the source and the unknown diffusion parameters. We then introduce a new heuristic involving an optimization over a parametrized family of Gromov matrices to develop a single source estimation algorithm for general graphs. Compared with the breadth-first search tree heuristic commonly adopted in the literature, simulations demonstrate that our approach achieves better estimation accuracy than several other benchmark algorithms, even though these require more information like the diffusion parameters. We next develop a multiple sources estimation algorithm for general graphs, which first partitions the graph into source candidate clusters, and then applies our single source estimation algorithm to each cluster. We show that if the graph is a tree, then each source candidate cluster contains at least one source. Simulations using synthetic and real networks, and experiments using real-world data suggest that our proposed algorithms are able to estimate the true infection source(s) to within a small number of hops with a small portion of the infection timestamps being observed. △ Less

Submitted 4 March, 2019; v1 submitted 5 November, 2017; originally announced November 2017.

Comments: 15 pages, 15 figures, accepted by IEEE Transactions on Information Forensics and Security

Journal ref: IEEE Trans. Inf. Forensics Security, vol. 13, no. 2, pp. 3035-3049, Dec. 2018

Observations of kinetic-size magnetic holes in the magnetosheath

Authors: S. T. Yao, X. G. Wang, Q. Q. Shi, T. Pitkänen, M. Hamrin, Z. H. Yao, Z. Y. Li, X. F. Ji, A. De Spiegeleer, Y. C. Xiao, A. M. Tian, Z. Y. Pu, Q. G. Zong, C. J. Xiao, S. Y. Fu, H. Zhang, C. T. Russell, B. L. Giles, R. L. Guo, W. J. Sun, W. Y. Li, X. Z. Zhou, S. Y. Huang, J. Vaverka, M. Nowada , et al. (3 additional authors not shown)

Abstract: Magnetic holes (MHs), with a scale much greater than \r{ho}i (proton gyroradius), have been widely reported in various regions of space plasmas. On the other hand, kinetic-size magnetic holes (KSMHs), previously called small size magnetic holes (SSMHs), with a scale of the order of magnitude of or less than \r{ho}i have only been reported in the Earth's magnetospheric plasma sheet. In this study,… ▽ More Magnetic holes (MHs), with a scale much greater than \r{ho}i (proton gyroradius), have been widely reported in various regions of space plasmas. On the other hand, kinetic-size magnetic holes (KSMHs), previously called small size magnetic holes (SSMHs), with a scale of the order of magnitude of or less than \r{ho}i have only been reported in the Earth's magnetospheric plasma sheet. In this study, we report such KSMHs in the magnetosheath whereby we use measurements from the Magnetospheric Multiscale (MMS) mission, which provides three-dimensional (3D) particle distribution measurements with a resolution much higher than previous missions. The MHs have been observed in a scale of 10 ~ 20 \r{ho}e (electron gyroradii) and lasted 0.1 ~ 0.3 s. Distinctive electron dynamics features are observed, while no substantial deviations in ion data are seen. It is found that at the 90° pitch angle, the flux of electrons with energy 34 ~ 66 eV decreased while for electrons of energy 109 ~ 1024 eV increased inside the MHs. We also find the electron flow vortex perpendicular to the magnetic field, a feature self-consistent with the magnetic depression. Moreover, the calculated current density is mainly contributed by the electron diamagnetic drift, and the electron vortex flow is the diamagnetic drift flow. The electron magnetohydrodynamics (EMHD) soliton is considered as a possible generation mechanism for the KSMHs with the scale size of 10 ~ 20 \r{ho}e. △ Less

Submitted 27 January, 2017; v1 submitted 7 January, 2017; originally announced January 2017.

Comments: The paper need to be removed as some data is not corrected

Optimization of the collimation system for CSNS/RCS with the robust conjugate direction search algorithm

Authors: H. F. Ji, Y. Jiao, M. Y. Huang, S. Y. Xu, N. Wang, S. Wang

Abstract: The Robust Conjugate Direction Search (RCDS) method is used to optimize the collimation system for Rapid Cycling Synchrotron (RCS) of the Chinese Spallation Neutron Source (CSNS). The parameters of secondary collimators are optimized for a better performance of the collimation system. To improve the efficiency of the optimization, the Objective Ring Beam Injection and Tracking (ORBIT) parallel mod… ▽ More The Robust Conjugate Direction Search (RCDS) method is used to optimize the collimation system for Rapid Cycling Synchrotron (RCS) of the Chinese Spallation Neutron Source (CSNS). The parameters of secondary collimators are optimized for a better performance of the collimation system. To improve the efficiency of the optimization, the Objective Ring Beam Injection and Tracking (ORBIT) parallel module combined with MATLAB parallel computing is used, which can run multiple ORBIT instances simultaneously. This study presents a way to figure out an optimal parameter combination of the secondary collimators for a machine model in preparation for CSNS/RCS commissioning. △ Less

Submitted 24 August, 2016; v1 submitted 29 March, 2016; originally announced March 2016.

Comments: Chinese Physics C Vol. 40, No. 9 (2016)

Photon-phonon parametric oscillation induced by the quadratic coupling in an optomechanical resonator

Authors: Lin Zhang, Fengzhou Ji, Xu Zhang, Weiping Zhang

Abstract: A direct photon-phonon parametric effect of the quadratic coupling on the mean-field dynamics of an optomechanical resonator in the large-scale-movement regime is found and investigated. Under a weak pumping power, the mechanical resonator damps to steady state with a nonlinear static response sensitively modified by the quadratic coupling. When the driving powerincreases beyond the static energy… ▽ More A direct photon-phonon parametric effect of the quadratic coupling on the mean-field dynamics of an optomechanical resonator in the large-scale-movement regime is found and investigated. Under a weak pumping power, the mechanical resonator damps to steady state with a nonlinear static response sensitively modified by the quadratic coupling. When the driving powerincreases beyond the static energy balance, the steady states lose their stabilities via Hopf bifurcations and the resonator produces stable self-sustained oscillation(limit-circle behavior) of discrete energies with step-like amplitudes due to the parametric effect of the quadratic coupling, which can be understood roughly by the power balance between gain and loss on the resonator. A further increase of the pumping power can induce chaotic dynamic of the resonator via a typical routine of period-doubling bifurcation but which can be stabilized by the parametric effect through an inversion bifurcation process back to limit-circle states. The bifurcation-to-inverse-bifurcation transitions are numerically verified by the maximal Lyapunov exponents of the dynamics and which indicate an efficient way to suppress the chaotic behavior of the optomechanical resonator by the quadratic coupling. Furthermore, the parametric effect of the quadratic coupling on the dynamic transitions of an optomechanical resonator can be conveniently detected or traced by the output power spectrum of the cavity field. △ Less

Submitted 7 May, 2017; v1 submitted 6 February, 2016; originally announced February 2016.

Comments: 12 pages, 10 figures, submitted to JOPB

The design of a multi-channel spin polarimeter

Authors: Tan Shi, Fuhao Ji, Mao Ye, Weishi Wan, Shan Qiao

Abstract: All commercial electron spin polarimeters work in single channel mode, which is the bottleneck of researches by spin-resolved photoelectron spectroscopy. By adopting the time inversion antisymmetry of magnetic field, we developed a multichannel spin polarimeter based on normal incident VLEED. The key point to achieve the multi-channel measurements is the spatial resolution of the electron optics.… ▽ More All commercial electron spin polarimeters work in single channel mode, which is the bottleneck of researches by spin-resolved photoelectron spectroscopy. By adopting the time inversion antisymmetry of magnetic field, we developed a multichannel spin polarimeter based on normal incident VLEED. The key point to achieve the multi-channel measurements is the spatial resolution of the electron optics. The test of the electron optics shows that the designed spatial resolution can be achieved and an image type spin polarimeter with 100 times 100, totally ten thousand channels is possible to be realized. △ Less

Submitted 4 June, 2014; v1 submitted 3 June, 2014; originally announced June 2014.

Comments: submitted to Chinese Physics C

Journal ref: Chinese Physics C Vol. 39, No. 3 (2015) 039001

Quasireplicas and universal lengths of microbial genomes

Authors: Li-Ching Hsieh, Chang-Heng Chang, Liaofu Luo, Fengmin Ji, Hoong-Chien Lee

Abstract: Statistical analysis of distributions of occurrence frequencies of short words in 108 microbial complete genomes reveals the existence of a set of universal "root-sequence lengths" shared by all microbial genomes. These lengths and their universality give powerful clues to the way microbial genomes are grown. We show that the observed genomic properties are explained by a model for genome growth… ▽ More Statistical analysis of distributions of occurrence frequencies of short words in 108 microbial complete genomes reveals the existence of a set of universal "root-sequence lengths" shared by all microbial genomes. These lengths and their universality give powerful clues to the way microbial genomes are grown. We show that the observed genomic properties are explained by a model for genome growth in which primitive genomes grew mainly by maximally stochastic duplications of short segments from an initial length of about 200 nucleotides (nt) to a length of about one million nt typical of microbial genomes. The relevance of the result of this study to the nature of simultaneous random growth and information acquisition by genomes, to the so-called RNA world in which life evolved before the rise of proteins and enzymes and to several other topics are discussed. △ Less

Submitted 30 August, 2003; originally announced September 2003.

Comments: 4 pages 3 figures

Minimal model for genome evolution and growth

Authors: L. C. Hsieh, L. F. Luo, F. M. Ji, H. C. Lee

Abstract: Textual analysis of typical microbial genomes reveals that they have the statistical characteristics of a DNA sequence of a much shorter length. This peculiar property supports an evolutionary model in which a genome evolves by random mutation but primarily grows by random segmental self-copying. That genomes grew mostly by self-copying is consistent with the observation that repeat sequences in… ▽ More Textual analysis of typical microbial genomes reveals that they have the statistical characteristics of a DNA sequence of a much shorter length. This peculiar property supports an evolutionary model in which a genome evolves by random mutation but primarily grows by random segmental self-copying. That genomes grew mostly by self-copying is consistent with the observation that repeat sequences in all genomes are widespread and intragenomic and intergenomic homologous genes are preponderance across all life forms. The model predicates the coexistence of the two competing modes of evolution: the gradual changes of classical Darwinism and the stochastic spurts envisioned in ``punctuated equilibrium''. △ Less

Submitted 11 June, 2002; originally announced June 2002.

Comments: gzip file (LaTeX source and 5 .ps file for figures), 4 pages, 5 figures, 1 table