Search Results for "sourceforge.net"
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Showing 18 open source projects for "sourceforge.net"
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AtomProbeLab
Matlab-based analysis of Atom Probe Data
...If you are looking for Dan Haley's "weights" program, go here https://sourceforge.net/projects/apttools/files/extras/ -
2
ReViMS
ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy
...It provides a number of tools for: (a) segmenting z-stacks of fluorescence images; (b) reconstructing the 3D surface of the aggregates and estimating several features (including the volume). ReViMS is written in MATLAB (The MathWorks, Inc., Massachusetts, USA). It is an open-source tool and the source code is freely available at: http://sourceforge.net/p/revims Requirements: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions. -
3
ESP3
Fisheries acoustics data processing software
...The software allows calibration and echo-integration and a number of algorithms are coded in, including bad pings identification, automated bottom detection, single targets identification and tracking, schools identification, etc. Installation instructions and more informations can be found here: https://sourceforge.net/p/esp3/wiki/ESP3/ # Contacts Yoann Ladroit, NIWA Yoann.ladroit@niwa.co.nz Pablo Escobar-Flores, NIWA Pablo.Escobar@niwa.co.nz -
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RAFTS³G
Rapid Alignment Free Tool for Sequences Similarity Search to Groups
| RAFTS3G - Rapid Alignment Free Tool for Sequences Similarity Search to Groups| % Clustering algoritm to create homology clusters based on RAFTS3 (VIALLE, R. A.) % More informations about RAFTS3 in: https://sourceforge.net/projects/rafts3/ % Professional and Technical Education Sector from the Federal University of Paraná - Bioinformatic Lab. % Federal of Paraná University - UFPR % Dr. Alcides Vieira Arco-verde street, 1225 % CEP: 81520-260 Jardim das Américas % Curitiba – PR % Brazil % % Developers and colaborators: % Roberto T. ... -
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Relative Overestimation VOP
VOP compression for MRI with overestimation control
...Prefer R2018b or newer. ***** This work is outdated and is here for reference purpose, only. ***** If you are looking for improved SAR-compression algorithms, visit: https://sourceforge.net/projects/enhanced-sar-compression/ -
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CorThiZon
Cortical Thickness of brain by Zones
...If you use this toolbox, please reference: ‘Early diagnostic of Alzheimer’s disease using cortical thickness: impact of cognitive reserve', Querbes O, Aubry F, Pariente J, Lotterie JA, Démonet JF, Duret V, Puel M, Berry I, Fort JC, Celsis P, Alzheimer’s Disease Neuroimaging Initiative, Brain, 2009 Aug, 132(Pt 8):2036-47 A footnote giving the link to: http://sourceforge.net/projects/corthizon/ will be appreciated. -
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detectMITE
Detection of Miniature Inverted Repeat Transposable Elements
...id=10.1371/journal.pone.0113349 [3] detectMITE user manual Please visit the Wiki page of this website. [4] detectMITE Q&A For Q&A, please visit the Blog page of this website. [5] Update history To see the update history, go to https://sourceforge.net/p/detectmite/wiki/UpdateHistory/ -
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All future developments will be implemented in the new MATLAB toolbox SciXMiner, please visit https://sourceforge.net/projects/scixminer/ to download the newest version. The former Matlab toolbox Gait-CAD was designed for the visualization and analysis of time series and features with a special focus to data mining problems including classification, regression, and clustering.
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PB-sQF_BacterialTyping
Bacterial Typing from either assembled or raw short reads file
...The input file is the k-mer counts of the unknown assembled genome sequence or raw short reads file in decimal format generated by KAnalyze developed by P. Audano et al. (https://sourceforge.net/projects/kanalyze/). The download included the library index, the library name and sample unknowns. -
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detectIR
Detection of Perfect and Imperfect Inverted Repeats
... [5] detectIR bug report You can report a bug as a Ticket request, or start a topic session in the Discussion webpage of this website. [6] Update history To see the update history, go to https://sourceforge.net/p/detectir/wiki/Update%20History/ -
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ApproxAdderLib
Library of Approximate Adders
We provide MATLAB and Verilog Models of GeAr, and previously proposed adders (ACA-I, ETAII, ACA-II and GDA) at http://sourceforge.net/projects/approxadderlib/ GeAr is a low latency Generic Accuracy Configurable Adder that provides a higher number of potential configurations compared to state-of-the-art approximate adders, thus enabling a high degree of flexibility and trade-off between performance and output quality. These MATALB and Verilog models can allow software programmer as well as hardware designers to evaluate their code and design. ... -
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C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
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OpenFlux2 is an extended version of OpenFLUX (https://sourceforge.net/projects/openflux/) - the modern MATLAB-based modelling software for 13C flux analysis (MFA). The following features were implemented in OpenFLUX2, which were not present in original software: integrated support for calculation and analysis of parallel labeling experiments (PLE), extended statistical analysis of parameter estimation results, calculation of fluxes and measurements correlation, structural identifiability analysis and elements of experimental design.
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Constrained Manipulation Planning Suite
openrave plugins for constrained manipulation
...It has been tested on all Ubuntu version from the last few years and will probably work with most modern linux distributions. Please see the wiki for installation and examples: https://sourceforge.net/p/comps/wiki/Home/ -
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Matlab VideoUtils
Matlab Toolbox for reading and writing videos.
...In order to stay tuned for updates, you can follow the Matlab VideoUtils on Twitter (@VideoUtils): https://twitter.com/#!/VideoUtils If anyone is interested in collaborate, please contact to me -> https://sourceforge.net/sendmessage.php?touser=3811831 -
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...This tool lets the identification of nonlinear discrete causal systems that can be approximated with the Volterra-Wiener series. Please see NEW ADVANCE in Volterra series identification: https://sourceforge.net/projects/volterra20/?source=directory
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Ctrax is now hosted on Sourceforge (http://sourceforge.net/projects/ctrax). This Berlios site will no longer be maintained.
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The collection of MATLAB compatible routines for Mechanical Trading Systems. Released ta-lib - MATLAB MEX API to www.ta-lib.org . Related projects: http://sourceforge.net/projects/wlmllink and http://sourceforge.net/projects/algotrade.
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